RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CNKSR1Q969H4 720 aa15.34■□□□□ 0.05
CTNNA1-234ENST00000522227 POLKQ9UBT6 870 aa15.34■□□□□ 0.05
CTNNA1-234ENST00000522227 ZNF330Q9Y3S2 320 aaPredicted RBP15.34■□□□□ 0.05
CTNNA1-234ENST00000522227 ADAMTSL1Q8N6G6 1762 aa15.34■□□□□ 0.05
CTNNA1-234ENST00000522227 CARD14Q9BXL6 1004 aa15.33■□□□□ 0.04
CTNNA1-234ENST00000522227 LTBP1Q14766 1721 aa15.33■□□□□ 0.04
CTNNA1-234ENST00000522227 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
CTNNA1-234ENST00000522227 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
CTNNA1-234ENST00000522227 GJA3Q9Y6H8 435 aa15.32■□□□□ 0.04
CTNNA1-234ENST00000522227 ANKRD26Q9UPS8 1709 aa15.31■□□□□ 0.04
CTNNA1-234ENST00000522227 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
CTNNA1-234ENST00000522227 SOGA3Q5TF21 947 aa15.31■□□□□ 0.04
CTNNA1-234ENST00000522227 CST9Q5W186 159 aa15.31■□□□□ 0.04
CTNNA1-234ENST00000522227 PDZRN3Q9UPQ7 1066 aa15.31■□□□□ 0.04
CTNNA1-234ENST00000522227 MAP2K2P36507 400 aa15.3■□□□□ 0.04
CTNNA1-234ENST00000522227 AMOTQ4VCS5 1084 aa15.3■□□□□ 0.04
CTNNA1-234ENST00000522227 STYK1Q6J9G0 422 aa15.3■□□□□ 0.04
CTNNA1-234ENST00000522227 TLL2Q9Y6L7 1015 aa15.3■□□□□ 0.04
CTNNA1-234ENST00000522227 SRGNP10124 158 aa15.29■□□□□ 0.04
CTNNA1-234ENST00000522227 FKBP4Q02790 459 aaKnown RBP eCLIP15.29■□□□□ 0.04
CTNNA1-234ENST00000522227 CIAPIN1Q6FI81 312 aa15.29■□□□□ 0.04
CTNNA1-234ENST00000522227 AEBP1Q8IUX7 1158 aa15.29■□□□□ 0.04
CTNNA1-234ENST00000522227 CNBD1Q8NA66 436 aa15.29■□□□□ 0.04
CTNNA1-234ENST00000522227 MASTLQ96GX5 879 aa15.29■□□□□ 0.04
CTNNA1-234ENST00000522227 TBC1D2BQ9UPU7 963 aa15.29■□□□□ 0.04
CTNNA1-234ENST00000522227 CA12O43570 354 aa15.28■□□□□ 0.04
CTNNA1-234ENST00000522227 LMOD1P29536 600 aaPredicted RBP15.27■□□□□ 0.04
CTNNA1-234ENST00000522227 EPS15P42566 896 aa15.27■□□□□ 0.04
CTNNA1-234ENST00000522227 ST5P78524 1137 aa15.27■□□□□ 0.04
CTNNA1-234ENST00000522227 LGR6Q9HBX8 967 aa15.27■□□□□ 0.04
CTNNA1-234ENST00000522227 IARSP41252 1262 aaKnown RBP15.26■□□□□ 0.03
CTNNA1-234ENST00000522227 GPC2Q8N158 579 aa15.26■□□□□ 0.03
CTNNA1-234ENST00000522227 C7orf43Q8WVR3 580 aa15.26■□□□□ 0.03
CTNNA1-234ENST00000522227 ZNF408Q9H9D4 720 aa15.26■□□□□ 0.03
CTNNA1-234ENST00000522227 SLC52A2Q9HAB3 445 aa15.26■□□□□ 0.03
CTNNA1-234ENST00000522227 FZD9O00144 591 aa15.25■□□□□ 0.03
CTNNA1-234ENST00000522227 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
CTNNA1-234ENST00000522227 CELF2O95319 508 aaKnown RBP15.25■□□□□ 0.03
CTNNA1-234ENST00000522227 SYNE4Q8N205 404 aa15.25■□□□□ 0.03
CTNNA1-234ENST00000522227 ZIC5Q96T25 663 aa15.25■□□□□ 0.03
CTNNA1-234ENST00000522227 SETDB2Q96T68 719 aa15.25■□□□□ 0.03
CTNNA1-234ENST00000522227 A0A087WZG4 1122 aa15.24■□□□□ 0.03
CTNNA1-234ENST00000522227 EIF5P55010 431 aaKnown RBP15.24■□□□□ 0.03
CTNNA1-234ENST00000522227 BRPF1P55201 1214 aaPredicted RBP15.24■□□□□ 0.03
CTNNA1-234ENST00000522227 TRPM7Q96QT4 1865 aa15.24■□□□□ 0.03
CTNNA1-234ENST00000522227 EIF6P56537 245 aaKnown RBP15.23■□□□□ 0.03
CTNNA1-234ENST00000522227 SAPCD2Q86UD0 394 aa15.23■□□□□ 0.03
CTNNA1-234ENST00000522227 JDP2Q8WYK2 163 aa15.23■□□□□ 0.03
CTNNA1-234ENST00000522227 SULT6B1Q6IMI4 303 aa15.22■□□□□ 0.03
CTNNA1-234ENST00000522227 SCN11AQ9UI33 1791 aa15.21■□□□□ 0.03
CTNNA1-234ENST00000522227 STARD3NLO95772 234 aa15.21■□□□□ 0.03
CTNNA1-234ENST00000522227 SCNN1DP51172 638 aa15.21■□□□□ 0.03
CTNNA1-234ENST00000522227 RTKN2Q8IZC4 609 aa15.21■□□□□ 0.03
CTNNA1-234ENST00000522227 ARFGEF2Q9Y6D5 1785 aa15.21■□□□□ 0.02
CTNNA1-234ENST00000522227 FAM177BA6PVY3 158 aa15.2■□□□□ 0.02
CTNNA1-234ENST00000522227 RNMTO43148 476 aaKnown RBP15.2■□□□□ 0.02
CTNNA1-234ENST00000522227 NPR1P16066 1061 aa15.2■□□□□ 0.02
CTNNA1-234ENST00000522227 AKAP4Q5JQC9 854 aa15.2■□□□□ 0.02
CTNNA1-234ENST00000522227 GLIS2Q9BZE0 524 aaPredicted RBP15.2■□□□□ 0.02
CTNNA1-234ENST00000522227 USP50Q70EL3 339 aaPredicted RBP15.19■□□□□ 0.02
CTNNA1-234ENST00000522227 NPM2Q86SE8 214 aaKnown RBP15.19■□□□□ 0.02
CTNNA1-234ENST00000522227 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
CTNNA1-234ENST00000522227 POLR3GLQ9BT43 218 aa15.18■□□□□ 0.02
CTNNA1-234ENST00000522227 SCN7AQ01118 1682 aa15.18■□□□□ 0.02
CTNNA1-234ENST00000522227 CAMTA2O94983 1202 aa15.17■□□□□ 0.02
CTNNA1-234ENST00000522227 CDCA8Q53HL2 280 aa15.17■□□□□ 0.02
CTNNA1-234ENST00000522227 VSIG10Q8N0Z9 540 aa15.17■□□□□ 0.02
CTNNA1-234ENST00000522227 COL4A5P29400 1685 aa15.16■□□□□ 0.02
CTNNA1-234ENST00000522227 TRPA1O75762 1119 aa15.16■□□□□ 0.02
CTNNA1-234ENST00000522227 A1BGP04217 495 aa15.16■□□□□ 0.02
CTNNA1-234ENST00000522227 PIP4K2AP48426 406 aaPredicted RBP15.16■□□□□ 0.02
CTNNA1-234ENST00000522227 NOGQ13253 232 aa15.16■□□□□ 0.02
CTNNA1-234ENST00000522227 HABP4Q5JVS0 413 aaKnown RBP15.16■□□□□ 0.02
CTNNA1-234ENST00000522227 TTC5Q8N0Z6 440 aa15.16■□□□□ 0.02
CTNNA1-234ENST00000522227 LARGE2Q8N3Y3 721 aa15.16■□□□□ 0.02
CTNNA1-234ENST00000522227 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
CTNNA1-234ENST00000522227 DZIP3Q86Y13 1208 aaKnown RBP15.15■□□□□ 0.02
CTNNA1-234ENST00000522227 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
CTNNA1-234ENST00000522227 TCERG1O14776 1098 aaKnown RBP15.14■□□□□ 0.01
CTNNA1-234ENST00000522227 HUNKP57058 714 aa15.14■□□□□ 0.01
CTNNA1-234ENST00000522227 DLK2Q6UY11 383 aa15.14■□□□□ 0.01
CTNNA1-234ENST00000522227 HHIPL1Q96JK4 782 aa15.14■□□□□ 0.01
CTNNA1-234ENST00000522227 ADARB2Q9NS39 739 aaKnown RBP15.14■□□□□ 0.01
CTNNA1-234ENST00000522227 CTU1Q7Z7A3 348 aaKnown RBP15.13■□□□□ 0.01
CTNNA1-234ENST00000522227 SLC51AQ86UW1 340 aa15.13■□□□□ 0.01
CTNNA1-234ENST00000522227 ZNF496Q96IT1 587 aaPredicted RBP15.13■□□□□ 0.01
CTNNA1-234ENST00000522227 HPS5Q9UPZ3 1129 aa15.13■□□□□ 0.01
CTNNA1-234ENST00000522227 IL6STP40189 918 aaPredicted RBP15.12■□□□□ 0.01
CTNNA1-234ENST00000522227 KIF23Q02241 960 aaPredicted RBP15.12■□□□□ 0.01
CTNNA1-234ENST00000522227 PSMD1Q99460 953 aa15.12■□□□□ 0.01
CTNNA1-234ENST00000522227 RNF186Q9NXI6 227 aa15.12■□□□□ 0.01
CTNNA1-234ENST00000522227 MRC1P22897 1456 aa15.12■□□□□ 0.01
CTNNA1-234ENST00000522227 HMOX1P09601 288 aa15.11■□□□□ 0.01
CTNNA1-234ENST00000522227 ALDH1B1P30837 517 aa15.11■□□□□ 0.01
CTNNA1-234ENST00000522227 NIM1KQ8IY84 436 aa15.11■□□□□ 0.01
CTNNA1-234ENST00000522227 GPRC5DQ9NZD1 345 aa15.11■□□□□ 0.01
CTNNA1-234ENST00000522227 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
CTNNA1-234ENST00000522227 USP48Q86UV5 1035 aa15.1■□□□□ 0.01
CTNNA1-234ENST00000522227 NIP7Q9Y221 180 aaKnown RBP eCLIP15.1■□□□□ 0.01
CTNNA1-234ENST00000522227 HEG1Q9ULI3 1381 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms