RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 POTECB2RU33 542 aa26.96■■□□□ 1.91
PABPC1-217ENST00000521067 ST5P78524 1137 aa26.96■■□□□ 1.91
PABPC1-217ENST00000521067 COL11A2P13942 1736 aaPredicted RBP26.96■■□□□ 1.91
PABPC1-217ENST00000521067 NPHP1O15259 732 aa26.95■■□□□ 1.9
PABPC1-217ENST00000521067 STYK1Q6J9G0 422 aa26.95■■□□□ 1.9
PABPC1-217ENST00000521067 NBPF5PQ86XG9 351 aaPredicted RBP26.95■■□□□ 1.9
PABPC1-217ENST00000521067 PCNTO95613 3336 aa26.95■■□□□ 1.9
PABPC1-217ENST00000521067 VEGFAP15692 232 aaPredicted RBP26.94■■□□□ 1.9
PABPC1-217ENST00000521067 HLFQ16534 295 aa26.94■■□□□ 1.9
PABPC1-217ENST00000521067 PRPF40BQ6NWY9 871 aaKnown RBP26.94■■□□□ 1.9
PABPC1-217ENST00000521067 CNKSR1Q969H4 720 aa26.94■■□□□ 1.9
PABPC1-217ENST00000521067 MASTLQ96GX5 879 aa26.94■■□□□ 1.9
PABPC1-217ENST00000521067 THUMPD2Q9BTF0 503 aaKnown RBP26.93■■□□□ 1.9
PABPC1-217ENST00000521067 BCORQ6W2J9 1755 aa26.93■■□□□ 1.9
PABPC1-217ENST00000521067 SMC1BQ8NDV3 1235 aa26.92■■□□□ 1.9
PABPC1-217ENST00000521067 C7orf43Q8WVR3 580 aa26.92■■□□□ 1.9
PABPC1-217ENST00000521067 NIP7Q9Y221 180 aaKnown RBP eCLIP26.92■■□□□ 1.9
PABPC1-217ENST00000521067 ZNF652Q9Y2D9 606 aa26.92■■□□□ 1.9
PABPC1-217ENST00000521067 SLX4Q8IY92 1834 aa26.91■■□□□ 1.9
PABPC1-217ENST00000521067 KLRG2A4D1S0 409 aaPredicted RBP26.91■■□□□ 1.9
PABPC1-217ENST00000521067 ERFEQ4G0M1 354 aa26.91■■□□□ 1.9
PABPC1-217ENST00000521067 TNRC6CQ9HCJ0 1690 aaKnown RBP26.91■■□□□ 1.9
PABPC1-217ENST00000521067 LTBP3Q9NS15 1303 aa26.9■■□□□ 1.9
PABPC1-217ENST00000521067 CCDC88AQ3V6T2 1871 aa26.9■■□□□ 1.9
PABPC1-217ENST00000521067 NFE2L2Q16236 605 aa26.9■■□□□ 1.9
PABPC1-217ENST00000521067 TAOK3Q9H2K8 898 aa26.9■■□□□ 1.9
PABPC1-217ENST00000521067 FAM177BA6PVY3 158 aa26.89■■□□□ 1.9
PABPC1-217ENST00000521067 RGL2O15211 777 aa26.89■■□□□ 1.9
PABPC1-217ENST00000521067 EIF4A1P60842 406 aaKnown RBP26.89■■□□□ 1.9
PABPC1-217ENST00000521067 TPTE2Q6XPS3 522 aa26.89■■□□□ 1.9
PABPC1-217ENST00000521067 NGEFQ8N5V2 710 aa26.88■■□□□ 1.89
PABPC1-217ENST00000521067 KLRG1Q96E93 195 aa26.88■■□□□ 1.89
PABPC1-217ENST00000521067 FER1L6Q2WGJ9 1857 aa26.87■■□□□ 1.89
PABPC1-217ENST00000521067 NEFMP07197 916 aa26.87■■□□□ 1.89
PABPC1-217ENST00000521067 DPY19L2Q6NUT2 758 aa26.87■■□□□ 1.89
PABPC1-217ENST00000521067 PNISRQ8TF01 805 aaKnown RBP26.87■■□□□ 1.89
PABPC1-217ENST00000521067 WDR90Q96KV7 1748 aa26.87■■□□□ 1.89
PABPC1-217ENST00000521067 NPR1P16066 1061 aa26.86■■□□□ 1.89
PABPC1-217ENST00000521067 OLFM4Q6UX06 510 aa26.86■■□□□ 1.89
PABPC1-217ENST00000521067 TTLL7Q6ZT98 887 aa26.85■■□□□ 1.89
PABPC1-217ENST00000521067 RRP7AQ9Y3A4 280 aaKnown RBP26.85■■□□□ 1.89
PABPC1-217ENST00000521067 TIAM2Q8IVF5 1701 aa26.85■■□□□ 1.89
PABPC1-217ENST00000521067 DDNO94850 711 aaPredicted RBP26.83■■□□□ 1.89
PABPC1-217ENST00000521067 SOGA3Q5TF21 947 aa26.83■■□□□ 1.89
PABPC1-217ENST00000521067 JMYQ8N9B5 988 aa26.82■■□□□ 1.88
PABPC1-217ENST00000521067 DLG5Q8TDM6 1919 aa26.82■■□□□ 1.88
PABPC1-217ENST00000521067 ERVV-1B6SEH8 477 aa26.81■■□□□ 1.88
PABPC1-217ENST00000521067 MYL6BP14649 208 aa26.81■■□□□ 1.88
PABPC1-217ENST00000521067 CCDC93Q567U6 631 aa26.8■■□□□ 1.88
PABPC1-217ENST00000521067 NUTM1Q86Y26 1132 aa26.8■■□□□ 1.88
PABPC1-217ENST00000521067 MAP3K15Q6ZN16 1313 aa26.8■■□□□ 1.88
PABPC1-217ENST00000521067 KDM3BQ7LBC6 1761 aa26.79■■□□□ 1.88
PABPC1-217ENST00000521067 POTEIP0CG38 1075 aa26.79■■□□□ 1.88
PABPC1-217ENST00000521067 POTEJP0CG39 1038 aa26.79■■□□□ 1.88
PABPC1-217ENST00000521067 DICER1Q9UPY3 1922 aaKnown RBP26.78■■□□□ 1.88
PABPC1-217ENST00000521067 GTF2E1P29083 439 aaPredicted RBP26.78■■□□□ 1.88
PABPC1-217ENST00000521067 PNNQ9H307 717 aaKnown RBP26.78■■□□□ 1.88
PABPC1-217ENST00000521067 ZNF277Q9NRM2 450 aaPredicted RBP26.78■■□□□ 1.88
PABPC1-217ENST00000521067 MAPK8IP3Q9UPT6 1336 aa26.78■■□□□ 1.88
PABPC1-217ENST00000521067 ABCC12Q96J65 1359 aa26.78■■□□□ 1.88
PABPC1-217ENST00000521067 CACNA1SQ13698 1873 aa26.77■■□□□ 1.88
PABPC1-217ENST00000521067 UBN2Q6ZU65 1347 aa26.77■■□□□ 1.88
PABPC1-217ENST00000521067 FKBP4Q02790 459 aaKnown RBP eCLIP26.77■■□□□ 1.88
PABPC1-217ENST00000521067 ZBTB3Q9H5J0 574 aa26.77■■□□□ 1.88
PABPC1-217ENST00000521067 GPTP24298 496 aa26.76■■□□□ 1.87
PABPC1-217ENST00000521067 RIPK4P57078 832 aa26.76■■□□□ 1.87
PABPC1-217ENST00000521067 CRY2Q49AN0 593 aa26.76■■□□□ 1.87
PABPC1-217ENST00000521067 LRP10Q7Z4F1 713 aa26.76■■□□□ 1.87
PABPC1-217ENST00000521067 ARFGEF2Q9Y6D5 1785 aa26.76■■□□□ 1.87
PABPC1-217ENST00000521067 PDIA6Q15084 440 aa26.75■■□□□ 1.87
PABPC1-217ENST00000521067 SUSD4Q5VX71 490 aa26.75■■□□□ 1.87
PABPC1-217ENST00000521067 TSPYL4Q9UJ04 414 aa26.75■■□□□ 1.87
PABPC1-217ENST00000521067 LAMB4A4D0S4 1761 aa26.75■■□□□ 1.87
PABPC1-217ENST00000521067 ALDH1B1P30837 517 aa26.74■■□□□ 1.87
PABPC1-217ENST00000521067 RALBP1Q15311 655 aa26.74■■□□□ 1.87
PABPC1-217ENST00000521067 KIF6Q6ZMV9 814 aa26.74■■□□□ 1.87
PABPC1-217ENST00000521067 NYXQ9GZU5 481 aa26.74■■□□□ 1.87
PABPC1-217ENST00000521067 ZNF34Q8IZ26 560 aa26.73■■□□□ 1.87
PABPC1-217ENST00000521067 RTKN2Q8IZC4 609 aa26.73■■□□□ 1.87
PABPC1-217ENST00000521067 ZNF541Q9H0D2 1346 aa26.72■■□□□ 1.87
PABPC1-217ENST00000521067 TMPOP42166 694 aaKnown RBP26.72■■□□□ 1.87
PABPC1-217ENST00000521067 CHADLQ6NUI6 762 aa26.72■■□□□ 1.87
PABPC1-217ENST00000521067 SLC51AQ86UW1 340 aa26.72■■□□□ 1.87
PABPC1-217ENST00000521067 SYNE4Q8N205 404 aa26.72■■□□□ 1.87
PABPC1-217ENST00000521067 L3MBTL3Q96JM7 780 aaPredicted RBP26.72■■□□□ 1.87
PABPC1-217ENST00000521067 EIF2S2P20042 333 aaKnown RBP26.71■■□□□ 1.87
PABPC1-217ENST00000521067 PROSER3Q2NL68 480 aa26.71■■□□□ 1.87
PABPC1-217ENST00000521067 GIGYF2Q6Y7W6 1299 aaKnown RBP26.71■■□□□ 1.87
PABPC1-217ENST00000521067 SNED1Q8TER0 1413 aa26.71■■□□□ 1.87
PABPC1-217ENST00000521067 ANXA1P04083 346 aa26.7■■□□□ 1.86
PABPC1-217ENST00000521067 HOXA10P31260 410 aaPredicted RBP26.7■■□□□ 1.86
PABPC1-217ENST00000521067 DDX10Q13206 875 aaKnown RBP26.7■■□□□ 1.86
PABPC1-217ENST00000521067 C3orf67Q6ZVT6 689 aa26.7■■□□□ 1.86
PABPC1-217ENST00000521067 NUP98P52948 1817 aa26.69■■□□□ 1.86
PABPC1-217ENST00000521067 ERBB4Q15303 1308 aa26.69■■□□□ 1.86
PABPC1-217ENST00000521067 NTSR2O95665 410 aa26.69■■□□□ 1.86
PABPC1-217ENST00000521067 TAF1DQ9H5J8 278 aaPredicted RBP26.69■■□□□ 1.86
PABPC1-217ENST00000521067 IARSP41252 1262 aaKnown RBP26.68■■□□□ 1.86
PABPC1-217ENST00000521067 COL13A1Q5TAT6 717 aaPredicted RBP26.68■■□□□ 1.86
PABPC1-217ENST00000521067 FZD9O00144 591 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms