RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
SPARC-202ENST00000520687 APLP1P51693 650 aa12.26□□□□□ -0.45
SPARC-202ENST00000520687 NECTIN2Q92692 538 aa12.26□□□□□ -0.45
SPARC-202ENST00000520687 GPBP1L1Q9HC44 474 aaPredicted RBP12.26□□□□□ -0.45
SPARC-202ENST00000520687 STAP2Q9UGK3 403 aa12.26□□□□□ -0.45
SPARC-202ENST00000520687 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
SPARC-202ENST00000520687 EPB41L2O43491 1005 aaKnown RBP12.25□□□□□ -0.45
SPARC-202ENST00000520687 REC8O95072 547 aa12.25□□□□□ -0.45
SPARC-202ENST00000520687 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
SPARC-202ENST00000520687 MTX1Q13505 466 aa12.25□□□□□ -0.45
SPARC-202ENST00000520687 POLA2Q14181 598 aa12.25□□□□□ -0.45
SPARC-202ENST00000520687 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
SPARC-202ENST00000520687 ARXQ96QS3 562 aa12.25□□□□□ -0.45
SPARC-202ENST00000520687 PHAXQ9H814 394 aaKnown RBP12.25□□□□□ -0.45
SPARC-202ENST00000520687 ANO8Q9HCE9 1232 aaPredicted RBP12.25□□□□□ -0.45
SPARC-202ENST00000520687 PARP4Q9UKK3 1724 aaKnown RBP12.25□□□□□ -0.45
SPARC-202ENST00000520687 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
SPARC-202ENST00000520687 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
SPARC-202ENST00000520687 PI4KAP2A4QPH2 592 aa12.24□□□□□ -0.45
SPARC-202ENST00000520687 PLSCR1O15162 318 aa12.24□□□□□ -0.45
SPARC-202ENST00000520687 GSPT1P15170 499 aaKnown RBP12.24□□□□□ -0.45
SPARC-202ENST00000520687 PDE1AP54750 535 aa12.24□□□□□ -0.45
SPARC-202ENST00000520687 PIAS4Q8N2W9 510 aaPredicted RBP12.24□□□□□ -0.45
SPARC-202ENST00000520687 PI4KAP1Q8N8J0 262 aa12.24□□□□□ -0.45
SPARC-202ENST00000520687 PDGFDQ9GZP0 370 aaPredicted RBP12.24□□□□□ -0.45
SPARC-202ENST00000520687 MRC1P22897 1456 aa12.24□□□□□ -0.45
SPARC-202ENST00000520687 SPATA31A1Q5TZJ5 1347 aa12.24□□□□□ -0.45
SPARC-202ENST00000520687 KCNQ3O43525 872 aa12.23□□□□□ -0.45
SPARC-202ENST00000520687 NFKBIBQ15653 356 aa12.23□□□□□ -0.45
SPARC-202ENST00000520687 LINS1Q8NG48 757 aa12.23□□□□□ -0.45
SPARC-202ENST00000520687 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
SPARC-202ENST00000520687 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
SPARC-202ENST00000520687 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
SPARC-202ENST00000520687 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
SPARC-202ENST00000520687 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
SPARC-202ENST00000520687 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
SPARC-202ENST00000520687 SDSP20132 328 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 LARP1Q6PKG0 1096 aaKnown RBP12.22□□□□□ -0.45
SPARC-202ENST00000520687 ERC1Q8IUD2 1116 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 TTC5Q8N0Z6 440 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 ANTXR1Q9H6X2 564 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
SPARC-202ENST00000520687 UTYO14607 1347 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 SALL3Q9BXA9 1300 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 ADCY9O60503 1353 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 ERVV-2B6SEH9 535 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 RABEP1Q15276 862 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
SPARC-202ENST00000520687 KIF1BPQ96EK5 621 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 FMNL2Q96PY5 1086 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 PRDM11Q9NQV5 511 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 CHMP5Q9NZZ3 219 aa12.22□□□□□ -0.45
SPARC-202ENST00000520687 KDM6AO15550 1401 aaPredicted RBP12.21□□□□□ -0.45
SPARC-202ENST00000520687 PNMA6EA0A0J9YXQ4 647 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 ERC2O15083 957 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 MX1P20591 662 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 NEXNQ0ZGT2 675 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 PPP1R42Q7Z4L9 355 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 CARD10Q9BWT7 1032 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 STK32BQ9NY57 414 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 MAP3K2Q9Y2U5 619 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.46
SPARC-202ENST00000520687 MEGF6O75095 1541 aa12.2□□□□□ -0.46
SPARC-202ENST00000520687 SMARCA5O60264 1052 aaPredicted RBP12.2□□□□□ -0.46
SPARC-202ENST00000520687 GRIN3BO60391 1043 aa12.2□□□□□ -0.46
SPARC-202ENST00000520687 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
SPARC-202ENST00000520687 USP26Q9BXU7 913 aa12.2□□□□□ -0.46
SPARC-202ENST00000520687 C9orf78Q9NZ63 289 aaPredicted RBP12.2□□□□□ -0.46
SPARC-202ENST00000520687 EXOC6BQ9Y2D4 811 aa12.2□□□□□ -0.46
SPARC-202ENST00000520687 SRGAP3O43295 1099 aa12.19□□□□□ -0.46
SPARC-202ENST00000520687 CABP4P57796 275 aa12.19□□□□□ -0.46
SPARC-202ENST00000520687 CHRNA2Q15822 529 aa12.19□□□□□ -0.46
SPARC-202ENST00000520687 BARGINQ6ZT62 677 aa12.19□□□□□ -0.46
SPARC-202ENST00000520687 DNAJC5GQ8N7S2 189 aa12.19□□□□□ -0.46
SPARC-202ENST00000520687 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
SPARC-202ENST00000520687 ZCRB1Q8TBF4 217 aaKnown RBP12.19□□□□□ -0.46
SPARC-202ENST00000520687 CYP27B1O15528 508 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 SURF6O75683 361 aaKnown RBP12.18□□□□□ -0.46
SPARC-202ENST00000520687 USP42Q9H9J4 1324 aaKnown RBP12.18□□□□□ -0.46
SPARC-202ENST00000520687 COL5A2P05997 1499 aaPredicted RBP12.18□□□□□ -0.46
SPARC-202ENST00000520687 COL15A1P39059 1388 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 TTC41PQ6P2S7 1318 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 APBB1O00213 710 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 GRM8O00222 908 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
SPARC-202ENST00000520687 MCCP23508 829 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 PDIA6Q15084 440 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 TOM1L2Q6ZVM7 507 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 RHPN1Q8TCX5 695 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
SPARC-202ENST00000520687 KIF2CQ99661 725 aa12.18□□□□□ -0.46
SPARC-202ENST00000520687 IL2RBP14784 551 aa12.17□□□□□ -0.46
SPARC-202ENST00000520687 SLC15A2Q16348 729 aa12.17□□□□□ -0.46
SPARC-202ENST00000520687 RIC3Q7Z5B4 369 aa12.17□□□□□ -0.46
SPARC-202ENST00000520687 GPATCH3Q96I76 525 aa12.17□□□□□ -0.46
SPARC-202ENST00000520687 PTMSP20962 102 aa12.16□□□□□ -0.46
SPARC-202ENST00000520687 ANAPC15P60006 121 aa12.16□□□□□ -0.46
SPARC-202ENST00000520687 ZNF496Q96IT1 587 aaPredicted RBP12.16□□□□□ -0.46
SPARC-202ENST00000520687 METTL22Q9BUU2 404 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms