RNA–Protein interactions for RNA: ENST00000521175.1

MCPH1-205, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-205ENST00000521175 RASSF7Q02833 373 aa16.65■□□□□ 0.26
MCPH1-205ENST00000521175 DCTN1Q14203 1278 aa16.65■□□□□ 0.26
MCPH1-205ENST00000521175 CCDC24Q8N4L8 307 aa16.65■□□□□ 0.26
MCPH1-205ENST00000521175 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
MCPH1-205ENST00000521175 C16orf71Q8IYS4 520 aaPredicted RBP16.64■□□□□ 0.25
MCPH1-205ENST00000521175 SBF1O95248 1867 aa16.64■□□□□ 0.25
MCPH1-205ENST00000521175 H0YIN7 160 aa16.63■□□□□ 0.25
MCPH1-205ENST00000521175 TTLL6Q8N841 843 aa16.63■□□□□ 0.25
MCPH1-205ENST00000521175 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
MCPH1-205ENST00000521175 BCORQ6W2J9 1755 aa16.62■□□□□ 0.25
MCPH1-205ENST00000521175 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
MCPH1-205ENST00000521175 TOMM70O94826 608 aa16.62■□□□□ 0.25
MCPH1-205ENST00000521175 NEFMP07197 916 aa16.62■□□□□ 0.25
MCPH1-205ENST00000521175 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
MCPH1-205ENST00000521175 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.25
MCPH1-205ENST00000521175 USP16Q9Y5T5 823 aa16.62■□□□□ 0.25
MCPH1-205ENST00000521175 KDM2BQ8NHM5 1336 aa16.62■□□□□ 0.25
MCPH1-205ENST00000521175 CACNA1SQ13698 1873 aa16.61■□□□□ 0.25
MCPH1-205ENST00000521175 SETDB2Q96T68 719 aa16.61■□□□□ 0.25
MCPH1-205ENST00000521175 CCDC88AQ3V6T2 1871 aa16.61■□□□□ 0.25
MCPH1-205ENST00000521175 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
MCPH1-205ENST00000521175 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
MCPH1-205ENST00000521175 PRR5LQ6MZQ0 368 aa16.6■□□□□ 0.25
MCPH1-205ENST00000521175 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
MCPH1-205ENST00000521175 TIAM2Q8IVF5 1701 aa16.59■□□□□ 0.25
MCPH1-205ENST00000521175 DLG5Q8TDM6 1919 aa16.59■□□□□ 0.25
MCPH1-205ENST00000521175 SNRPA1P09661 255 aaKnown RBP16.59■□□□□ 0.25
MCPH1-205ENST00000521175 CNBD1Q8NA66 436 aa16.59■□□□□ 0.25
MCPH1-205ENST00000521175 RRAGCQ9HB90 399 aa16.59■□□□□ 0.25
MCPH1-205ENST00000521175 CREBZFQ9NS37 354 aa16.59■□□□□ 0.25
MCPH1-205ENST00000521175 PDE6BP35913 854 aa16.58■□□□□ 0.24
MCPH1-205ENST00000521175 ST5P78524 1137 aa16.58■□□□□ 0.24
MCPH1-205ENST00000521175 MIS18AQ9NYP9 233 aa16.58■□□□□ 0.24
MCPH1-205ENST00000521175 CEP350Q5VT06 3117 aa16.58■□□□□ 0.24
MCPH1-205ENST00000521175 LMNB1P20700 586 aa16.57■□□□□ 0.24
MCPH1-205ENST00000521175 APLP1P51693 650 aa16.57■□□□□ 0.24
MCPH1-205ENST00000521175 BRIP1Q9BX63 1249 aa16.57■□□□□ 0.24
MCPH1-205ENST00000521175 HTATSF1O43719 755 aaKnown RBP16.56■□□□□ 0.24
MCPH1-205ENST00000521175 C21orf2O43822 256 aa16.56■□□□□ 0.24
MCPH1-205ENST00000521175 TAF7Q15545 349 aaPredicted RBP16.56■□□□□ 0.24
MCPH1-205ENST00000521175 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
MCPH1-205ENST00000521175 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
MCPH1-205ENST00000521175 FAM177BA6PVY3 158 aa16.55■□□□□ 0.24
MCPH1-205ENST00000521175 PRELPP51888 382 aa16.55■□□□□ 0.24
MCPH1-205ENST00000521175 NBPF5PQ86XG9 351 aaPredicted RBP16.55■□□□□ 0.24
MCPH1-205ENST00000521175 RBM46Q8TBY0 533 aaKnown RBP16.55■□□□□ 0.24
MCPH1-205ENST00000521175 PDZRN3Q9UPQ7 1066 aa16.55■□□□□ 0.24
MCPH1-205ENST00000521175 WDR90Q96KV7 1748 aa16.54■□□□□ 0.24
MCPH1-205ENST00000521175 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
MCPH1-205ENST00000521175 NFKBIEO00221 500 aa16.54■□□□□ 0.24
MCPH1-205ENST00000521175 NGEFQ8N5V2 710 aa16.54■□□□□ 0.24
MCPH1-205ENST00000521175 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
MCPH1-205ENST00000521175 NIP7Q9Y221 180 aaKnown RBP eCLIP16.53■□□□□ 0.24
MCPH1-205ENST00000521175 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
MCPH1-205ENST00000521175 ZC3H4Q9UPT8 1303 aaKnown RBP16.52■□□□□ 0.24
MCPH1-205ENST00000521175 NBPF26B4DH59 902 aa16.52■□□□□ 0.24
MCPH1-205ENST00000521175 NBPF10Q6P3W6 841 aaKnown RBP16.52■□□□□ 0.24
MCPH1-205ENST00000521175 NBPF15Q8N660 670 aa16.52■□□□□ 0.24
MCPH1-205ENST00000521175 CNKSR1Q969H4 720 aa16.52■□□□□ 0.24
MCPH1-205ENST00000521175 FER1L6Q2WGJ9 1857 aa16.52■□□□□ 0.23
MCPH1-205ENST00000521175 SLX4Q8IY92 1834 aa16.52■□□□□ 0.23
MCPH1-205ENST00000521175 GLTPD2A6NH11 291 aa16.51■□□□□ 0.23
MCPH1-205ENST00000521175 HTRA3P83110 453 aa16.51■□□□□ 0.23
MCPH1-205ENST00000521175 NFE2L2Q16236 605 aa16.51■□□□□ 0.23
MCPH1-205ENST00000521175 ERFEQ4G0M1 354 aa16.51■□□□□ 0.23
MCPH1-205ENST00000521175 PRPF40BQ6NWY9 871 aaKnown RBP16.51■□□□□ 0.23
MCPH1-205ENST00000521175 CLEC4GQ6UXB4 293 aa16.51■□□□□ 0.23
MCPH1-205ENST00000521175 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
MCPH1-205ENST00000521175 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
MCPH1-205ENST00000521175 SRGNP10124 158 aa16.5■□□□□ 0.23
MCPH1-205ENST00000521175 FSTL1Q12841 308 aa16.5■□□□□ 0.23
MCPH1-205ENST00000521175 STYK1Q6J9G0 422 aa16.5■□□□□ 0.23
MCPH1-205ENST00000521175 PNISRQ8TF01 805 aaKnown RBP16.5■□□□□ 0.23
MCPH1-205ENST00000521175 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
MCPH1-205ENST00000521175 TAOK3Q9H2K8 898 aa16.5■□□□□ 0.23
MCPH1-205ENST00000521175 DICER1Q9UPY3 1922 aaKnown RBP16.49■□□□□ 0.23
MCPH1-205ENST00000521175 GTF2E1P29083 439 aaPredicted RBP16.49■□□□□ 0.23
MCPH1-205ENST00000521175 HLFQ16534 295 aa16.49■□□□□ 0.23
MCPH1-205ENST00000521175 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
MCPH1-205ENST00000521175 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
MCPH1-205ENST00000521175 MYL6BP14649 208 aa16.48■□□□□ 0.23
MCPH1-205ENST00000521175 VEGFAP15692 232 aaPredicted RBP16.48■□□□□ 0.23
MCPH1-205ENST00000521175 MNX1P50219 401 aaPredicted RBP16.48■□□□□ 0.23
MCPH1-205ENST00000521175 DPY19L2Q6NUT2 758 aa16.48■□□□□ 0.23
MCPH1-205ENST00000521175 TPTE2Q6XPS3 522 aa16.48■□□□□ 0.23
MCPH1-205ENST00000521175 SMC1BQ8NDV3 1235 aa16.48■□□□□ 0.23
MCPH1-205ENST00000521175 EIF4A1P60842 406 aaKnown RBP16.47■□□□□ 0.23
MCPH1-205ENST00000521175 KIF6Q6ZMV9 814 aa16.47■□□□□ 0.23
MCPH1-205ENST00000521175 NPR1P16066 1061 aa16.46■□□□□ 0.23
MCPH1-205ENST00000521175 SOGA3Q5TF21 947 aa16.46■□□□□ 0.23
MCPH1-205ENST00000521175 NUP98P52948 1817 aa16.45■□□□□ 0.22
MCPH1-205ENST00000521175 CCDC93Q567U6 631 aa16.45■□□□□ 0.22
MCPH1-205ENST00000521175 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
MCPH1-205ENST00000521175 LTBP3Q9NS15 1303 aa16.45■□□□□ 0.22
MCPH1-205ENST00000521175 GPTP24298 496 aa16.44■□□□□ 0.22
MCPH1-205ENST00000521175 RIPK4P57078 832 aa16.44■□□□□ 0.22
MCPH1-205ENST00000521175 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
MCPH1-205ENST00000521175 RALBP1Q15311 655 aa16.44■□□□□ 0.22
MCPH1-205ENST00000521175 TTLL7Q6ZT98 887 aa16.44■□□□□ 0.22
MCPH1-205ENST00000521175 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms