RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ATF7IPQ6VMQ6 1270 aa12.05□□□□□ -0.48
CLN8-203ENST00000518780 GIGYF2Q6Y7W6 1299 aaKnown RBP12.05□□□□□ -0.48
CLN8-203ENST00000518780 G2E3Q7L622 706 aa12.05□□□□□ -0.48
CLN8-203ENST00000518780 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
CLN8-203ENST00000518780 BCL2L13Q9BXK5 485 aa12.05□□□□□ -0.48
CLN8-203ENST00000518780 ANO8Q9HCE9 1232 aaPredicted RBP12.05□□□□□ -0.48
CLN8-203ENST00000518780 RREB1Q92766 1687 aa12.05□□□□□ -0.48
CLN8-203ENST00000518780 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
CLN8-203ENST00000518780 PI4KAP2A4QPH2 592 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 CAMTA2O94983 1202 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 NEXNQ0ZGT2 675 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 TRIM28Q13263 835 aaKnown RBP12.04□□□□□ -0.48
CLN8-203ENST00000518780 PDE3AQ14432 1141 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 PPP4R3CPQ6ZMV5 832 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 TTLL7Q6ZT98 887 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 NLGN1Q8N2Q7 840 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 PI4KAP1Q8N8J0 262 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 DNAAF4Q8WXU2 420 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 ARXQ96QS3 562 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 PNPLA7Q6ZV29 1317 aa12.04□□□□□ -0.48
CLN8-203ENST00000518780 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
CLN8-203ENST00000518780 IBTKQ9P2D0 1353 aaPredicted RBP12.04□□□□□ -0.48
CLN8-203ENST00000518780 PHF14O94880 888 aa12.03□□□□□ -0.48
CLN8-203ENST00000518780 COL23A1Q86Y22 540 aaPredicted RBP12.03□□□□□ -0.48
CLN8-203ENST00000518780 FRAT1Q92837 279 aaPredicted RBP12.03□□□□□ -0.48
CLN8-203ENST00000518780 METTL22Q9BUU2 404 aaPredicted RBP12.03□□□□□ -0.48
CLN8-203ENST00000518780 TBC1D2BQ9UPU7 963 aa12.03□□□□□ -0.48
CLN8-203ENST00000518780 RNF123Q5XPI4 1314 aa12.03□□□□□ -0.48
CLN8-203ENST00000518780 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
CLN8-203ENST00000518780 TCIRG1Q13488 830 aa12.02□□□□□ -0.49
CLN8-203ENST00000518780 PARP10Q53GL7 1025 aa12.02□□□□□ -0.49
CLN8-203ENST00000518780 LINS1Q8NG48 757 aa12.02□□□□□ -0.49
CLN8-203ENST00000518780 MAP3K2Q9Y2U5 619 aa12.02□□□□□ -0.49
CLN8-203ENST00000518780 TAF1LQ8IZX4 1826 aa12.02□□□□□ -0.49
CLN8-203ENST00000518780 ALDH1L1O75891 902 aa12.01□□□□□ -0.49
CLN8-203ENST00000518780 GYS1P13807 737 aa12.01□□□□□ -0.49
CLN8-203ENST00000518780 TRIM27P14373 513 aa12.01□□□□□ -0.49
CLN8-203ENST00000518780 RRP1P56182 461 aaKnown RBP12.01□□□□□ -0.49
CLN8-203ENST00000518780 USPL1Q5W0Q7 1092 aa12.01□□□□□ -0.49
CLN8-203ENST00000518780 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
CLN8-203ENST00000518780 FTSJ3Q8IY81 847 aaKnown RBP12.01□□□□□ -0.49
CLN8-203ENST00000518780 DZIP1LQ8IYY4 767 aaKnown RBP12.01□□□□□ -0.49
CLN8-203ENST00000518780 CHMP4BQ9H444 224 aaKnown RBP12.01□□□□□ -0.49
CLN8-203ENST00000518780 ZBTB3Q9H5J0 574 aa12.01□□□□□ -0.49
CLN8-203ENST00000518780 RTN4Q9NQC3 1192 aaKnown RBP12.01□□□□□ -0.49
CLN8-203ENST00000518780 ADCY9O60503 1353 aa12.01□□□□□ -0.49
CLN8-203ENST00000518780 CACNA1FO60840 1977 aa12□□□□□ -0.49
CLN8-203ENST00000518780 MYH14Q7Z406 1995 aaKnown RBP12□□□□□ -0.49
CLN8-203ENST00000518780 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
CLN8-203ENST00000518780 ZNF34Q8IZ26 560 aa12□□□□□ -0.49
CLN8-203ENST00000518780 CCDC191Q8NCU4 936 aa12□□□□□ -0.49
CLN8-203ENST00000518780 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
CLN8-203ENST00000518780 SRCIN1Q9C0H9 1055 aa12□□□□□ -0.49
CLN8-203ENST00000518780 HDAC5Q9UQL6 1122 aa12□□□□□ -0.49
CLN8-203ENST00000518780 ABCC4O15439 1325 aa12□□□□□ -0.49
CLN8-203ENST00000518780 ATP10DQ9P241 1426 aa12□□□□□ -0.49
CLN8-203ENST00000518780 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
CLN8-203ENST00000518780 HSP90B1P14625 803 aaKnown RBP11.99□□□□□ -0.49
CLN8-203ENST00000518780 HLFQ16534 295 aa11.99□□□□□ -0.49
CLN8-203ENST00000518780 BEND3Q5T5X7 828 aa11.99□□□□□ -0.49
CLN8-203ENST00000518780 SETDB2Q96T68 719 aa11.99□□□□□ -0.49
CLN8-203ENST00000518780 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
CLN8-203ENST00000518780 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
CLN8-203ENST00000518780 PXDNLA1KZ92 1463 aa11.99□□□□□ -0.49
CLN8-203ENST00000518780 F6X3S4 739 aa11.98□□□□□ -0.49
CLN8-203ENST00000518780 TM4SF1P30408 202 aa11.98□□□□□ -0.49
CLN8-203ENST00000518780 AAMPQ13685 434 aa11.98□□□□□ -0.49
CLN8-203ENST00000518780 R3HDM1Q15032 1099 aaKnown RBP11.98□□□□□ -0.49
CLN8-203ENST00000518780 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
CLN8-203ENST00000518780 PPP1R42Q7Z4L9 355 aa11.98□□□□□ -0.49
CLN8-203ENST00000518780 MYD88Q99836 296 aa11.98□□□□□ -0.49
CLN8-203ENST00000518780 NYXQ9GZU5 481 aa11.98□□□□□ -0.49
CLN8-203ENST00000518780 MTFR1LQ9H019 292 aa11.98□□□□□ -0.49
CLN8-203ENST00000518780 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
CLN8-203ENST00000518780 NIP7Q9Y221 180 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLN8-203ENST00000518780 NEURL1BA8MQ27 555 aa11.97□□□□□ -0.49
CLN8-203ENST00000518780 FKBP8Q14318 412 aa11.97□□□□□ -0.49
CLN8-203ENST00000518780 TPTE2Q6XPS3 522 aa11.97□□□□□ -0.49
CLN8-203ENST00000518780 SMIM5Q71RC9 77 aa11.97□□□□□ -0.49
CLN8-203ENST00000518780 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
CLN8-203ENST00000518780 CWC25Q9NXE8 425 aaPredicted RBP11.97□□□□□ -0.49
CLN8-203ENST00000518780 UBR3Q6ZT12 1888 aa11.97□□□□□ -0.49
CLN8-203ENST00000518780 IGKV5-2P06315 115 aa11.96□□□□□ -0.49
CLN8-203ENST00000518780 GCKRQ14397 625 aa11.96□□□□□ -0.49
CLN8-203ENST00000518780 NFIXQ14938 502 aa11.96□□□□□ -0.49
CLN8-203ENST00000518780 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
CLN8-203ENST00000518780 CLUAP1Q96AJ1 413 aa11.96□□□□□ -0.49
CLN8-203ENST00000518780 DDX19BQ9UMR2 479 aa11.96□□□□□ -0.49
CLN8-203ENST00000518780 QSER1Q2KHR3 1735 aa11.96□□□□□ -0.49
CLN8-203ENST00000518780 CARMIL3Q8ND23 1372 aa11.95□□□□□ -0.5
CLN8-203ENST00000518780 ATP5J2-PTCD1G3V325 749 aa11.95□□□□□ -0.5
CLN8-203ENST00000518780 PLIN1O60240 522 aa11.95□□□□□ -0.5
CLN8-203ENST00000518780 PCCAP05165 728 aaPredicted RBP11.95□□□□□ -0.5
CLN8-203ENST00000518780 MVPQ14764 893 aaKnown RBP11.95□□□□□ -0.5
CLN8-203ENST00000518780 ZBTB38Q8NAP3 1195 aaPredicted RBP11.95□□□□□ -0.5
CLN8-203ENST00000518780 UTP14AQ9BVJ6 771 aaKnown RBP11.95□□□□□ -0.5
CLN8-203ENST00000518780 PARP3Q9Y6F1 533 aa11.95□□□□□ -0.5
CLN8-203ENST00000518780 UTYO14607 1347 aa11.94□□□□□ -0.5
CLN8-203ENST00000518780 H7C1W4 665 aa11.94□□□□□ -0.5
CLN8-203ENST00000518780 GNAI3P08754 354 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms