RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 ZNF652Q9Y2D9 606 aa22.19■■□□□ 1.14
CLK4-204ENST00000520126 PDIA6Q15084 440 aa22.18■■□□□ 1.14
CLK4-204ENST00000520126 DDX21Q9NR30 783 aaKnown RBP eCLIP22.18■■□□□ 1.14
CLK4-204ENST00000520126 SRCAPQ6ZRS2 3230 aa22.18■■□□□ 1.14
CLK4-204ENST00000520126 DDR1Q08345 913 aa22.17■■□□□ 1.14
CLK4-204ENST00000520126 COPS6Q7L5N1 327 aa22.17■■□□□ 1.14
CLK4-204ENST00000520126 XAGE3Q8WTP9 111 aa22.17■■□□□ 1.14
CLK4-204ENST00000520126 SETDB2Q96T68 719 aa22.17■■□□□ 1.14
CLK4-204ENST00000520126 DBF4Q9UBU7 674 aaPredicted RBP22.17■■□□□ 1.14
CLK4-204ENST00000520126 FAM177BA6PVY3 158 aa22.16■■□□□ 1.14
CLK4-204ENST00000520126 TM4SF1P30408 202 aa22.16■■□□□ 1.14
CLK4-204ENST00000520126 HLFQ16534 295 aa22.16■■□□□ 1.14
CLK4-204ENST00000520126 CCDC30Q5VVM6 783 aa22.16■■□□□ 1.14
CLK4-204ENST00000520126 PELP1Q8IZL8 1130 aaKnown RBP22.15■■□□□ 1.14
CLK4-204ENST00000520126 STK31Q9BXU1 1019 aa22.15■■□□□ 1.14
CLK4-204ENST00000520126 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
CLK4-204ENST00000520126 MAP3K15Q6ZN16 1313 aa22.15■■□□□ 1.14
CLK4-204ENST00000520126 ZNF521Q96K83 1311 aa22.15■■□□□ 1.14
CLK4-204ENST00000520126 POLRMTO00411 1230 aaKnown RBP22.14■■□□□ 1.14
CLK4-204ENST00000520126 SERPINB2P05120 415 aa22.14■■□□□ 1.14
CLK4-204ENST00000520126 NLGN2Q8NFZ4 835 aa22.14■■□□□ 1.14
CLK4-204ENST00000520126 CDCA7LQ96GN5 454 aa22.14■■□□□ 1.14
CLK4-204ENST00000520126 HYPKQ9NX55 129 aa22.14■■□□□ 1.14
CLK4-204ENST00000520126 NIP7Q9Y221 180 aaKnown RBP eCLIP22.14■■□□□ 1.14
CLK4-204ENST00000520126 E9PSI1 815 aa22.13■■□□□ 1.13
CLK4-204ENST00000520126 HOXD11P31277 338 aaPredicted RBP22.13■■□□□ 1.13
CLK4-204ENST00000520126 WWC3Q9ULE0 1092 aa22.13■■□□□ 1.13
CLK4-204ENST00000520126 DCAF8L1A6NGE4 600 aa22.12■■□□□ 1.13
CLK4-204ENST00000520126 GPTP24298 496 aa22.12■■□□□ 1.13
CLK4-204ENST00000520126 CLEC4GQ6UXB4 293 aa22.12■■□□□ 1.13
CLK4-204ENST00000520126 CCDC24Q8N4L8 307 aa22.12■■□□□ 1.13
CLK4-204ENST00000520126 COL24A1Q17RW2 1714 aa22.12■■□□□ 1.13
CLK4-204ENST00000520126 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
CLK4-204ENST00000520126 PHAXQ9H814 394 aaKnown RBP22.11■■□□□ 1.13
CLK4-204ENST00000520126 CD2APQ9Y5K6 639 aa22.11■■□□□ 1.13
CLK4-204ENST00000520126 SLFN5Q08AF3 891 aa22.1■■□□□ 1.13
CLK4-204ENST00000520126 LRP10Q7Z4F1 713 aa22.1■■□□□ 1.13
CLK4-204ENST00000520126 SCN7AQ01118 1682 aa22.1■■□□□ 1.13
CLK4-204ENST00000520126 VAMP4O75379 141 aa22.09■■□□□ 1.13
CLK4-204ENST00000520126 GTF2E1P29083 439 aaPredicted RBP22.09■■□□□ 1.13
CLK4-204ENST00000520126 NBPF5PQ86XG9 351 aaPredicted RBP22.09■■□□□ 1.13
CLK4-204ENST00000520126 CARMIL3Q8ND23 1372 aa22.09■■□□□ 1.13
CLK4-204ENST00000520126 SLC4A2P04920 1241 aa22.08■■□□□ 1.13
CLK4-204ENST00000520126 ANKRD13DQ6ZTN6 518 aa22.08■■□□□ 1.13
CLK4-204ENST00000520126 RIC3Q7Z5B4 369 aa22.08■■□□□ 1.13
CLK4-204ENST00000520126 ZNF428Q96B54 188 aa22.08■■□□□ 1.13
CLK4-204ENST00000520126 GIGYF2Q6Y7W6 1299 aaKnown RBP22.07■■□□□ 1.12
CLK4-204ENST00000520126 CNBD1Q8NA66 436 aa22.07■■□□□ 1.12
CLK4-204ENST00000520126 A0A0G2JLW4 131 aa22.06■■□□□ 1.12
CLK4-204ENST00000520126 GPR162Q16538 588 aa22.06■■□□□ 1.12
CLK4-204ENST00000520126 BCORQ6W2J9 1755 aa22.06■■□□□ 1.12
CLK4-204ENST00000520126 ST5P78524 1137 aa22.06■■□□□ 1.12
CLK4-204ENST00000520126 DDX58O95786 925 aaKnown RBP22.05■■□□□ 1.12
CLK4-204ENST00000520126 TPTE2Q6XPS3 522 aa22.05■■□□□ 1.12
CLK4-204ENST00000520126 PLBD2Q8NHP8 589 aa22.05■■□□□ 1.12
CLK4-204ENST00000520126 HSP90AB3PQ58FF7 597 aa22.04■■□□□ 1.12
CLK4-204ENST00000520126 PRR5LQ6MZQ0 368 aa22.04■■□□□ 1.12
CLK4-204ENST00000520126 DPEP1P16444 411 aa22.03■■□□□ 1.12
CLK4-204ENST00000520126 TGFB2P61812 414 aa22.03■■□□□ 1.12
CLK4-204ENST00000520126 G2E3Q7L622 706 aa22.03■■□□□ 1.12
CLK4-204ENST00000520126 RNF216Q9NWF9 866 aaPredicted RBP22.03■■□□□ 1.12
CLK4-204ENST00000520126 C10orf71Q711Q0 1435 aa22.02■■□□□ 1.12
CLK4-204ENST00000520126 ATP5J2-PTCD1G3V325 749 aa22.02■■□□□ 1.12
CLK4-204ENST00000520126 RGL2O15211 777 aa22.02■■□□□ 1.12
CLK4-204ENST00000520126 CHRNA5P30532 468 aa22.02■■□□□ 1.12
CLK4-204ENST00000520126 TCIRG1Q13488 830 aa22.02■■□□□ 1.12
CLK4-204ENST00000520126 SUSD4Q5VX71 490 aa22.02■■□□□ 1.12
CLK4-204ENST00000520126 NUTM1Q86Y26 1132 aa22.02■■□□□ 1.12
CLK4-204ENST00000520126 ZNF34Q8IZ26 560 aa22.02■■□□□ 1.12
CLK4-204ENST00000520126 NYXQ9GZU5 481 aa22.02■■□□□ 1.12
CLK4-204ENST00000520126 UBN2Q6ZU65 1347 aa22.01■■□□□ 1.11
CLK4-204ENST00000520126 FKBP5Q13451 457 aaPredicted RBP22.01■■□□□ 1.11
CLK4-204ENST00000520126 PPP1R42Q7Z4L9 355 aa22.01■■□□□ 1.11
CLK4-204ENST00000520126 C2CD5Q86YS7 1000 aa22.01■■□□□ 1.11
CLK4-204ENST00000520126 MYD88Q99836 296 aa22.01■■□□□ 1.11
CLK4-204ENST00000520126 NUP98P52948 1817 aa22■■□□□ 1.11
CLK4-204ENST00000520126 AFDNP55196 1824 aaKnown RBP22■■□□□ 1.11
CLK4-204ENST00000520126 ATP10DQ9P241 1426 aa21.99■■□□□ 1.11
CLK4-204ENST00000520126 H0YIN7 160 aa21.99■■□□□ 1.11
CLK4-204ENST00000520126 PDE6BP35913 854 aa21.99■■□□□ 1.11
CLK4-204ENST00000520126 FLIIQ13045 1269 aa21.99■■□□□ 1.11
CLK4-204ENST00000520126 PARP10Q53GL7 1025 aa21.99■■□□□ 1.11
CLK4-204ENST00000520126 ZNF622Q969S3 477 aaKnown RBP eCLIP21.99■■□□□ 1.11
CLK4-204ENST00000520126 UTP14AQ9BVJ6 771 aaKnown RBP21.99■■□□□ 1.11
CLK4-204ENST00000520126 BCS1LQ9Y276 419 aa21.99■■□□□ 1.11
CLK4-204ENST00000520126 MAP3K2Q9Y2U5 619 aa21.99■■□□□ 1.11
CLK4-204ENST00000520126 PI4KAP2A4QPH2 592 aa21.98■■□□□ 1.11
CLK4-204ENST00000520126 ERFEQ4G0M1 354 aa21.98■■□□□ 1.11
CLK4-204ENST00000520126 PI4KAP1Q8N8J0 262 aa21.98■■□□□ 1.11
CLK4-204ENST00000520126 BRIP1Q9BX63 1249 aa21.98■■□□□ 1.11
CLK4-204ENST00000520126 BCL2L13Q9BXK5 485 aa21.98■■□□□ 1.11
CLK4-204ENST00000520126 TRMT112Q9UI30 125 aaKnown RBP21.98■■□□□ 1.11
CLK4-204ENST00000520126 RTL5Q5HYW3 569 aaPredicted RBP21.97■■□□□ 1.11
CLK4-204ENST00000520126 KSR2Q6VAB6 950 aa21.97■■□□□ 1.11
CLK4-204ENST00000520126 NLRP10Q86W26 655 aa21.97■■□□□ 1.11
CLK4-204ENST00000520126 TRMT2AQ8IZ69 625 aaKnown RBP21.97■■□□□ 1.11
CLK4-204ENST00000520126 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
CLK4-204ENST00000520126 N4BP2Q86UW6 1770 aaPredicted RBP21.96■■□□□ 1.11
CLK4-204ENST00000520126 PIM2Q9P1W9 311 aa21.96■■□□□ 1.11
CLK4-204ENST00000520126 NEXNQ0ZGT2 675 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms