RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 L3MBTL3Q96JM7 780 aaPredicted RBP15.49■□□□□ 0.07
IGHV3-60-201ENST00000521678 RGL2O15211 777 aa15.48■□□□□ 0.07
IGHV3-60-201ENST00000521678 ST5P78524 1137 aa15.48■□□□□ 0.07
IGHV3-60-201ENST00000521678 DZIP3Q86Y13 1208 aaKnown RBP15.48■□□□□ 0.07
IGHV3-60-201ENST00000521678 ZNF330Q9Y3S2 320 aaPredicted RBP15.48■□□□□ 0.07
IGHV3-60-201ENST00000521678 FER1L6Q2WGJ9 1857 aa15.48■□□□□ 0.07
IGHV3-60-201ENST00000521678 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
IGHV3-60-201ENST00000521678 BTBD11A6QL63 1104 aa15.47■□□□□ 0.07
IGHV3-60-201ENST00000521678 CCDC88AQ3V6T2 1871 aa15.47■□□□□ 0.07
IGHV3-60-201ENST00000521678 NPM2Q86SE8 214 aaKnown RBP15.47■□□□□ 0.07
IGHV3-60-201ENST00000521678 TIAM2Q8IVF5 1701 aa15.46■□□□□ 0.07
IGHV3-60-201ENST00000521678 IQCA1LA6NCM1 817 aa15.46■□□□□ 0.07
IGHV3-60-201ENST00000521678 ITGBL1O95965 494 aaPredicted RBP15.46■□□□□ 0.07
IGHV3-60-201ENST00000521678 NPR1P16066 1061 aa15.46■□□□□ 0.07
IGHV3-60-201ENST00000521678 LDHDQ86WU2 507 aa15.46■□□□□ 0.07
IGHV3-60-201ENST00000521678 CCER1Q8TC90 406 aaPredicted RBP15.46■□□□□ 0.07
IGHV3-60-201ENST00000521678 RSPH6AQ9H0K4 717 aa15.46■□□□□ 0.07
IGHV3-60-201ENST00000521678 TAF1DQ9H5J8 278 aaPredicted RBP15.46■□□□□ 0.07
IGHV3-60-201ENST00000521678 SCN7AQ01118 1682 aa15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 NBPF26B4DH59 902 aa15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 SNRPA1P09661 255 aaKnown RBP15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 NBPF10Q6P3W6 841 aaKnown RBP15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 NBPF5PQ86XG9 351 aaPredicted RBP15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 NBPF15Q8N660 670 aa15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 MKRN1Q9UHC7 482 aaKnown RBP15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 VIRMAQ69YN4 1812 aaKnown RBP15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 SLX4Q8IY92 1834 aa15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 DICER1Q9UPY3 1922 aaKnown RBP15.45■□□□□ 0.06
IGHV3-60-201ENST00000521678 PRAMEF22A3QJZ6 481 aa15.44■□□□□ 0.06
IGHV3-60-201ENST00000521678 PRKAR2BP31323 418 aa15.44■□□□□ 0.06
IGHV3-60-201ENST00000521678 CCDC93Q567U6 631 aa15.44■□□□□ 0.06
IGHV3-60-201ENST00000521678 TPTE2Q6XPS3 522 aa15.44■□□□□ 0.06
IGHV3-60-201ENST00000521678 CNTNAP1P78357 1384 aa15.44■□□□□ 0.06
IGHV3-60-201ENST00000521678 SIPA1L3O60292 1781 aaPredicted RBP15.44■□□□□ 0.06
IGHV3-60-201ENST00000521678 COL11A2P13942 1736 aaPredicted RBP15.43■□□□□ 0.06
IGHV3-60-201ENST00000521678 NPHP1O15259 732 aa15.43■□□□□ 0.06
IGHV3-60-201ENST00000521678 PIP4K2AP48426 406 aaPredicted RBP15.43■□□□□ 0.06
IGHV3-60-201ENST00000521678 FKBP4Q02790 459 aaKnown RBP eCLIP15.43■□□□□ 0.06
IGHV3-60-201ENST00000521678 RTKN2Q8IZC4 609 aa15.42■□□□□ 0.06
IGHV3-60-201ENST00000521678 PRDM10Q9NQV6 1147 aa15.42■□□□□ 0.06
IGHV3-60-201ENST00000521678 ZNF652Q9Y2D9 606 aa15.42■□□□□ 0.06
IGHV3-60-201ENST00000521678 FZD9O00144 591 aa15.41■□□□□ 0.06
IGHV3-60-201ENST00000521678 FOXN1O15353 648 aa15.41■□□□□ 0.06
IGHV3-60-201ENST00000521678 HTATSF1O43719 755 aaKnown RBP15.41■□□□□ 0.06
IGHV3-60-201ENST00000521678 ZNF277Q9NRM2 450 aaPredicted RBP15.41■□□□□ 0.06
IGHV3-60-201ENST00000521678 TMEM88BA6NKF7 163 aa15.4■□□□□ 0.06
IGHV3-60-201ENST00000521678 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
IGHV3-60-201ENST00000521678 VEGFBP49765 207 aa15.4■□□□□ 0.06
IGHV3-60-201ENST00000521678 OLFM4Q6UX06 510 aa15.4■□□□□ 0.06
IGHV3-60-201ENST00000521678 NIP7Q9Y221 180 aaKnown RBP eCLIP15.4■□□□□ 0.06
IGHV3-60-201ENST00000521678 ZNF541Q9H0D2 1346 aa15.4■□□□□ 0.06
IGHV3-60-201ENST00000521678 HLFQ16534 295 aa15.39■□□□□ 0.05
IGHV3-60-201ENST00000521678 MCM10Q7L590 875 aa15.39■□□□□ 0.05
IGHV3-60-201ENST00000521678 SYNE4Q8N205 404 aa15.39■□□□□ 0.05
IGHV3-60-201ENST00000521678 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
IGHV3-60-201ENST00000521678 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
IGHV3-60-201ENST00000521678 HACL1Q9UJ83 578 aa15.39■□□□□ 0.05
IGHV3-60-201ENST00000521678 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
IGHV3-60-201ENST00000521678 EPHX2P34913 555 aa15.38■□□□□ 0.05
IGHV3-60-201ENST00000521678 TAF7Q15545 349 aaPredicted RBP15.38■□□□□ 0.05
IGHV3-60-201ENST00000521678 CRY2Q49AN0 593 aa15.38■□□□□ 0.05
IGHV3-60-201ENST00000521678 PNMA8AQ86V59 439 aaPredicted RBP15.38■□□□□ 0.05
IGHV3-60-201ENST00000521678 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
IGHV3-60-201ENST00000521678 SNED1Q8TER0 1413 aa15.37■□□□□ 0.05
IGHV3-60-201ENST00000521678 RASSF10A6NK89 507 aa15.37■□□□□ 0.05
IGHV3-60-201ENST00000521678 IARSP41252 1262 aaKnown RBP15.37■□□□□ 0.05
IGHV3-60-201ENST00000521678 CTCFP49711 727 aaPredicted RBP15.37■□□□□ 0.05
IGHV3-60-201ENST00000521678 CNGB1Q14028 1251 aaPredicted RBP15.37■□□□□ 0.05
IGHV3-60-201ENST00000521678 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
IGHV3-60-201ENST00000521678 CNTROBQ8N137 903 aa15.37■□□□□ 0.05
IGHV3-60-201ENST00000521678 GPC2Q8N158 579 aa15.37■□□□□ 0.05
IGHV3-60-201ENST00000521678 PSMD1Q99460 953 aa15.37■□□□□ 0.05
IGHV3-60-201ENST00000521678 SCN4AP35499 1836 aa15.36■□□□□ 0.05
IGHV3-60-201ENST00000521678 ERVV-1B6SEH8 477 aa15.36■□□□□ 0.05
IGHV3-60-201ENST00000521678 U2AF1L5P0DN76 240 aaPredicted RBP15.36■□□□□ 0.05
IGHV3-60-201ENST00000521678 HOXA10P31260 410 aaPredicted RBP15.36■□□□□ 0.05
IGHV3-60-201ENST00000521678 U2AF1Q01081 240 aaKnown RBP eCLIP15.36■□□□□ 0.05
IGHV3-60-201ENST00000521678 CC2D2BQ6DHV5 1058 aa15.36■□□□□ 0.05
IGHV3-60-201ENST00000521678 BCORQ6W2J9 1755 aa15.36■□□□□ 0.05
IGHV3-60-201ENST00000521678 ARFGEF2Q9Y6D5 1785 aa15.36■□□□□ 0.05
IGHV3-60-201ENST00000521678 PPP2R1AP30153 589 aa15.35■□□□□ 0.05
IGHV3-60-201ENST00000521678 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
IGHV3-60-201ENST00000521678 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
IGHV3-60-201ENST00000521678 FAM177BA6PVY3 158 aa15.34■□□□□ 0.05
IGHV3-60-201ENST00000521678 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
IGHV3-60-201ENST00000521678 MAP1SQ66K74 1059 aaPredicted RBP15.34■□□□□ 0.05
IGHV3-60-201ENST00000521678 MIS18AQ9NYP9 233 aa15.34■□□□□ 0.05
IGHV3-60-201ENST00000521678 GTF2E1P29083 439 aaPredicted RBP15.33■□□□□ 0.04
IGHV3-60-201ENST00000521678 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.04
IGHV3-60-201ENST00000521678 JDP2Q8WYK2 163 aa15.33■□□□□ 0.04
IGHV3-60-201ENST00000521678 AIDAQ96BJ3 306 aa15.33■□□□□ 0.04
IGHV3-60-201ENST00000521678 NYXQ9GZU5 481 aa15.33■□□□□ 0.04
IGHV3-60-201ENST00000521678 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
IGHV3-60-201ENST00000521678 ADAMTSL1Q8N6G6 1762 aa15.33■□□□□ 0.04
IGHV3-60-201ENST00000521678 LBX1P52954 281 aa15.31■□□□□ 0.04
IGHV3-60-201ENST00000521678 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
IGHV3-60-201ENST00000521678 NUTM1Q86Y26 1132 aa15.31■□□□□ 0.04
IGHV3-60-201ENST00000521678 CRAMP1Q96RY5 1269 aa15.31■□□□□ 0.04
IGHV3-60-201ENST00000521678 DDX21Q9NR30 783 aaKnown RBP eCLIP15.31■□□□□ 0.04
IGHV3-60-201ENST00000521678 MAP3K15Q6ZN16 1313 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms