RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 MAP3K2Q9Y2U5 619 aa11.32□□□□□ -0.6
CSMD1-208ENST00000520561 COL15A1P39059 1388 aa11.31□□□□□ -0.6
CSMD1-208ENST00000520561 PLSCR1O15162 318 aa11.31□□□□□ -0.6
CSMD1-208ENST00000520561 RC3H1Q5TC82 1133 aaKnown RBP11.31□□□□□ -0.6
CSMD1-208ENST00000520561 INTS5Q6P9B9 1019 aaKnown RBP11.31□□□□□ -0.6
CSMD1-208ENST00000520561 ANKRD13DQ6ZTN6 518 aa11.31□□□□□ -0.6
CSMD1-208ENST00000520561 AK7Q96M32 723 aa11.31□□□□□ -0.6
CSMD1-208ENST00000520561 SRCIN1Q9C0H9 1055 aa11.31□□□□□ -0.6
CSMD1-208ENST00000520561 A0A087WZG4 1122 aa11.3□□□□□ -0.6
CSMD1-208ENST00000520561 KCNQ4P56696 695 aa11.3□□□□□ -0.6
CSMD1-208ENST00000520561 TXNRD1Q16881 649 aa11.3□□□□□ -0.6
CSMD1-208ENST00000520561 DZIP3Q86Y13 1208 aaKnown RBP11.3□□□□□ -0.6
CSMD1-208ENST00000520561 ARXQ96QS3 562 aa11.3□□□□□ -0.6
CSMD1-208ENST00000520561 PPP4R2Q9NY27 417 aa11.3□□□□□ -0.6
CSMD1-208ENST00000520561 MAP3K15Q6ZN16 1313 aa11.3□□□□□ -0.6
CSMD1-208ENST00000520561 SCN7AQ01118 1682 aa11.3□□□□□ -0.6
CSMD1-208ENST00000520561 BCORQ6W2J9 1755 aa11.29□□□□□ -0.6
CSMD1-208ENST00000520561 GNPATO15228 680 aa11.29□□□□□ -0.6
CSMD1-208ENST00000520561 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
CSMD1-208ENST00000520561 TTLL7Q6ZT98 887 aa11.29□□□□□ -0.6
CSMD1-208ENST00000520561 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
CSMD1-208ENST00000520561 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
CSMD1-208ENST00000520561 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
CSMD1-208ENST00000520561 MYH14Q7Z406 1995 aaKnown RBP11.28□□□□□ -0.6
CSMD1-208ENST00000520561 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
CSMD1-208ENST00000520561 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
CSMD1-208ENST00000520561 BAG6P46379 1132 aa11.28□□□□□ -0.6
CSMD1-208ENST00000520561 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
CSMD1-208ENST00000520561 BEND3Q5T5X7 828 aa11.28□□□□□ -0.6
CSMD1-208ENST00000520561 MYD88Q99836 296 aa11.28□□□□□ -0.6
CSMD1-208ENST00000520561 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
CSMD1-208ENST00000520561 RTCBQ9Y3I0 505 aaKnown RBP11.28□□□□□ -0.6
CSMD1-208ENST00000520561 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
CSMD1-208ENST00000520561 AFDNP55196 1824 aaKnown RBP11.28□□□□□ -0.6
CSMD1-208ENST00000520561 GNAI3P08754 354 aa11.27□□□□□ -0.61
CSMD1-208ENST00000520561 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
CSMD1-208ENST00000520561 IBTKQ9P2D0 1353 aaPredicted RBP11.27□□□□□ -0.61
CSMD1-208ENST00000520561 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
CSMD1-208ENST00000520561 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
CSMD1-208ENST00000520561 ZBTB7BO15156 539 aaPredicted RBP11.26□□□□□ -0.61
CSMD1-208ENST00000520561 UBTFL1P0CB47 393 aaPredicted RBP11.26□□□□□ -0.61
CSMD1-208ENST00000520561 ADRA2BP18089 450 aa11.26□□□□□ -0.61
CSMD1-208ENST00000520561 GIGYF2Q6Y7W6 1299 aaKnown RBP11.26□□□□□ -0.61
CSMD1-208ENST00000520561 CCDC136Q96JN2 1154 aa11.26□□□□□ -0.61
CSMD1-208ENST00000520561 MEIS3Q99687 375 aa11.26□□□□□ -0.61
CSMD1-208ENST00000520561 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
CSMD1-208ENST00000520561 UBR3Q6ZT12 1888 aa11.25□□□□□ -0.61
CSMD1-208ENST00000520561 NEURL1BA8MQ27 555 aa11.25□□□□□ -0.61
CSMD1-208ENST00000520561 PHF14O94880 888 aa11.25□□□□□ -0.61
CSMD1-208ENST00000520561 CWF19L2Q2TBE0 894 aaKnown RBP11.25□□□□□ -0.61
CSMD1-208ENST00000520561 CCDC125Q86Z20 511 aa11.25□□□□□ -0.61
CSMD1-208ENST00000520561 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
CSMD1-208ENST00000520561 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
CSMD1-208ENST00000520561 ATP5J2-PTCD1G3V325 749 aa11.24□□□□□ -0.61
CSMD1-208ENST00000520561 RGL2O15211 777 aa11.24□□□□□ -0.61
CSMD1-208ENST00000520561 CAMTA2O94983 1202 aa11.24□□□□□ -0.61
CSMD1-208ENST00000520561 GNAI2P04899 355 aa11.24□□□□□ -0.61
CSMD1-208ENST00000520561 IGKV5-2P06315 115 aa11.24□□□□□ -0.61
CSMD1-208ENST00000520561 SSFA2P28290 1259 aa11.24□□□□□ -0.61
CSMD1-208ENST00000520561 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
CSMD1-208ENST00000520561 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
CSMD1-208ENST00000520561 PROM2Q8N271 834 aa11.24□□□□□ -0.61
CSMD1-208ENST00000520561 C1orf115Q9H7X2 142 aa11.24□□□□□ -0.61
CSMD1-208ENST00000520561 CWC25Q9NXE8 425 aaPredicted RBP11.24□□□□□ -0.61
CSMD1-208ENST00000520561 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
CSMD1-208ENST00000520561 GRM8O00222 908 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 ZPR1O75312 459 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 RFC4P35249 363 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 GCKRQ14397 625 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 EZH2Q15910 746 aaKnown RBP11.23□□□□□ -0.61
CSMD1-208ENST00000520561 TRAPPC3LQ5T215 181 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 B4GALNT3Q6L9W6 998 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 CCDC191Q8NCU4 936 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 CAMKK2Q96RR4 588 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 NARFQ9UHQ1 456 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 NUP98P52948 1817 aa11.23□□□□□ -0.61
CSMD1-208ENST00000520561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.22□□□□□ -0.61
CSMD1-208ENST00000520561 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
CSMD1-208ENST00000520561 HLFQ16534 295 aa11.22□□□□□ -0.61
CSMD1-208ENST00000520561 CLEC4GQ6UXB4 293 aa11.22□□□□□ -0.61
CSMD1-208ENST00000520561 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
CSMD1-208ENST00000520561 USP44Q9H0E7 712 aa11.22□□□□□ -0.61
CSMD1-208ENST00000520561 USP42Q9H9J4 1324 aaKnown RBP11.22□□□□□ -0.61
CSMD1-208ENST00000520561 TFCP2L1Q9NZI6 479 aa11.22□□□□□ -0.61
CSMD1-208ENST00000520561 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.61
CSMD1-208ENST00000520561 UTYO14607 1347 aa11.21□□□□□ -0.61
CSMD1-208ENST00000520561 GPTP24298 496 aa11.21□□□□□ -0.61
CSMD1-208ENST00000520561 ZNF827Q17R98 1081 aa11.21□□□□□ -0.61
CSMD1-208ENST00000520561 PARP10Q53GL7 1025 aa11.21□□□□□ -0.61
CSMD1-208ENST00000520561 USPL1Q5W0Q7 1092 aa11.21□□□□□ -0.61
CSMD1-208ENST00000520561 FLAD1Q8NFF5 587 aa11.21□□□□□ -0.61
CSMD1-208ENST00000520561 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
CSMD1-208ENST00000520561 STK32BQ9NY57 414 aa11.21□□□□□ -0.61
CSMD1-208ENST00000520561 LRRFIP2Q9Y608 721 aaKnown RBP11.21□□□□□ -0.61
CSMD1-208ENST00000520561 HMMRO75330 724 aa11.2□□□□□ -0.62
CSMD1-208ENST00000520561 NBPF7P0C2Y1 421 aaPredicted RBP11.2□□□□□ -0.62
CSMD1-208ENST00000520561 UBE3BQ7Z3V4 1068 aa11.2□□□□□ -0.62
CSMD1-208ENST00000520561 DEFB132Q7Z7B7 95 aa11.2□□□□□ -0.62
CSMD1-208ENST00000520561 NLRP10Q86W26 655 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms