RNA–Protein interactions for RNA: ENST00000520495.5

MTCL1-209, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 2

Gene MTCL1, Length 3,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-209ENST00000520495 CD163L1Q9NR16 1453 aa18.38■□□□□ 0.53
MTCL1-209ENST00000520495 TTC6Q86TZ1 520 aa18.38■□□□□ 0.53
MTCL1-209ENST00000520495 NPHP1O15259 732 aa18.38■□□□□ 0.53
MTCL1-209ENST00000520495 SLU7O95391 586 aaKnown RBP18.38■□□□□ 0.53
MTCL1-209ENST00000520495 HAP1P54257 671 aaPredicted RBP18.38■□□□□ 0.53
MTCL1-209ENST00000520495 STAP2Q9UGK3 403 aa18.38■□□□□ 0.53
MTCL1-209ENST00000520495 VPS37CA5D8V6 355 aaPredicted RBP18.38■□□□□ 0.53
MTCL1-209ENST00000520495 CEBPAP49715 358 aaPredicted RBP18.38■□□□□ 0.53
MTCL1-209ENST00000520495 ERBB3P21860 1342 aa18.38■□□□□ 0.53
MTCL1-209ENST00000520495 CPSF1Q10570 1443 aaKnown RBP18.37■□□□□ 0.53
MTCL1-209ENST00000520495 ARHGEF28Q8N1W1 1705 aaKnown RBP18.37■□□□□ 0.53
MTCL1-209ENST00000520495 LARGE1O95461 756 aa18.37■□□□□ 0.53
MTCL1-209ENST00000520495 CCDC83Q8IWF9 413 aa18.37■□□□□ 0.53
MTCL1-209ENST00000520495 GTF3C6Q969F1 213 aa18.37■□□□□ 0.53
MTCL1-209ENST00000520495 DACT1Q9NYF0 836 aa18.37■□□□□ 0.53
MTCL1-209ENST00000520495 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.37■□□□□ 0.53
MTCL1-209ENST00000520495 IL13P35225 146 aa18.37■□□□□ 0.53
MTCL1-209ENST00000520495 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
MTCL1-209ENST00000520495 RASEFQ8IZ41 740 aa18.37■□□□□ 0.53
MTCL1-209ENST00000520495 CDC25BP30305 580 aa18.36■□□□□ 0.53
MTCL1-209ENST00000520495 ZNF165P49910 485 aa18.36■□□□□ 0.53
MTCL1-209ENST00000520495 RAD51AP2Q09MP3 1159 aa18.36■□□□□ 0.53
MTCL1-209ENST00000520495 ARID5BQ14865 1188 aa18.36■□□□□ 0.53
MTCL1-209ENST00000520495 RNF20Q5VTR2 975 aa18.36■□□□□ 0.53
MTCL1-209ENST00000520495 FHOD1Q9Y613 1164 aa18.36■□□□□ 0.53
MTCL1-209ENST00000520495 SLC4A10Q6U841 1118 aa18.36■□□□□ 0.53
MTCL1-209ENST00000520495 NEMFO60524 1076 aa18.35■□□□□ 0.53
MTCL1-209ENST00000520495 SKILP12757 684 aa18.35■□□□□ 0.53
MTCL1-209ENST00000520495 H2AFXP16104 143 aaPredicted RBP18.35■□□□□ 0.53
MTCL1-209ENST00000520495 KRT85P78386 507 aa18.35■□□□□ 0.53
MTCL1-209ENST00000520495 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
MTCL1-209ENST00000520495 PIK3C2BO00750 1634 aa18.35■□□□□ 0.53
MTCL1-209ENST00000520495 GNAI2P04899 355 aa18.35■□□□□ 0.53
MTCL1-209ENST00000520495 IRX3P78415 501 aaPredicted RBP18.35■□□□□ 0.53
MTCL1-209ENST00000520495 TRMT1Q9NXH9 659 aaKnown RBP18.35■□□□□ 0.53
MTCL1-209ENST00000520495 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
MTCL1-209ENST00000520495 CPA1P15085 419 aa18.34■□□□□ 0.53
MTCL1-209ENST00000520495 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
MTCL1-209ENST00000520495 DNAJC25Q9H1X3 360 aa18.34■□□□□ 0.53
MTCL1-209ENST00000520495 ELP1O95163 1332 aa18.34■□□□□ 0.53
MTCL1-209ENST00000520495 CERS3Q8IU89 383 aa18.34■□□□□ 0.53
MTCL1-209ENST00000520495 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.53
MTCL1-209ENST00000520495 RBM43Q6ZSC3 357 aaKnown RBP18.33■□□□□ 0.53
MTCL1-209ENST00000520495 ERCC6LQ2NKX8 1250 aa18.33■□□□□ 0.52
MTCL1-209ENST00000520495 F6X3S4 739 aa18.33■□□□□ 0.52
MTCL1-209ENST00000520495 CASTP20810 708 aaKnown RBP18.33■□□□□ 0.52
MTCL1-209ENST00000520495 DDX19AQ9NUU7 478 aaKnown RBP18.33■□□□□ 0.52
MTCL1-209ENST00000520495 GOLGA6L4A6NEF3 574 aa18.32■□□□□ 0.52
MTCL1-209ENST00000520495 SGSM2O43147 1006 aa18.32■□□□□ 0.52
MTCL1-209ENST00000520495 CCAR2Q8N163 923 aaKnown RBP18.32■□□□□ 0.52
MTCL1-209ENST00000520495 CLSTN2Q9H4D0 955 aa18.32■□□□□ 0.52
MTCL1-209ENST00000520495 TUBGCP6Q96RT7 1819 aa18.32■□□□□ 0.52
MTCL1-209ENST00000520495 CCT4P50991 539 aaKnown RBP18.32■□□□□ 0.52
MTCL1-209ENST00000520495 FAM173BQ6P4H8 233 aa18.32■□□□□ 0.52
MTCL1-209ENST00000520495 PAXIP1Q6ZW49 1069 aaPredicted RBP18.32■□□□□ 0.52
MTCL1-209ENST00000520495 LSG1Q9H089 658 aaKnown RBP18.32■□□□□ 0.52
MTCL1-209ENST00000520495 PLA2G4AP47712 749 aa18.31■□□□□ 0.52
MTCL1-209ENST00000520495 CLCN6P51797 869 aa18.31■□□□□ 0.52
MTCL1-209ENST00000520495 PNMA6EA0A0J9YXQ4 647 aa18.31■□□□□ 0.52
MTCL1-209ENST00000520495 PNMA6AP0CW24 399 aaPredicted RBP18.31■□□□□ 0.52
MTCL1-209ENST00000520495 FERMT3Q86UX7 667 aa18.31■□□□□ 0.52
MTCL1-209ENST00000520495 NUDT16Q96DE0 195 aaKnown RBP18.31■□□□□ 0.52
MTCL1-209ENST00000520495 CHL1O00533 1208 aa18.31■□□□□ 0.52
MTCL1-209ENST00000520495 MAP4K4O95819 1239 aaPredicted RBP18.31■□□□□ 0.52
MTCL1-209ENST00000520495 KIF13AQ9H1H9 1805 aa18.3■□□□□ 0.52
MTCL1-209ENST00000520495 LARP1BQ659C4 914 aaKnown RBP18.3■□□□□ 0.52
MTCL1-209ENST00000520495 MRFAP1L1Q96HT8 127 aa18.3■□□□□ 0.52
MTCL1-209ENST00000520495 ZSCAN31Q96LW9 406 aaPredicted RBP18.3■□□□□ 0.52
MTCL1-209ENST00000520495 CCDC69A6NI79 296 aa18.3■□□□□ 0.52
MTCL1-209ENST00000520495 TNNT3P45378 269 aaPredicted RBP18.3■□□□□ 0.52
MTCL1-209ENST00000520495 CCZ1BP86790 482 aa18.3■□□□□ 0.52
MTCL1-209ENST00000520495 CCZ1P86791 482 aaPredicted RBP18.3■□□□□ 0.52
MTCL1-209ENST00000520495 TEX35Q5T0J7 233 aa18.3■□□□□ 0.52
MTCL1-209ENST00000520495 SARM1Q6SZW1 724 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 COG3Q96JB2 828 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 SH2B1Q9NRF2 756 aaPredicted RBP18.29■□□□□ 0.52
MTCL1-209ENST00000520495 AOX1Q06278 1338 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 PTPRMP28827 1452 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 KIF2AO00139 706 aaPredicted RBP18.29■□□□□ 0.52
MTCL1-209ENST00000520495 G2E3Q7L622 706 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 NEK11Q8NG66 645 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 PDRG1Q9NUG6 133 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 TTC21AQ8NDW8 1320 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 METP08581 1390 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 GOLGA6L19H0YKK7 550 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 ATP8B2P98198 1209 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 L2HGDHQ9H9P8 463 aa18.29■□□□□ 0.52
MTCL1-209ENST00000520495 CDK12Q9NYV4 1490 aaPredicted RBP18.28■□□□□ 0.52
MTCL1-209ENST00000520495 WASLO00401 505 aaPredicted RBP18.28■□□□□ 0.52
MTCL1-209ENST00000520495 ST3GAL1Q11201 340 aa18.28■□□□□ 0.52
MTCL1-209ENST00000520495 NUTM2GQ5VZR2 741 aa18.28■□□□□ 0.52
MTCL1-209ENST00000520495 CDC37L1Q7L3B6 337 aa18.28■□□□□ 0.52
MTCL1-209ENST00000520495 USP16Q9Y5T5 823 aa18.28■□□□□ 0.52
MTCL1-209ENST00000520495 NR1I2O75469 434 aa18.28■□□□□ 0.52
MTCL1-209ENST00000520495 CAVIN2O95810 425 aa18.28■□□□□ 0.52
MTCL1-209ENST00000520495 VPS53Q5VIR6 699 aa18.28■□□□□ 0.52
MTCL1-209ENST00000520495 FILIP1Q7Z7B0 1213 aa18.28■□□□□ 0.52
MTCL1-209ENST00000520495 SPATA32Q96LK8 384 aa18.28■□□□□ 0.52
MTCL1-209ENST00000520495 SCAND2PQ9GZW5 306 aaPredicted RBP18.28■□□□□ 0.52
MTCL1-209ENST00000520495 EFCC1Q9HA90 598 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms