RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 PPP1R42Q7Z4L9 355 aa12.12□□□□□ -0.47
MTCL1-207ENST00000518815 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
MTCL1-207ENST00000518815 GLRX3O76003 335 aaKnown RBP12.12□□□□□ -0.47
MTCL1-207ENST00000518815 SSFA2P28290 1259 aa12.12□□□□□ -0.47
MTCL1-207ENST00000518815 EIF4A1P60842 406 aaKnown RBP12.12□□□□□ -0.47
MTCL1-207ENST00000518815 MCTP1Q6DN14 999 aa12.12□□□□□ -0.47
MTCL1-207ENST00000518815 SSH3Q8TE77 659 aa12.12□□□□□ -0.47
MTCL1-207ENST00000518815 LRRC59Q96AG4 307 aaKnown RBP12.12□□□□□ -0.47
MTCL1-207ENST00000518815 KIF2CQ99661 725 aa12.12□□□□□ -0.47
MTCL1-207ENST00000518815 ROBO1Q9Y6N7 1651 aa12.12□□□□□ -0.47
MTCL1-207ENST00000518815 BAG4O95429 457 aaKnown RBP12.11□□□□□ -0.47
MTCL1-207ENST00000518815 MBD3O95983 291 aa12.11□□□□□ -0.47
MTCL1-207ENST00000518815 ZKSCAN1P17029 563 aaPredicted RBP12.11□□□□□ -0.47
MTCL1-207ENST00000518815 ABCA3Q99758 1704 aa12.11□□□□□ -0.47
MTCL1-207ENST00000518815 RBM10P98175 930 aaKnown RBP12.11□□□□□ -0.47
MTCL1-207ENST00000518815 KLHL40Q2TBA0 621 aa12.11□□□□□ -0.47
MTCL1-207ENST00000518815 RHPN1Q8TCX5 695 aa12.11□□□□□ -0.47
MTCL1-207ENST00000518815 DDX17Q92841 729 aaKnown RBP12.11□□□□□ -0.47
MTCL1-207ENST00000518815 PANK2Q9BZ23 570 aa12.11□□□□□ -0.47
MTCL1-207ENST00000518815 APPP05067 770 aa12.11□□□□□ -0.47
MTCL1-207ENST00000518815 UBE2Q2Q8WVN8 375 aa12.11□□□□□ -0.47
MTCL1-207ENST00000518815 ERBB3P21860 1342 aa12.11□□□□□ -0.47
MTCL1-207ENST00000518815 DDIT3P35638 169 aa12.11□□□□□ -0.47
MTCL1-207ENST00000518815 COL22A1Q8NFW1 1626 aaPredicted RBP12.1□□□□□ -0.47
MTCL1-207ENST00000518815 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 CHPF2Q9P2E5 772 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 RNMTO43148 476 aaKnown RBP12.1□□□□□ -0.47
MTCL1-207ENST00000518815 TOM1O60784 492 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 PHF14O94880 888 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 MAP4K4O95819 1239 aaPredicted RBP12.1□□□□□ -0.47
MTCL1-207ENST00000518815 CHMLP26374 656 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 CSPP1Q1MSJ5 1256 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 ATP6V1DQ9Y5K8 247 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 TTC41PQ6P2S7 1318 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 FSD2A1L4K1 749 aa12.1□□□□□ -0.47
MTCL1-207ENST00000518815 ANXA1P04083 346 aa12.09□□□□□ -0.47
MTCL1-207ENST00000518815 PNMA6EA0A0J9YXQ4 647 aa12.09□□□□□ -0.47
MTCL1-207ENST00000518815 KSR2Q6VAB6 950 aa12.09□□□□□ -0.47
MTCL1-207ENST00000518815 CLEC17AQ6ZS10 378 aa12.09□□□□□ -0.47
MTCL1-207ENST00000518815 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
MTCL1-207ENST00000518815 OVOS2A0A0G2JMS6 1433 aa12.09□□□□□ -0.47
MTCL1-207ENST00000518815 RGPD5Q99666 1765 aa12.09□□□□□ -0.47
MTCL1-207ENST00000518815 G3V3G9 751 aa12.09□□□□□ -0.47
MTCL1-207ENST00000518815 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
MTCL1-207ENST00000518815 TMX4Q9H1E5 349 aaPredicted RBP12.09□□□□□ -0.47
MTCL1-207ENST00000518815 LRRC37A3O60309 1634 aa12.09□□□□□ -0.47
MTCL1-207ENST00000518815 KAT6BQ8WYB5 2073 aa12.08□□□□□ -0.48
MTCL1-207ENST00000518815 XRCC6P12956 609 aaKnown RBP eCLIP12.08□□□□□ -0.48
MTCL1-207ENST00000518815 PHAXQ9H814 394 aaKnown RBP12.08□□□□□ -0.48
MTCL1-207ENST00000518815 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
MTCL1-207ENST00000518815 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.08□□□□□ -0.48
MTCL1-207ENST00000518815 CEMIPQ8WUJ3 1361 aa12.08□□□□□ -0.48
MTCL1-207ENST00000518815 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
MTCL1-207ENST00000518815 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
MTCL1-207ENST00000518815 FSD1Q9BTV5 496 aa12.08□□□□□ -0.48
MTCL1-207ENST00000518815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
MTCL1-207ENST00000518815 RGPD2P0DJD1 1756 aa12.08□□□□□ -0.48
MTCL1-207ENST00000518815 PDIA4P13667 645 aaKnown RBP12.07□□□□□ -0.48
MTCL1-207ENST00000518815 MPNDQ8N594 471 aa12.07□□□□□ -0.48
MTCL1-207ENST00000518815 WDR33Q9C0J8 1336 aaKnown RBP12.07□□□□□ -0.48
MTCL1-207ENST00000518815 ADAMTS2O95450 1211 aa12.07□□□□□ -0.48
MTCL1-207ENST00000518815 CCDC173Q0VFZ6 552 aa12.07□□□□□ -0.48
MTCL1-207ENST00000518815 CABLES1Q8TDN4 633 aa12.07□□□□□ -0.48
MTCL1-207ENST00000518815 DNAJC2Q99543 621 aaKnown RBP12.07□□□□□ -0.48
MTCL1-207ENST00000518815 R3HCC1Q9Y3T6 440 aaKnown RBP12.07□□□□□ -0.48
MTCL1-207ENST00000518815 POLA2Q14181 598 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 RNF20Q5VTR2 975 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 VPS37DQ86XT2 251 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 LGR6Q9HBX8 967 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 MAP3K2Q9Y2U5 619 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 ESPNB1AK53 854 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 WASHC4Q2M389 1173 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 BEND3Q5T5X7 828 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 FAM184AQ8NB25 1140 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 TMX3Q96JJ7 454 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 ECHDC1Q9NTX5 307 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 AXIN2Q9Y2T1 843 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 CD2BP2O95400 341 aaKnown RBP12.06□□□□□ -0.48
MTCL1-207ENST00000518815 NASPP49321 788 aaPredicted RBP12.06□□□□□ -0.48
MTCL1-207ENST00000518815 DRC7Q8IY82 874 aa12.06□□□□□ -0.48
MTCL1-207ENST00000518815 H3BQV1 296 aa12.05□□□□□ -0.48
MTCL1-207ENST00000518815 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
MTCL1-207ENST00000518815 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
MTCL1-207ENST00000518815 ZSCAN31Q96LW9 406 aaPredicted RBP12.05□□□□□ -0.48
MTCL1-207ENST00000518815 RRAGDQ9NQL2 400 aaPredicted RBP12.05□□□□□ -0.48
MTCL1-207ENST00000518815 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
MTCL1-207ENST00000518815 PHLPP1O60346 1717 aa12.05□□□□□ -0.48
MTCL1-207ENST00000518815 COL14A1Q05707 1796 aaKnown RBP12.05□□□□□ -0.48
MTCL1-207ENST00000518815 PSMA5P28066 241 aa12.04□□□□□ -0.48
MTCL1-207ENST00000518815 RNF214Q8ND24 703 aa12.04□□□□□ -0.48
MTCL1-207ENST00000518815 EVI5LQ96CN4 794 aa12.04□□□□□ -0.48
MTCL1-207ENST00000518815 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
MTCL1-207ENST00000518815 CAVIN1Q6NZI2 390 aaKnown RBP12.04□□□□□ -0.48
MTCL1-207ENST00000518815 KIF6Q6ZMV9 814 aa12.04□□□□□ -0.48
MTCL1-207ENST00000518815 WDR17Q8IZU2 1322 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms