RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 SSH1Q8WYL5 1049 aa29.34■■■□□ 2.29
NKX6-3-201ENST00000518699 USPL1Q5W0Q7 1092 aa29.33■■■□□ 2.29
NKX6-3-201ENST00000518699 PHAXQ9H814 394 aaKnown RBP29.33■■■□□ 2.29
NKX6-3-201ENST00000518699 ERVV-1B6SEH8 477 aa29.32■■■□□ 2.28
NKX6-3-201ENST00000518699 MTFR1LQ9H019 292 aa29.32■■■□□ 2.28
NKX6-3-201ENST00000518699 BCL2L12Q9HB09 334 aa29.32■■■□□ 2.28
NKX6-3-201ENST00000518699 RARSP54136 660 aaKnown RBP29.31■■■□□ 2.28
NKX6-3-201ENST00000518699 G2E3Q7L622 706 aa29.3■■■□□ 2.28
NKX6-3-201ENST00000518699 MRPL50Q8N5N7 158 aaKnown RBP29.3■■■□□ 2.28
NKX6-3-201ENST00000518699 ARXQ96QS3 562 aa29.3■■■□□ 2.28
NKX6-3-201ENST00000518699 ATP10DQ9P241 1426 aa29.3■■■□□ 2.28
NKX6-3-201ENST00000518699 BRPF1P55201 1214 aaPredicted RBP29.29■■■□□ 2.28
NKX6-3-201ENST00000518699 AIMP1Q12904 312 aaKnown RBP29.29■■■□□ 2.28
NKX6-3-201ENST00000518699 FLIIQ13045 1269 aa29.29■■■□□ 2.28
NKX6-3-201ENST00000518699 CLEC4GQ6UXB4 293 aa29.29■■■□□ 2.28
NKX6-3-201ENST00000518699 SMC4Q9NTJ3 1288 aa29.29■■■□□ 2.28
NKX6-3-201ENST00000518699 ZNF652Q9Y2D9 606 aa29.29■■■□□ 2.28
NKX6-3-201ENST00000518699 PLBD2Q8NHP8 589 aa29.28■■■□□ 2.28
NKX6-3-201ENST00000518699 ZBTB3Q9H5J0 574 aa29.28■■■□□ 2.28
NKX6-3-201ENST00000518699 ZBTB7AO95365 584 aa29.27■■■□□ 2.28
NKX6-3-201ENST00000518699 NLGN1Q8N2Q7 840 aa29.27■■■□□ 2.28
NKX6-3-201ENST00000518699 BCL2L13Q9BXK5 485 aa29.27■■■□□ 2.28
NKX6-3-201ENST00000518699 LRP5O75197 1615 aa29.27■■■□□ 2.28
NKX6-3-201ENST00000518699 DDX58O95786 925 aaKnown RBP29.26■■■□□ 2.28
NKX6-3-201ENST00000518699 FKBP8Q14318 412 aa29.26■■■□□ 2.28
NKX6-3-201ENST00000518699 ANKRD13DQ6ZTN6 518 aa29.26■■■□□ 2.28
NKX6-3-201ENST00000518699 ADCY9O60503 1353 aa29.26■■■□□ 2.27
NKX6-3-201ENST00000518699 GIGYF2Q6Y7W6 1299 aaKnown RBP29.26■■■□□ 2.27
NKX6-3-201ENST00000518699 NRXN2Q9P2S2 1712 aa29.25■■■□□ 2.27
NKX6-3-201ENST00000518699 N4BP2Q86UW6 1770 aaPredicted RBP29.25■■■□□ 2.27
NKX6-3-201ENST00000518699 HLFQ16534 295 aa29.25■■■□□ 2.27
NKX6-3-201ENST00000518699 MSL1Q68DK7 614 aa29.25■■■□□ 2.27
NKX6-3-201ENST00000518699 PTPRCP08575 1304 aa29.23■■■□□ 2.27
NKX6-3-201ENST00000518699 KIF16BQ96L93 1317 aa29.23■■■□□ 2.27
NKX6-3-201ENST00000518699 FKBP5Q13451 457 aaPredicted RBP29.23■■■□□ 2.27
NKX6-3-201ENST00000518699 AFDNP55196 1824 aaKnown RBP29.22■■■□□ 2.27
NKX6-3-201ENST00000518699 KSR2Q6VAB6 950 aa29.22■■■□□ 2.27
NKX6-3-201ENST00000518699 SGIP1Q9BQI5 828 aa29.22■■■□□ 2.27
NKX6-3-201ENST00000518699 HSP90AB3PQ58FF7 597 aa29.21■■■□□ 2.27
NKX6-3-201ENST00000518699 TBC1D9BQ66K14 1250 aa29.21■■■□□ 2.27
NKX6-3-201ENST00000518699 PXDNLA1KZ92 1463 aa29.2■■■□□ 2.27
NKX6-3-201ENST00000518699 CARMIL3Q8ND23 1372 aa29.2■■■□□ 2.26
NKX6-3-201ENST00000518699 PI4KAP2A4QPH2 592 aa29.2■■■□□ 2.26
NKX6-3-201ENST00000518699 TM4SF1P30408 202 aa29.2■■■□□ 2.26
NKX6-3-201ENST00000518699 NFIXQ14938 502 aa29.2■■■□□ 2.26
NKX6-3-201ENST00000518699 RIC3Q7Z5B4 369 aa29.2■■■□□ 2.26
NKX6-3-201ENST00000518699 PI4KAP1Q8N8J0 262 aa29.2■■■□□ 2.26
NKX6-3-201ENST00000518699 SPON1Q9HCB6 807 aa29.2■■■□□ 2.26
NKX6-3-201ENST00000518699 ATF5Q9Y2D1 282 aaPredicted RBP29.19■■■□□ 2.26
NKX6-3-201ENST00000518699 BCAR3O75815 825 aa29.18■■■□□ 2.26
NKX6-3-201ENST00000518699 MMP10P09238 476 aa29.18■■■□□ 2.26
NKX6-3-201ENST00000518699 PTGER2P43116 358 aa29.18■■■□□ 2.26
NKX6-3-201ENST00000518699 RCAN3Q9UKA8 241 aa29.18■■■□□ 2.26
NKX6-3-201ENST00000518699 MAP3K2Q9Y2U5 619 aa29.18■■■□□ 2.26
NKX6-3-201ENST00000518699 IBTKQ9P2D0 1353 aaPredicted RBP29.17■■■□□ 2.26
NKX6-3-201ENST00000518699 DDR1Q08345 913 aa29.17■■■□□ 2.26
NKX6-3-201ENST00000518699 TCIRG1Q13488 830 aa29.17■■■□□ 2.26
NKX6-3-201ENST00000518699 ZNF34Q8IZ26 560 aa29.17■■■□□ 2.26
NKX6-3-201ENST00000518699 POLD1P28340 1107 aa29.16■■■□□ 2.26
NKX6-3-201ENST00000518699 METTL22Q9BUU2 404 aaPredicted RBP29.16■■■□□ 2.26
NKX6-3-201ENST00000518699 NIP7Q9Y221 180 aaKnown RBP eCLIP29.16■■■□□ 2.26
NKX6-3-201ENST00000518699 POLRMTO00411 1230 aaKnown RBP29.15■■■□□ 2.26
NKX6-3-201ENST00000518699 DNAAF4Q8WXU2 420 aa29.15■■■□□ 2.26
NKX6-3-201ENST00000518699 KIF13BQ9NQT8 1826 aa29.15■■■□□ 2.26
NKX6-3-201ENST00000518699 UBN2Q6ZU65 1347 aa29.15■■■□□ 2.26
NKX6-3-201ENST00000518699 ARHGAP45Q92619 1136 aa29.14■■■□□ 2.26
NKX6-3-201ENST00000518699 SETDB2Q96T68 719 aa29.14■■■□□ 2.26
NKX6-3-201ENST00000518699 ISCA1Q9BUE6 129 aa29.14■■■□□ 2.26
NKX6-3-201ENST00000518699 NOB1Q9ULX3 412 aaKnown RBP29.14■■■□□ 2.26
NKX6-3-201ENST00000518699 BICDL1Q6ZP65 573 aa29.13■■■□□ 2.25
NKX6-3-201ENST00000518699 PARP10Q53GL7 1025 aa29.13■■■□□ 2.25
NKX6-3-201ENST00000518699 PARP3Q9Y6F1 533 aa29.13■■■□□ 2.25
NKX6-3-201ENST00000518699 F6X3S4 739 aa29.12■■■□□ 2.25
NKX6-3-201ENST00000518699 GPTP24298 496 aa29.12■■■□□ 2.25
NKX6-3-201ENST00000518699 TRIM28Q13263 835 aaKnown RBP29.12■■■□□ 2.25
NKX6-3-201ENST00000518699 MYD88Q99836 296 aa29.12■■■□□ 2.25
NKX6-3-201ENST00000518699 NEXNQ0ZGT2 675 aa29.11■■■□□ 2.25
NKX6-3-201ENST00000518699 API5Q9BZZ5 524 aaKnown RBP29.11■■■□□ 2.25
NKX6-3-201ENST00000518699 LAMB2P55268 1798 aa29.1■■■□□ 2.25
NKX6-3-201ENST00000518699 IPO8O15397 1037 aaKnown RBP29.1■■■□□ 2.25
NKX6-3-201ENST00000518699 NLRP10Q86W26 655 aa29.1■■■□□ 2.25
NKX6-3-201ENST00000518699 C10orf71Q711Q0 1435 aa29.1■■■□□ 2.25
NKX6-3-201ENST00000518699 SERPINB2P05120 415 aa29.09■■■□□ 2.25
NKX6-3-201ENST00000518699 ANKRD31Q8N7Z5 1873 aa29.08■■■□□ 2.25
NKX6-3-201ENST00000518699 RNF123Q5XPI4 1314 aa29.08■■■□□ 2.25
NKX6-3-201ENST00000518699 IGKV5-2P06315 115 aa29.08■■■□□ 2.25
NKX6-3-201ENST00000518699 LINS1Q8NG48 757 aa29.08■■■□□ 2.25
NKX6-3-201ENST00000518699 ABCC4O15439 1325 aa29.07■■■□□ 2.24
NKX6-3-201ENST00000518699 ATP5J2-PTCD1G3V325 749 aa29.07■■■□□ 2.24
NKX6-3-201ENST00000518699 ZKSCAN2Q63HK3 967 aa29.07■■■□□ 2.24
NKX6-3-201ENST00000518699 ATF7IPQ6VMQ6 1270 aa29.07■■■□□ 2.24
NKX6-3-201ENST00000518699 CCDC191Q8NCU4 936 aa29.07■■■□□ 2.24
NKX6-3-201ENST00000518699 FRAT1Q92837 279 aaPredicted RBP29.07■■■□□ 2.24
NKX6-3-201ENST00000518699 NTSR2O95665 410 aa29.06■■■□□ 2.24
NKX6-3-201ENST00000518699 TRIM27P14373 513 aa29.06■■■□□ 2.24
NKX6-3-201ENST00000518699 BEND3Q5T5X7 828 aa29.06■■■□□ 2.24
NKX6-3-201ENST00000518699 PPP1R42Q7Z4L9 355 aa29.06■■■□□ 2.24
NKX6-3-201ENST00000518699 NBPF5PQ86XG9 351 aaPredicted RBP29.06■■■□□ 2.24
NKX6-3-201ENST00000518699 NYXQ9GZU5 481 aa29.06■■■□□ 2.24
NKX6-3-201ENST00000518699 RIC1Q4ADV7 1423 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms