RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 QTRT2Q9H974 415 aaKnown RBP7□□□□□ -1.29
CTNNA1-212ENST00000518919 HCSTQ9UBK5 93 aa7□□□□□ -1.29
CTNNA1-212ENST00000518919 USP3Q9Y6I4 520 aa7□□□□□ -1.29
CTNNA1-212ENST00000518919 KIAA0556O60303 1618 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 FZD6O60353 706 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 ADH1AP07327 375 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 MAPK8P45983 427 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 MYO19Q96H55 970 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 NGLY1Q96IV0 654 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 CCDC87Q9NVE4 849 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 MAGI3Q5TCQ9 1506 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 EHBP1L1Q8N3D4 1523 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 DISP1Q96F81 1524 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 KIAA0586Q9BVV6 1533 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 CEP170Q5SW79 1584 aa6.99□□□□□ -1.29
CTNNA1-212ENST00000518919 SYNJ2O15056 1496 aa6.98□□□□□ -1.29
CTNNA1-212ENST00000518919 WNT7AO00755 349 aa6.98□□□□□ -1.29
CTNNA1-212ENST00000518919 FGD1P98174 961 aa6.98□□□□□ -1.29
CTNNA1-212ENST00000518919 PDE3BQ13370 1112 aa6.98□□□□□ -1.29
CTNNA1-212ENST00000518919 CNKSR1Q969H4 720 aa6.98□□□□□ -1.29
CTNNA1-212ENST00000518919 XAGE2Q96GT9 111 aa6.98□□□□□ -1.29
CTNNA1-212ENST00000518919 NUP160Q12769 1436 aa6.98□□□□□ -1.29
CTNNA1-212ENST00000518919 HECW1Q76N89 1606 aa6.98□□□□□ -1.29
CTNNA1-212ENST00000518919 DHX57Q6P158 1386 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 ARHGEF11O15085 1522 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 SERTM1A2A2V5 107 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 CDK2AP1O14519 115 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 LDHBP07195 334 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 XPCQ01831 940 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 EHHADHQ08426 723 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 LIAT1Q6ZQX7 453 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 MRGPRX2Q96LB1 330 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 C8orf37Q96NL8 207 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 FAM129BQ96TA1 746 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 ESYT1Q9BSJ8 1104 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 LRFN2Q9ULH4 789 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 ZNF232Q9UNY5 417 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 IQSEC3Q9UPP2 1182 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 CCDC18Q5T9S5 1454 aa6.97□□□□□ -1.29
CTNNA1-212ENST00000518919 EML1O00423 815 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 GPR182O15218 404 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 PRPF40AO75400 957 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 BRD2P25440 801 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 ITGAEP38570 1179 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 ATP2B2Q01814 1243 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 PLCB3Q01970 1234 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 CLN3Q13286 438 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 MRPL58Q14197 206 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 DSC3Q14574 896 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 POTEAQ6S8J7 498 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 MRS2Q9HD23 443 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 CABP1Q9NZU7 370 aa6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 CDK13Q14004 1512 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-212ENST00000518919 FGD6Q6ZV73 1430 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 HIRAP54198 1017 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 NNTQ13423 1086 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 TEAD4Q15561 434 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 RTN1Q16799 776 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 SH3PXD2AQ5TCZ1 1133 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 ATCAYQ86WG3 371 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 ZDHHC1Q8WTX9 485 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 RNF166Q96A37 237 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 WASF2Q9Y6W5 498 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 NCOA2Q15596 1464 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 EPRSP07814 1512 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 MTUS2Q5JR59 1369 aa6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.95□□□□□ -1.3
CTNNA1-212ENST00000518919 MEN1O00255 615 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 ZBTB39O15060 712 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 ALDH1A1P00352 501 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 CBLBQ13191 982 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 DGKZQ13574 1117 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 ALDH16A1Q8IZ83 802 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 ALKBH8Q96BT7 664 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 NLRP3Q96P20 1036 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 DUSP9Q99956 384 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 BACH2Q9BYV9 841 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 FHDC1Q9C0D6 1143 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 PARP2Q9UGN5 583 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 POLIQ9UNA4 740 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 HRH3Q9Y5N1 445 aa6.94□□□□□ -1.3
CTNNA1-212ENST00000518919 MYOM3Q5VTT5 1437 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 NUP153P49790 1475 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 MAPKBP1O60336 1514 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 SCAMP3O14828 347 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 IGHA2P01877 340 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 MZF1P28698 734 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 ERCC5P28715 1186 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 NOS2P35228 1153 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 SLC19A1P41440 591 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 USP5P45974 858 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 DNM1Q05193 864 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 FAM26DQ5JW98 314 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 ETFBKMTQ8IXQ9 262 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 GJD3Q8N144 294 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 SREK1Q8WXA9 508 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 EDEM1Q92611 657 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 L3MBTL2Q969R5 705 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 EMID1Q96A84 441 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms