RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 HSPA2P54652 639 aa10.72□□□□□ -0.69
CTHRC1-203ENST00000520337 RTL5Q5HYW3 569 aaPredicted RBP10.72□□□□□ -0.69
CTHRC1-203ENST00000520337 CARD14Q9BXL6 1004 aa10.72□□□□□ -0.69
CTHRC1-203ENST00000520337 ATP13A2Q9NQ11 1180 aa10.72□□□□□ -0.69
CTHRC1-203ENST00000520337 GMPR2Q9P2T1 348 aaKnown RBP10.72□□□□□ -0.69
CTHRC1-203ENST00000520337 RGPD8O14715 1765 aaPredicted RBP10.72□□□□□ -0.69
CTHRC1-203ENST00000520337 STRCP1A6NGW2 1772 aa10.71□□□□□ -0.69
CTHRC1-203ENST00000520337 WASLO00401 505 aaPredicted RBP10.71□□□□□ -0.69
CTHRC1-203ENST00000520337 SRPK2P78362 688 aaKnown RBP10.71□□□□□ -0.69
CTHRC1-203ENST00000520337 NWD1Q149M9 1564 aa10.71□□□□□ -0.69
CTHRC1-203ENST00000520337 FAM174AQ8TBP5 190 aa10.71□□□□□ -0.69
CTHRC1-203ENST00000520337 ATAD2Q6PL18 1390 aa10.7□□□□□ -0.7
CTHRC1-203ENST00000520337 CENPBP07199 599 aaPredicted RBP10.7□□□□□ -0.7
CTHRC1-203ENST00000520337 FAM117AQ9C073 453 aa10.7□□□□□ -0.7
CTHRC1-203ENST00000520337 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
CTHRC1-203ENST00000520337 CD163L1Q9NR16 1453 aa10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 PARD3Q8TEW0 1356 aa10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 NINLQ9Y2I6 1382 aa10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 NBPF14Q5TI25 921 aa10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 BPHLQ86WA6 291 aaPredicted RBP10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 TMC1Q8TDI8 760 aa10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 AKAP12Q02952 1782 aa10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 NALCNQ8IZF0 1738 aa10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 TOPAZ1Q8N9V7 1692 aa10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 USP32Q8NFA0 1604 aa10.69□□□□□ -0.7
CTHRC1-203ENST00000520337 KTN1Q86UP2 1357 aaKnown RBP10.68□□□□□ -0.7
CTHRC1-203ENST00000520337 NPC1L1Q9UHC9 1359 aa10.68□□□□□ -0.7
CTHRC1-203ENST00000520337 RALBP1Q15311 655 aa10.68□□□□□ -0.7
CTHRC1-203ENST00000520337 CCDC184Q52MB2 194 aa10.68□□□□□ -0.7
CTHRC1-203ENST00000520337 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.68□□□□□ -0.7
CTHRC1-203ENST00000520337 KNSTRNQ9Y448 316 aa10.68□□□□□ -0.7
CTHRC1-203ENST00000520337 TLL2Q9Y6L7 1015 aa10.68□□□□□ -0.7
CTHRC1-203ENST00000520337 FMN2Q9NZ56 1722 aa10.67□□□□□ -0.7
CTHRC1-203ENST00000520337 ANKRD36BQ8N2N9 1353 aa10.67□□□□□ -0.7
CTHRC1-203ENST00000520337 PRR36Q9H6K5 1346 aa10.67□□□□□ -0.7
CTHRC1-203ENST00000520337 WFS1O76024 890 aa10.67□□□□□ -0.7
CTHRC1-203ENST00000520337 PPP2R2DQ66LE6 453 aa10.67□□□□□ -0.7
CTHRC1-203ENST00000520337 KIFC2Q96AC6 838 aa10.67□□□□□ -0.7
CTHRC1-203ENST00000520337 NUDT16Q96DE0 195 aaKnown RBP10.67□□□□□ -0.7
CTHRC1-203ENST00000520337 ATP7BP35670 1465 aa10.67□□□□□ -0.7
CTHRC1-203ENST00000520337 NFX1Q12986 1120 aaKnown RBP10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 CNGB1Q14028 1251 aaPredicted RBP10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 CC2D1BQ5T0F9 858 aaKnown RBP10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 GPKOWQ92917 476 aaPredicted RBP eCLIP10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 FOXJ1Q92949 421 aa10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 TRIM47Q96LD4 638 aa10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 CDK15Q96Q40 435 aa10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 CABP1Q9NZU7 370 aa10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 ITSN1Q15811 1721 aa10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 MON2Q7Z3U7 1717 aa10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 NSD3Q9BZ95 1437 aa10.66□□□□□ -0.7
CTHRC1-203ENST00000520337 A0A1W2PP64 1363 aa10.65□□□□□ -0.7
CTHRC1-203ENST00000520337 AGERQ15109 404 aa10.65□□□□□ -0.7
CTHRC1-203ENST00000520337 CPSF1Q10570 1443 aaKnown RBP10.65□□□□□ -0.7
CTHRC1-203ENST00000520337 XIRP1Q702N8 1843 aaKnown RBP10.65□□□□□ -0.71
CTHRC1-203ENST00000520337 KIF20BQ96Q89 1820 aa10.65□□□□□ -0.71
CTHRC1-203ENST00000520337 ANKRD26Q9UPS8 1709 aa10.64□□□□□ -0.71
CTHRC1-203ENST00000520337 CAPN5O15484 640 aaPredicted RBP10.64□□□□□ -0.71
CTHRC1-203ENST00000520337 ADH1CP00326 375 aa10.64□□□□□ -0.71
CTHRC1-203ENST00000520337 NNTQ13423 1086 aa10.64□□□□□ -0.71
CTHRC1-203ENST00000520337 TERF2IPQ9NYB0 399 aa10.64□□□□□ -0.71
CTHRC1-203ENST00000520337 PPIP5K1Q6PFW1 1433 aa10.64□□□□□ -0.71
CTHRC1-203ENST00000520337 CDC42BPGQ6DT37 1551 aa10.64□□□□□ -0.71
CTHRC1-203ENST00000520337 MYBBP1AQ9BQG0 1328 aaKnown RBP10.63□□□□□ -0.71
CTHRC1-203ENST00000520337 NKTRP30414 1462 aaKnown RBP10.63□□□□□ -0.71
CTHRC1-203ENST00000520337 WIPF1O43516 503 aa10.63□□□□□ -0.71
CTHRC1-203ENST00000520337 CTDSPL2Q05D32 466 aa10.63□□□□□ -0.71
CTHRC1-203ENST00000520337 SH3RF1Q7Z6J0 888 aa10.63□□□□□ -0.71
CTHRC1-203ENST00000520337 ADGRL3Q9HAR2 1447 aa10.63□□□□□ -0.71
CTHRC1-203ENST00000520337 GOPCQ9HD26 462 aa10.62□□□□□ -0.71
CTHRC1-203ENST00000520337 ANKARQ7Z5J8 1434 aa10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 C4orf48Q5BLP8 95 aa10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 LCE2CQ5TA81 110 aa10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 SH3BP5LQ7L8J4 393 aa10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 HDGFL2Q7Z4V5 671 aaPredicted RBP10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 PROCA1Q8NCQ7 364 aaPredicted RBP10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 C1QTNF2Q9BXJ5 285 aa10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 MRS2Q9HD23 443 aa10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 STK17AQ9UEE5 414 aa10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 BRD4O60885 1362 aaPredicted RBP10.61□□□□□ -0.71
CTHRC1-203ENST00000520337 CGNL1Q0VF96 1302 aa10.6□□□□□ -0.71
CTHRC1-203ENST00000520337 PPP2R1AP30153 589 aa10.6□□□□□ -0.71
CTHRC1-203ENST00000520337 NR5A1Q13285 461 aa10.6□□□□□ -0.71
CTHRC1-203ENST00000520337 NLRP13Q86W25 1043 aa10.6□□□□□ -0.71
CTHRC1-203ENST00000520337 PROSER2Q86WR7 435 aaPredicted RBP10.6□□□□□ -0.71
CTHRC1-203ENST00000520337 NRKQ7Z2Y5 1582 aa10.6□□□□□ -0.71
CTHRC1-203ENST00000520337 ZC3H4Q9UPT8 1303 aaKnown RBP10.59□□□□□ -0.71
CTHRC1-203ENST00000520337 FYB1O15117 783 aa10.59□□□□□ -0.71
CTHRC1-203ENST00000520337 TRMT44Q8IYL2 757 aaKnown RBP10.59□□□□□ -0.71
CTHRC1-203ENST00000520337 YTHDC1Q96MU7 727 aaKnown RBP10.59□□□□□ -0.71
CTHRC1-203ENST00000520337 MAP4K5Q9Y4K4 846 aa10.59□□□□□ -0.71
CTHRC1-203ENST00000520337 NSD2O96028 1365 aa10.59□□□□□ -0.71
CTHRC1-203ENST00000520337 ACEP12821 1306 aa10.58□□□□□ -0.71
CTHRC1-203ENST00000520337 EDC4Q6P2E9 1401 aaKnown RBP10.58□□□□□ -0.72
CTHRC1-203ENST00000520337 NCOA3Q9Y6Q9 1424 aa10.58□□□□□ -0.72
CTHRC1-203ENST00000520337 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
CTHRC1-203ENST00000520337 POLR3AO14802 1390 aaPredicted RBP10.58□□□□□ -0.72
CTHRC1-203ENST00000520337 SNRPBP14678 240 aaKnown RBP10.58□□□□□ -0.72
CTHRC1-203ENST00000520337 ARID5BQ14865 1188 aa10.58□□□□□ -0.72
CTHRC1-203ENST00000520337 PNISRQ8TF01 805 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms