RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 NBPF26B4DH59 902 aa22.75■■□□□ 1.23
TRAPPC9-210ENST00000521667 NBPF14Q5TI25 921 aa22.75■■□□□ 1.23
TRAPPC9-210ENST00000521667 NBPF10Q6P3W6 841 aaKnown RBP22.75■■□□□ 1.23
TRAPPC9-210ENST00000521667 NBPF15Q8N660 670 aa22.75■■□□□ 1.23
TRAPPC9-210ENST00000521667 C8orf37Q96NL8 207 aa22.75■■□□□ 1.23
TRAPPC9-210ENST00000521667 STAP2Q9UGK3 403 aa22.75■■□□□ 1.23
TRAPPC9-210ENST00000521667 SLIT2O94813 1529 aa22.75■■□□□ 1.23
TRAPPC9-210ENST00000521667 PLBD2Q8NHP8 589 aa22.75■■□□□ 1.23
TRAPPC9-210ENST00000521667 IL1RAPL2Q9NP60 686 aa22.75■■□□□ 1.23
TRAPPC9-210ENST00000521667 CASC1Q6TDU7 716 aa22.74■■□□□ 1.23
TRAPPC9-210ENST00000521667 KAZALD1Q96I82 304 aa22.74■■□□□ 1.23
TRAPPC9-210ENST00000521667 LRP6O75581 1613 aa22.74■■□□□ 1.23
TRAPPC9-210ENST00000521667 NWD2Q9ULI1 1742 aa22.74■■□□□ 1.23
TRAPPC9-210ENST00000521667 WNK3Q9BYP7 1800 aa22.74■■□□□ 1.23
TRAPPC9-210ENST00000521667 AOX1Q06278 1338 aa22.73■■□□□ 1.23
TRAPPC9-210ENST00000521667 SPATA31A1Q5TZJ5 1347 aa22.73■■□□□ 1.23
TRAPPC9-210ENST00000521667 EXOC5O00471 708 aa22.72■■□□□ 1.23
TRAPPC9-210ENST00000521667 TSHZ3Q63HK5 1081 aa22.72■■□□□ 1.23
TRAPPC9-210ENST00000521667 PIGBQ92521 554 aa22.72■■□□□ 1.23
TRAPPC9-210ENST00000521667 TBC1D2Q9BYX2 928 aa22.72■■□□□ 1.23
TRAPPC9-210ENST00000521667 BICC1Q9H694 974 aaKnown RBP22.72■■□□□ 1.23
TRAPPC9-210ENST00000521667 A1BGP04217 495 aa22.71■■□□□ 1.23
TRAPPC9-210ENST00000521667 NGLY1Q96IV0 654 aa22.71■■□□□ 1.23
TRAPPC9-210ENST00000521667 CCDC9Q9Y3X0 531 aaKnown RBP22.71■■□□□ 1.23
TRAPPC9-210ENST00000521667 OS9Q13438 667 aaPredicted RBP22.7■■□□□ 1.23
TRAPPC9-210ENST00000521667 ARFGEF2Q9Y6D5 1785 aa22.7■■□□□ 1.22
TRAPPC9-210ENST00000521667 NUTM1Q86Y26 1132 aa22.69■■□□□ 1.22
TRAPPC9-210ENST00000521667 VSIG10Q8N0Z9 540 aa22.69■■□□□ 1.22
TRAPPC9-210ENST00000521667 CDCA7Q9BWT1 371 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC9-210ENST00000521667 ASAP1Q9ULH1 1129 aa22.69■■□□□ 1.22
TRAPPC9-210ENST00000521667 NBR1Q14596 966 aa22.69■■□□□ 1.22
TRAPPC9-210ENST00000521667 ERC1Q8IUD2 1116 aa22.69■■□□□ 1.22
TRAPPC9-210ENST00000521667 ATG3Q9NT62 314 aa22.69■■□□□ 1.22
TRAPPC9-210ENST00000521667 SPATA31A5Q5VU36 1347 aa22.68■■□□□ 1.22
TRAPPC9-210ENST00000521667 SPATA31A6Q5VVP1 1343 aa22.68■■□□□ 1.22
TRAPPC9-210ENST00000521667 SPATA31A7Q8IWB4 1347 aa22.68■■□□□ 1.22
TRAPPC9-210ENST00000521667 TEX13AQ9BXU3 409 aaPredicted RBP22.68■■□□□ 1.22
TRAPPC9-210ENST00000521667 THRAP3Q9Y2W1 955 aaKnown RBP22.68■■□□□ 1.22
TRAPPC9-210ENST00000521667 BCL9LQ86UU0 1499 aa22.67■■□□□ 1.22
TRAPPC9-210ENST00000521667 TTLL7Q6ZT98 887 aa22.67■■□□□ 1.22
TRAPPC9-210ENST00000521667 UNC5CLQ8IV45 518 aa22.67■■□□□ 1.22
TRAPPC9-210ENST00000521667 PA2G4Q9UQ80 394 aaKnown RBP22.67■■□□□ 1.22
TRAPPC9-210ENST00000521667 ATP5J2-PTCD1G3V325 749 aa22.67■■□□□ 1.22
TRAPPC9-210ENST00000521667 COL15A1P39059 1388 aa22.66■■□□□ 1.22
TRAPPC9-210ENST00000521667 BCL9O00512 1426 aa22.66■■□□□ 1.22
TRAPPC9-210ENST00000521667 KIF2CQ99661 725 aa22.65■■□□□ 1.22
TRAPPC9-210ENST00000521667 A0A087WZG4 1122 aa22.65■■□□□ 1.22
TRAPPC9-210ENST00000521667 TRIM6-TRIM34B2RNG4 842 aa22.65■■□□□ 1.22
TRAPPC9-210ENST00000521667 EPHA10Q5JZY3 1008 aa22.65■■□□□ 1.22
TRAPPC9-210ENST00000521667 CLASRPQ8N2M8 674 aaKnown RBP22.65■■□□□ 1.22
TRAPPC9-210ENST00000521667 TUBGCP6Q96RT7 1819 aa22.64■■□□□ 1.22
TRAPPC9-210ENST00000521667 UBE3BQ7Z3V4 1068 aa22.64■■□□□ 1.22
TRAPPC9-210ENST00000521667 USP26Q9BXU7 913 aa22.64■■□□□ 1.22
TRAPPC9-210ENST00000521667 USP42Q9H9J4 1324 aaKnown RBP22.64■■□□□ 1.21
TRAPPC9-210ENST00000521667 ERC2O15083 957 aa22.64■■□□□ 1.21
TRAPPC9-210ENST00000521667 REC8O95072 547 aa22.64■■□□□ 1.21
TRAPPC9-210ENST00000521667 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.21
TRAPPC9-210ENST00000521667 PI4K2BQ8TCG2 481 aa22.64■■□□□ 1.21
TRAPPC9-210ENST00000521667 RILPL2Q969X0 211 aa22.64■■□□□ 1.21
TRAPPC9-210ENST00000521667 ITGB4P16144 1822 aa22.63■■□□□ 1.21
TRAPPC9-210ENST00000521667 G3BP1Q13283 466 aaKnown RBP eCLIP22.63■■□□□ 1.21
TRAPPC9-210ENST00000521667 HSCBQ8IWL3 235 aa22.63■■□□□ 1.21
TRAPPC9-210ENST00000521667 SNX21Q969T3 373 aa22.63■■□□□ 1.21
TRAPPC9-210ENST00000521667 RBM42Q9BTD8 480 aaKnown RBP22.63■■□□□ 1.21
TRAPPC9-210ENST00000521667 AFDNP55196 1824 aaKnown RBP22.63■■□□□ 1.21
TRAPPC9-210ENST00000521667 NUP188Q5SRE5 1749 aa22.63■■□□□ 1.21
TRAPPC9-210ENST00000521667 STARD3NLO95772 234 aa22.62■■□□□ 1.21
TRAPPC9-210ENST00000521667 CASP7P55210 303 aa22.62■■□□□ 1.21
TRAPPC9-210ENST00000521667 JARID2Q92833 1246 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC9-210ENST00000521667 ZBTB3Q9H5J0 574 aa22.62■■□□□ 1.21
TRAPPC9-210ENST00000521667 TTC41PQ6P2S7 1318 aa22.62■■□□□ 1.21
TRAPPC9-210ENST00000521667 RABL6Q3YEC7 729 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC9-210ENST00000521667 FNBP4Q8N3X1 1017 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC9-210ENST00000521667 DDB1Q16531 1140 aa22.61■■□□□ 1.21
TRAPPC9-210ENST00000521667 MEX3CQ5U5Q3 659 aaKnown RBP22.61■■□□□ 1.21
TRAPPC9-210ENST00000521667 CWC25Q9NXE8 425 aaPredicted RBP22.61■■□□□ 1.21
TRAPPC9-210ENST00000521667 H7C1W4 665 aa22.6■■□□□ 1.21
TRAPPC9-210ENST00000521667 SYTL4Q96C24 671 aaPredicted RBP22.6■■□□□ 1.21
TRAPPC9-210ENST00000521667 USP21Q9UK80 565 aa22.6■■□□□ 1.21
TRAPPC9-210ENST00000521667 SASH1O94885 1247 aa22.6■■□□□ 1.21
TRAPPC9-210ENST00000521667 CHMLP26374 656 aa22.6■■□□□ 1.21
TRAPPC9-210ENST00000521667 FAM98CQ17RN3 349 aaKnown RBP22.6■■□□□ 1.21
TRAPPC9-210ENST00000521667 VPS72Q15906 364 aa22.59■■□□□ 1.21
TRAPPC9-210ENST00000521667 CCDC191Q8NCU4 936 aa22.59■■□□□ 1.21
TRAPPC9-210ENST00000521667 ESYT1Q9BSJ8 1104 aa22.59■■□□□ 1.21
TRAPPC9-210ENST00000521667 IFIT2P09913 472 aaKnown RBP22.58■■□□□ 1.21
TRAPPC9-210ENST00000521667 BARGINQ6ZT62 677 aa22.58■■□□□ 1.21
TRAPPC9-210ENST00000521667 COPRSQ9NQ92 184 aa22.58■■□□□ 1.21
TRAPPC9-210ENST00000521667 GLRX3O76003 335 aaKnown RBP22.58■■□□□ 1.2
TRAPPC9-210ENST00000521667 PRIM1P49642 420 aaKnown RBP22.58■■□□□ 1.2
TRAPPC9-210ENST00000521667 GPATCH3Q96I76 525 aa22.58■■□□□ 1.2
TRAPPC9-210ENST00000521667 SIL1Q9H173 461 aa22.58■■□□□ 1.2
TRAPPC9-210ENST00000521667 SLKQ9H2G2 1235 aaPredicted RBP22.58■■□□□ 1.2
TRAPPC9-210ENST00000521667 RFX5P48382 616 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC9-210ENST00000521667 AACSQ86V21 672 aa22.57■■□□□ 1.2
TRAPPC9-210ENST00000521667 KLHDC4Q8TBB5 520 aa22.57■■□□□ 1.2
TRAPPC9-210ENST00000521667 ECHDC1Q9NTX5 307 aa22.57■■□□□ 1.2
TRAPPC9-210ENST00000521667 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC9-210ENST00000521667 SLC4A9Q96Q91 983 aa22.57■■□□□ 1.2
TRAPPC9-210ENST00000521667 ANTXR1Q9H6X2 564 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms