RNA–Protein interactions for RNA: ENST00000522183.1

CASC9-203, Transcript of cancer susceptibility 9, humanhuman

TSL 3

Gene CASC9, Length 833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-203ENST00000522183 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
CASC9-203ENST00000522183 DZIP3Q86Y13 1208 aaKnown RBP17.13■□□□□ 0.33
CASC9-203ENST00000522183 DPY19L2Q6NUT2 758 aa17.12■□□□□ 0.33
CASC9-203ENST00000522183 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
CASC9-203ENST00000522183 PRPF40BQ6NWY9 871 aaKnown RBP17.11■□□□□ 0.33
CASC9-203ENST00000522183 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
CASC9-203ENST00000522183 TAOK3Q9H2K8 898 aa17.11■□□□□ 0.33
CASC9-203ENST00000522183 NUDCQ9Y266 331 aa17.11■□□□□ 0.33
CASC9-203ENST00000522183 USP16Q9Y5T5 823 aa17.11■□□□□ 0.33
CASC9-203ENST00000522183 PRAMEF22A3QJZ6 481 aa17.1■□□□□ 0.33
CASC9-203ENST00000522183 POTECB2RU33 542 aa17.1■□□□□ 0.33
CASC9-203ENST00000522183 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
CASC9-203ENST00000522183 SRGNP10124 158 aa17.1■□□□□ 0.33
CASC9-203ENST00000522183 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
CASC9-203ENST00000522183 MCM10Q7L590 875 aa17.1■□□□□ 0.33
CASC9-203ENST00000522183 RTF1Q92541 710 aaKnown RBP17.1■□□□□ 0.33
CASC9-203ENST00000522183 LTBP3Q9NS15 1303 aa17.1■□□□□ 0.33
CASC9-203ENST00000522183 COL13A1Q5TAT6 717 aaPredicted RBP17.09■□□□□ 0.33
CASC9-203ENST00000522183 NBPF5PQ86XG9 351 aaPredicted RBP17.09■□□□□ 0.33
CASC9-203ENST00000522183 LAMB4A4D0S4 1761 aa17.08■□□□□ 0.33
CASC9-203ENST00000522183 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.32
CASC9-203ENST00000522183 MASTLQ96GX5 879 aa17.08■□□□□ 0.32
CASC9-203ENST00000522183 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.32
CASC9-203ENST00000522183 PPP2R1AP30153 589 aa17.07■□□□□ 0.32
CASC9-203ENST00000522183 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
CASC9-203ENST00000522183 SOGA3Q5TF21 947 aa17.07■□□□□ 0.32
CASC9-203ENST00000522183 CLEC4GQ6UXB4 293 aa17.06■□□□□ 0.32
CASC9-203ENST00000522183 DDNO94850 711 aaPredicted RBP17.05■□□□□ 0.32
CASC9-203ENST00000522183 NIP7Q9Y221 180 aaKnown RBP eCLIP17.05■□□□□ 0.32
CASC9-203ENST00000522183 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
CASC9-203ENST00000522183 NPR1P16066 1061 aa17.04■□□□□ 0.32
CASC9-203ENST00000522183 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
CASC9-203ENST00000522183 CHADLQ6NUI6 762 aa17.04■□□□□ 0.32
CASC9-203ENST00000522183 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
CASC9-203ENST00000522183 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
CASC9-203ENST00000522183 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
CASC9-203ENST00000522183 FAM177BA6PVY3 158 aa17.03■□□□□ 0.32
CASC9-203ENST00000522183 POTEIP0CG38 1075 aa17.03■□□□□ 0.32
CASC9-203ENST00000522183 POTEJP0CG39 1038 aa17.03■□□□□ 0.32
CASC9-203ENST00000522183 HSPA1AP0DMV8 641 aaKnown RBP17.03■□□□□ 0.32
CASC9-203ENST00000522183 HSPA1BP0DMV9 641 aaKnown RBP17.03■□□□□ 0.32
CASC9-203ENST00000522183 SCN4AP35499 1836 aa17.03■□□□□ 0.32
CASC9-203ENST00000522183 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.32
CASC9-203ENST00000522183 HTATSF1O43719 755 aaKnown RBP17.02■□□□□ 0.32
CASC9-203ENST00000522183 TPTE2Q6XPS3 522 aa17.02■□□□□ 0.32
CASC9-203ENST00000522183 TNS4Q8IZW8 715 aa17.02■□□□□ 0.32
CASC9-203ENST00000522183 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
CASC9-203ENST00000522183 RGL2O15211 777 aa17.01■□□□□ 0.31
CASC9-203ENST00000522183 CAPN15O75808 1086 aa17.01■□□□□ 0.31
CASC9-203ENST00000522183 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
CASC9-203ENST00000522183 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
CASC9-203ENST00000522183 KLRG2A4D1S0 409 aaPredicted RBP17■□□□□ 0.31
CASC9-203ENST00000522183 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
CASC9-203ENST00000522183 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
CASC9-203ENST00000522183 HLFQ16534 295 aa17■□□□□ 0.31
CASC9-203ENST00000522183 OLFM4Q6UX06 510 aa17■□□□□ 0.31
CASC9-203ENST00000522183 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
CASC9-203ENST00000522183 CREBZFQ9NS37 354 aa17■□□□□ 0.31
CASC9-203ENST00000522183 NUP98P52948 1817 aa16.99■□□□□ 0.31
CASC9-203ENST00000522183 GTF2E1P29083 439 aaPredicted RBP16.99■□□□□ 0.31
CASC9-203ENST00000522183 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
CASC9-203ENST00000522183 ZNF541Q9H0D2 1346 aa16.98■□□□□ 0.31
CASC9-203ENST00000522183 NEFMP07197 916 aa16.98■□□□□ 0.31
CASC9-203ENST00000522183 LDHDQ86WU2 507 aa16.98■□□□□ 0.31
CASC9-203ENST00000522183 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
CASC9-203ENST00000522183 TAF1DQ9H5J8 278 aaPredicted RBP16.98■□□□□ 0.31
CASC9-203ENST00000522183 MKRN1Q9UHC7 482 aaKnown RBP16.98■□□□□ 0.31
CASC9-203ENST00000522183 RTKN2Q8IZC4 609 aa16.97■□□□□ 0.31
CASC9-203ENST00000522183 ABCC12Q96J65 1359 aa16.97■□□□□ 0.31
CASC9-203ENST00000522183 ALDH1B1P30837 517 aa16.96■□□□□ 0.31
CASC9-203ENST00000522183 PNISRQ8TF01 805 aaKnown RBP16.96■□□□□ 0.31
CASC9-203ENST00000522183 ADAMTSL1Q8N6G6 1762 aa16.95■□□□□ 0.3
CASC9-203ENST00000522183 IARSP41252 1262 aaKnown RBP16.95■□□□□ 0.3
CASC9-203ENST00000522183 EAPPQ56P03 285 aaPredicted RBP16.95■□□□□ 0.3
CASC9-203ENST00000522183 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
CASC9-203ENST00000522183 NUTM1Q86Y26 1132 aa16.95■□□□□ 0.3
CASC9-203ENST00000522183 NYXQ9GZU5 481 aa16.95■□□□□ 0.3
CASC9-203ENST00000522183 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
CASC9-203ENST00000522183 PASKQ96RG2 1323 aa16.95■□□□□ 0.3
CASC9-203ENST00000522183 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
CASC9-203ENST00000522183 SYNE4Q8N205 404 aa16.94■□□□□ 0.3
CASC9-203ENST00000522183 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
CASC9-203ENST00000522183 SNED1Q8TER0 1413 aa16.94■□□□□ 0.3
CASC9-203ENST00000522183 MAP3K15Q6ZN16 1313 aa16.94■□□□□ 0.3
CASC9-203ENST00000522183 ERVV-1B6SEH8 477 aa16.93■□□□□ 0.3
CASC9-203ENST00000522183 MYL6BP14649 208 aa16.93■□□□□ 0.3
CASC9-203ENST00000522183 GPTP24298 496 aa16.93■□□□□ 0.3
CASC9-203ENST00000522183 EIF4A1P60842 406 aaKnown RBP16.93■□□□□ 0.3
CASC9-203ENST00000522183 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
CASC9-203ENST00000522183 TTLL7Q6ZT98 887 aa16.93■□□□□ 0.3
CASC9-203ENST00000522183 THUMPD2Q9BTF0 503 aaKnown RBP16.93■□□□□ 0.3
CASC9-203ENST00000522183 CLEC11AQ9Y240 323 aa16.93■□□□□ 0.3
CASC9-203ENST00000522183 RNF123Q5XPI4 1314 aa16.93■□□□□ 0.3
CASC9-203ENST00000522183 EPHX2P34913 555 aa16.92■□□□□ 0.3
CASC9-203ENST00000522183 NFE2L2Q16236 605 aa16.92■□□□□ 0.3
CASC9-203ENST00000522183 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
CASC9-203ENST00000522183 ZBTB3Q9H5J0 574 aa16.92■□□□□ 0.3
CASC9-203ENST00000522183 RIC1Q4ADV7 1423 aa16.92■□□□□ 0.3
CASC9-203ENST00000522183 IBTKQ9P2D0 1353 aaPredicted RBP16.91■□□□□ 0.3
CASC9-203ENST00000522183 FZD9O00144 591 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms