RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 QTRT2Q9H974 415 aaKnown RBP22.45■■□□□ 1.18
SDC2-202ENST00000518385 DDX21Q9NR30 783 aaKnown RBP eCLIP22.45■■□□□ 1.18
SDC2-202ENST00000518385 PAPPAQ13219 1627 aa22.45■■□□□ 1.18
SDC2-202ENST00000518385 GOLGA6L22H0YM25 854 aa22.44■■□□□ 1.18
SDC2-202ENST00000518385 FBXO41Q8TF61 875 aa22.44■■□□□ 1.18
SDC2-202ENST00000518385 USP44Q9H0E7 712 aa22.44■■□□□ 1.18
SDC2-202ENST00000518385 BCL9O00512 1426 aa22.44■■□□□ 1.18
SDC2-202ENST00000518385 ALDH1L1O75891 902 aa22.43■■□□□ 1.18
SDC2-202ENST00000518385 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
SDC2-202ENST00000518385 UBTFL1P0CB47 393 aaPredicted RBP22.43■■□□□ 1.18
SDC2-202ENST00000518385 PRIM1P49642 420 aaKnown RBP22.43■■□□□ 1.18
SDC2-202ENST00000518385 THSD7AQ9UPZ6 1657 aa22.43■■□□□ 1.18
SDC2-202ENST00000518385 UBR2Q8IWV8 1755 aa22.43■■□□□ 1.18
SDC2-202ENST00000518385 BEND3Q5T5X7 828 aa22.42■■□□□ 1.18
SDC2-202ENST00000518385 KSR2Q6VAB6 950 aa22.42■■□□□ 1.18
SDC2-202ENST00000518385 PI4KAP2A4QPH2 592 aa22.42■■□□□ 1.18
SDC2-202ENST00000518385 GLIPR1L2Q4G1C9 344 aa22.42■■□□□ 1.18
SDC2-202ENST00000518385 PI4KAP1Q8N8J0 262 aa22.42■■□□□ 1.18
SDC2-202ENST00000518385 ATG3Q9NT62 314 aa22.42■■□□□ 1.18
SDC2-202ENST00000518385 ASAP1Q9ULH1 1129 aa22.42■■□□□ 1.18
SDC2-202ENST00000518385 KCPQ6ZWJ8 1503 aa22.41■■□□□ 1.18
SDC2-202ENST00000518385 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
SDC2-202ENST00000518385 A0A0G2JS52 829 aa22.4■■□□□ 1.18
SDC2-202ENST00000518385 PLEKHM2Q8IWE5 1019 aa22.4■■□□□ 1.18
SDC2-202ENST00000518385 C5P01031 1676 aa22.4■■□□□ 1.18
SDC2-202ENST00000518385 KAT6BQ8WYB5 2073 aa22.39■■□□□ 1.18
SDC2-202ENST00000518385 ADCY9O60503 1353 aa22.39■■□□□ 1.18
SDC2-202ENST00000518385 K7ELQ4 463 aaPredicted RBP22.39■■□□□ 1.18
SDC2-202ENST00000518385 DOT1LQ8TEK3 1739 aa22.39■■□□□ 1.17
SDC2-202ENST00000518385 PTCD1O75127 700 aaKnown RBP22.38■■□□□ 1.17
SDC2-202ENST00000518385 PDIA6Q15084 440 aa22.38■■□□□ 1.17
SDC2-202ENST00000518385 SYTL4Q96C24 671 aaPredicted RBP22.38■■□□□ 1.17
SDC2-202ENST00000518385 VSIG10Q8N0Z9 540 aa22.38■■□□□ 1.17
SDC2-202ENST00000518385 TNPO1Q92973 898 aaKnown RBP22.38■■□□□ 1.17
SDC2-202ENST00000518385 SSH3Q8TE77 659 aa22.37■■□□□ 1.17
SDC2-202ENST00000518385 ACSBG1Q96GR2 724 aa22.37■■□□□ 1.17
SDC2-202ENST00000518385 LRRFIP2Q9Y608 721 aaKnown RBP22.37■■□□□ 1.17
SDC2-202ENST00000518385 ERBB4Q15303 1308 aa22.36■■□□□ 1.17
SDC2-202ENST00000518385 CDC45O75419 566 aa22.36■■□□□ 1.17
SDC2-202ENST00000518385 PROSER3Q2NL68 480 aa22.36■■□□□ 1.17
SDC2-202ENST00000518385 ZNF772Q68DY9 489 aaPredicted RBP22.36■■□□□ 1.17
SDC2-202ENST00000518385 SEPT12Q8IYM1 358 aa22.36■■□□□ 1.17
SDC2-202ENST00000518385 TRIM44Q96DX7 344 aaPredicted RBP22.36■■□□□ 1.17
SDC2-202ENST00000518385 OSBPL3Q9H4L5 887 aa22.36■■□□□ 1.17
SDC2-202ENST00000518385 ESPNB1AK53 854 aa22.35■■□□□ 1.17
SDC2-202ENST00000518385 ANXA1P04083 346 aa22.35■■□□□ 1.17
SDC2-202ENST00000518385 CCDC173Q0VFZ6 552 aa22.35■■□□□ 1.17
SDC2-202ENST00000518385 LINS1Q8NG48 757 aa22.35■■□□□ 1.17
SDC2-202ENST00000518385 RAB11FIP3O75154 756 aa22.34■■□□□ 1.17
SDC2-202ENST00000518385 TTC22Q5TAA0 569 aa22.34■■□□□ 1.17
SDC2-202ENST00000518385 TEX13AQ9BXU3 409 aaPredicted RBP22.34■■□□□ 1.17
SDC2-202ENST00000518385 MAP3K2Q9Y2U5 619 aa22.34■■□□□ 1.17
SDC2-202ENST00000518385 RRP9O43818 475 aaKnown RBP22.33■■□□□ 1.17
SDC2-202ENST00000518385 POLA2Q14181 598 aa22.33■■□□□ 1.17
SDC2-202ENST00000518385 RABEP1Q15276 862 aa22.33■■□□□ 1.17
SDC2-202ENST00000518385 ANP32BQ92688 251 aaKnown RBP22.33■■□□□ 1.17
SDC2-202ENST00000518385 LRRCC1Q9C099 1032 aa22.33■■□□□ 1.17
SDC2-202ENST00000518385 LAMB4A4D0S4 1761 aa22.33■■□□□ 1.17
SDC2-202ENST00000518385 NUCB2P80303 420 aa22.33■■□□□ 1.16
SDC2-202ENST00000518385 RBM42Q9BTD8 480 aaKnown RBP22.33■■□□□ 1.16
SDC2-202ENST00000518385 HSP90AA1P07900 732 aaKnown RBP22.32■■□□□ 1.16
SDC2-202ENST00000518385 MTX1Q13505 466 aa22.32■■□□□ 1.16
SDC2-202ENST00000518385 HSP90AB4PQ58FF6 505 aa22.32■■□□□ 1.16
SDC2-202ENST00000518385 GZF1Q9H116 711 aaPredicted RBP22.32■■□□□ 1.16
SDC2-202ENST00000518385 UTYO14607 1347 aa22.32■■□□□ 1.16
SDC2-202ENST00000518385 PNMA6EA0A0J9YXQ4 647 aa22.31■■□□□ 1.16
SDC2-202ENST00000518385 KCNQ2O43526 872 aa22.31■■□□□ 1.16
SDC2-202ENST00000518385 TPM2P07951 284 aa22.31■■□□□ 1.16
SDC2-202ENST00000518385 KLHL40Q2TBA0 621 aa22.31■■□□□ 1.16
SDC2-202ENST00000518385 LRP10Q7Z4F1 713 aa22.31■■□□□ 1.16
SDC2-202ENST00000518385 SPRYD3Q8NCJ5 442 aa22.31■■□□□ 1.16
SDC2-202ENST00000518385 PPP1R9BQ96SB3 815 aa22.31■■□□□ 1.16
SDC2-202ENST00000518385 KIF2CQ99661 725 aa22.31■■□□□ 1.16
SDC2-202ENST00000518385 HS1BP3Q53T59 392 aa22.3■■□□□ 1.16
SDC2-202ENST00000518385 CWC22Q9HCG8 908 aaKnown RBP22.3■■□□□ 1.16
SDC2-202ENST00000518385 MYL6BP14649 208 aa22.29■■□□□ 1.16
SDC2-202ENST00000518385 NEXNQ0ZGT2 675 aa22.29■■□□□ 1.16
SDC2-202ENST00000518385 PANK2Q9BZ23 570 aa22.29■■□□□ 1.16
SDC2-202ENST00000518385 C9orf78Q9NZ63 289 aaPredicted RBP22.29■■□□□ 1.16
SDC2-202ENST00000518385 RBM6P78332 1123 aaKnown RBP22.29■■□□□ 1.16
SDC2-202ENST00000518385 TBC1D9Q6ZT07 1266 aa22.29■■□□□ 1.16
SDC2-202ENST00000518385 PPP1R42Q7Z4L9 355 aa22.29■■□□□ 1.16
SDC2-202ENST00000518385 DNAJC10Q8IXB1 793 aa22.29■■□□□ 1.16
SDC2-202ENST00000518385 SMARCC1Q92922 1105 aaPredicted RBP22.29■■□□□ 1.16
SDC2-202ENST00000518385 NAP1L5Q96NT1 182 aaPredicted RBP22.29■■□□□ 1.16
SDC2-202ENST00000518385 SLC4A9Q96Q91 983 aa22.29■■□□□ 1.16
SDC2-202ENST00000518385 NBPF26B4DH59 902 aa22.28■■□□□ 1.16
SDC2-202ENST00000518385 A1BGP04217 495 aa22.28■■□□□ 1.16
SDC2-202ENST00000518385 NBPF7P0C2Y1 421 aaPredicted RBP22.28■■□□□ 1.16
SDC2-202ENST00000518385 TERF1P54274 439 aa22.28■■□□□ 1.16
SDC2-202ENST00000518385 NBPF14Q5TI25 921 aa22.28■■□□□ 1.16
SDC2-202ENST00000518385 NBPF10Q6P3W6 841 aaKnown RBP22.28■■□□□ 1.16
SDC2-202ENST00000518385 RIC3Q7Z5B4 369 aa22.28■■□□□ 1.16
SDC2-202ENST00000518385 C16orf71Q8IYS4 520 aaPredicted RBP22.28■■□□□ 1.16
SDC2-202ENST00000518385 NBPF15Q8N660 670 aa22.28■■□□□ 1.16
SDC2-202ENST00000518385 AOX1Q06278 1338 aa22.27■■□□□ 1.16
SDC2-202ENST00000518385 STARD3NLO95772 234 aa22.27■■□□□ 1.16
SDC2-202ENST00000518385 GSPT1P15170 499 aaKnown RBP22.27■■□□□ 1.16
SDC2-202ENST00000518385 CASC1Q6TDU7 716 aa22.27■■□□□ 1.16
SDC2-202ENST00000518385 EXOC6BQ9Y2D4 811 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms