RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 LARGE1O95461 756 aa14.66□□□□□ -0.06
DENND3-217ENST00000521835 SNX14Q9Y5W7 946 aa14.66□□□□□ -0.06
DENND3-217ENST00000521835 RNMTO43148 476 aaKnown RBP14.66□□□□□ -0.06
DENND3-217ENST00000521835 FAM227BQ96M60 508 aa14.66□□□□□ -0.06
DENND3-217ENST00000521835 DBF4Q9UBU7 674 aaPredicted RBP14.66□□□□□ -0.06
DENND3-217ENST00000521835 ATP5J2-PTCD1G3V325 749 aa14.65□□□□□ -0.06
DENND3-217ENST00000521835 PTCD1O75127 700 aaKnown RBP14.65□□□□□ -0.06
DENND3-217ENST00000521835 CCDC173Q0VFZ6 552 aa14.65□□□□□ -0.06
DENND3-217ENST00000521835 ADCK5Q3MIX3 580 aa14.65□□□□□ -0.06
DENND3-217ENST00000521835 BICC1Q9H694 974 aaKnown RBP14.65□□□□□ -0.06
DENND3-217ENST00000521835 SMC3Q9UQE7 1217 aa14.65□□□□□ -0.06
DENND3-217ENST00000521835 PIK3C2AO00443 1686 aa14.65□□□□□ -0.06
DENND3-217ENST00000521835 PROSER2Q86WR7 435 aaPredicted RBP14.65□□□□□ -0.06
DENND3-217ENST00000521835 SGSM2O43147 1006 aa14.65□□□□□ -0.06
DENND3-217ENST00000521835 COL9A3Q14050 684 aaPredicted RBP14.65□□□□□ -0.06
DENND3-217ENST00000521835 SUCLG2Q96I99 432 aa14.65□□□□□ -0.06
DENND3-217ENST00000521835 FSD1Q9BTV5 496 aa14.65□□□□□ -0.06
DENND3-217ENST00000521835 KIF13AQ9H1H9 1805 aa14.64□□□□□ -0.07
DENND3-217ENST00000521835 CHGBP05060 677 aa14.64□□□□□ -0.07
DENND3-217ENST00000521835 G3BP1Q13283 466 aaKnown RBP eCLIP14.64□□□□□ -0.07
DENND3-217ENST00000521835 AKAP4Q5JQC9 854 aa14.64□□□□□ -0.07
DENND3-217ENST00000521835 FAM173BQ6P4H8 233 aa14.64□□□□□ -0.07
DENND3-217ENST00000521835 USP48Q86UV5 1035 aa14.64□□□□□ -0.07
DENND3-217ENST00000521835 RAPGEF4Q8WZA2 1011 aa14.64□□□□□ -0.07
DENND3-217ENST00000521835 MYD88Q99836 296 aa14.64□□□□□ -0.07
DENND3-217ENST00000521835 NFATC2IPQ8NCF5 419 aa14.64□□□□□ -0.07
DENND3-217ENST00000521835 DNAJC5Q9H3Z4 198 aa14.64□□□□□ -0.07
DENND3-217ENST00000521835 ADCY9O60503 1353 aa14.63□□□□□ -0.07
DENND3-217ENST00000521835 RAB11FIP3O75154 756 aa14.63□□□□□ -0.07
DENND3-217ENST00000521835 BRD1O95696 1058 aa14.63□□□□□ -0.07
DENND3-217ENST00000521835 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
DENND3-217ENST00000521835 STAP2Q9UGK3 403 aa14.63□□□□□ -0.07
DENND3-217ENST00000521835 GIGYF1O75420 1035 aaPredicted RBP14.63□□□□□ -0.07
DENND3-217ENST00000521835 ISY1Q9ULR0 285 aaKnown RBP14.63□□□□□ -0.07
DENND3-217ENST00000521835 GLRX3O76003 335 aaKnown RBP14.62□□□□□ -0.07
DENND3-217ENST00000521835 HSPA4P34932 840 aa14.62□□□□□ -0.07
DENND3-217ENST00000521835 KRT28Q7Z3Y7 464 aa14.62□□□□□ -0.07
DENND3-217ENST00000521835 KCNH5Q8NCM2 988 aa14.62□□□□□ -0.07
DENND3-217ENST00000521835 RAD50Q92878 1312 aa14.62□□□□□ -0.07
DENND3-217ENST00000521835 MCM2P49736 904 aa14.62□□□□□ -0.07
DENND3-217ENST00000521835 RUFY3Q7L099 469 aa14.62□□□□□ -0.07
DENND3-217ENST00000521835 XAGE3Q8WTP9 111 aa14.62□□□□□ -0.07
DENND3-217ENST00000521835 GPATCH3Q96I76 525 aa14.62□□□□□ -0.07
DENND3-217ENST00000521835 ECHDC1Q9NTX5 307 aa14.62□□□□□ -0.07
DENND3-217ENST00000521835 COPS6Q7L5N1 327 aa14.61□□□□□ -0.07
DENND3-217ENST00000521835 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
DENND3-217ENST00000521835 PXDNQ92626 1479 aa14.61□□□□□ -0.07
DENND3-217ENST00000521835 LSG1Q9H089 658 aaKnown RBP14.61□□□□□ -0.07
DENND3-217ENST00000521835 PDRG1Q9NUG6 133 aa14.61□□□□□ -0.07
DENND3-217ENST00000521835 R3HCC1Q9Y3T6 440 aaKnown RBP14.61□□□□□ -0.07
DENND3-217ENST00000521835 GRM8O00222 908 aa14.61□□□□□ -0.07
DENND3-217ENST00000521835 POLA2Q14181 598 aa14.61□□□□□ -0.07
DENND3-217ENST00000521835 EAF2Q96CJ1 260 aaPredicted RBP14.61□□□□□ -0.07
DENND3-217ENST00000521835 CCDC85AQ96PX6 553 aaPredicted RBP14.61□□□□□ -0.07
DENND3-217ENST00000521835 NMIQ13287 307 aaPredicted RBP14.6□□□□□ -0.07
DENND3-217ENST00000521835 KSR2Q6VAB6 950 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 TAF6LQ9Y6J9 622 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 RGPD1P0DJD0 1748 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 GJB2P29033 226 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 ZNF445P59923 1031 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 HSP90AB4PQ58FF6 505 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 UBE3BQ7Z3V4 1068 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 ZSCAN30Q86W11 494 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 LRRC2Q9BYS8 371 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 TOPAZ1Q8N9V7 1692 aa14.6□□□□□ -0.07
DENND3-217ENST00000521835 WDR33Q9C0J8 1336 aaKnown RBP14.6□□□□□ -0.07
DENND3-217ENST00000521835 FMN2Q9NZ56 1722 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 SYT1P21579 422 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 LRSAM1Q6UWE0 723 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 ANAPC15P60006 121 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 DNM1Q05193 864 aaKnown RBP14.59□□□□□ -0.07
DENND3-217ENST00000521835 NEXNQ0ZGT2 675 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 TSPY26PQ9H489 355 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 USP25Q9UHP3 1055 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 RBM8AQ9Y5S9 174 aaKnown RBP14.59□□□□□ -0.07
DENND3-217ENST00000521835 A0A0G2JS52 829 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 STX6O43752 255 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 DDX58O95786 925 aaKnown RBP14.59□□□□□ -0.07
DENND3-217ENST00000521835 HCLS1P14317 486 aaPredicted RBP14.59□□□□□ -0.07
DENND3-217ENST00000521835 SLFNL1Q499Z3 407 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 DNTTIP2Q5QJE6 756 aaKnown RBP14.59□□□□□ -0.07
DENND3-217ENST00000521835 TTC5Q8N0Z6 440 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 LIMCH1Q9UPQ0 1083 aa14.59□□□□□ -0.07
DENND3-217ENST00000521835 A0A0D9SFI3 127 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 MBD3O95983 291 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 ZKSCAN1P17029 563 aaPredicted RBP14.58□□□□□ -0.08
DENND3-217ENST00000521835 CCDC129Q6ZRS4 1044 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 ARHGEF25Q86VW2 580 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 RUFY2Q8WXA3 655 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 CUL4AQ13619 759 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 GIMAP6Q6P9H5 292 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 CLEC17AQ6ZS10 378 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 ZNF496Q96IT1 587 aaPredicted RBP14.58□□□□□ -0.08
DENND3-217ENST00000521835 PDCL3Q9H2J4 239 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 USP16Q9Y5T5 823 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 CYP46A1Q9Y6A2 500 aa14.58□□□□□ -0.08
DENND3-217ENST00000521835 GTF2E1P29083 439 aaPredicted RBP14.57□□□□□ -0.08
DENND3-217ENST00000521835 NEUROD6Q96NK8 337 aa14.57□□□□□ -0.08
DENND3-217ENST00000521835 SASH1O94885 1247 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms