RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 NOP58Q9Y2X3 529 aaKnown RBP12□□□□□ -0.49
EFCAB13-203ENST00000517484 SPATA31A1Q5TZJ5 1347 aa12□□□□□ -0.49
EFCAB13-203ENST00000517484 NCOA3Q9Y6Q9 1424 aa12□□□□□ -0.49
EFCAB13-203ENST00000517484 COL5A2P05997 1499 aaPredicted RBP11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 GCKRQ14397 625 aa11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 IPO9Q96P70 1041 aaKnown RBP11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 METTL22Q9BUU2 404 aaPredicted RBP11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 CPDO75976 1380 aa11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 NRKQ7Z2Y5 1582 aa11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 RHPN1Q8TCX5 695 aa11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 EDC3Q96F86 508 aaKnown RBP11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 CWC25Q9NXE8 425 aaPredicted RBP11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 STRCQ7RTU9 1775 aa11.99□□□□□ -0.49
EFCAB13-203ENST00000517484 SNAP23O00161 211 aa11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 GNPATO15228 680 aa11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 TIMM10P62072 90 aa11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 IQSEC3Q9UPP2 1182 aaPredicted RBP11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 ADCY9O60503 1353 aa11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 LARP6Q9BRS8 491 aaKnown RBP11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 C22orf23Q9BZE7 217 aa11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 NIP7Q9Y221 180 aaKnown RBP eCLIP11.98□□□□□ -0.49
EFCAB13-203ENST00000517484 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 SDSP20132 328 aa11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 MX1P20591 662 aa11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 CCDC57Q2TAC2 916 aa11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 HEG1Q9ULI3 1381 aa11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 CRKLP46109 303 aaKnown RBP11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 CASC1Q6TDU7 716 aa11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 CWC27Q6UX04 472 aaKnown RBP11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 CNNM1Q9NRU3 951 aa11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 BABAM1Q9NWV8 329 aa11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 CCNL1Q9UK58 526 aaPredicted RBP11.97□□□□□ -0.49
EFCAB13-203ENST00000517484 AAMPQ13685 434 aa11.96□□□□□ -0.49
EFCAB13-203ENST00000517484 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
EFCAB13-203ENST00000517484 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
EFCAB13-203ENST00000517484 SRP68Q9UHB9 627 aaKnown RBP11.96□□□□□ -0.49
EFCAB13-203ENST00000517484 BRPF1P55201 1214 aaPredicted RBP11.96□□□□□ -0.49
EFCAB13-203ENST00000517484 TBC1D9Q6ZT07 1266 aa11.96□□□□□ -0.49
EFCAB13-203ENST00000517484 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
EFCAB13-203ENST00000517484 GJD4Q96KN9 370 aaPredicted RBP11.96□□□□□ -0.5
EFCAB13-203ENST00000517484 PUS3Q9BZE2 481 aaKnown RBP11.96□□□□□ -0.5
EFCAB13-203ENST00000517484 HOXB7P09629 217 aa11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 PDE1AP54750 535 aa11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 FKBP4Q02790 459 aaKnown RBP eCLIP11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 ITPK1Q13572 414 aa11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 STK11IPQ8N1F8 1099 aa11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 SPATA31A5Q5VU36 1347 aa11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 SPATA31A7Q8IWB4 1347 aa11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 GSPT1P15170 499 aaKnown RBP11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 TFCP2Q12800 502 aa11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 ZNF219Q9P2Y4 722 aaPredicted RBP11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 ANKRD26Q9UPS8 1709 aa11.95□□□□□ -0.5
EFCAB13-203ENST00000517484 FOXD4L6Q3SYB3 417 aaPredicted RBP11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 FOXD4L3Q6VB84 417 aaPredicted RBP11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 NAP1L2Q9ULW6 460 aaPredicted RBP11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 NWD1Q149M9 1564 aa11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 FRAT2O75474 233 aaPredicted RBP11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 LRRC24Q50LG9 513 aa11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 KIF1BPQ96EK5 621 aa11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 RGPD2P0DJD1 1756 aa11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 JCADQ9P266 1359 aa11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 LTN1O94822 1766 aa11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 JAG2Q9Y219 1238 aa11.94□□□□□ -0.5
EFCAB13-203ENST00000517484 UTRNP46939 3433 aa11.93□□□□□ -0.5
EFCAB13-203ENST00000517484 ZPR1O75312 459 aa11.93□□□□□ -0.5
EFCAB13-203ENST00000517484 LDHAL6AQ6ZMR3 332 aa11.93□□□□□ -0.5
EFCAB13-203ENST00000517484 ALDH1L1O75891 902 aa11.93□□□□□ -0.5
EFCAB13-203ENST00000517484 DIAPH3Q9NSV4 1193 aa11.93□□□□□ -0.5
EFCAB13-203ENST00000517484 PPP1R1BQ9UD71 204 aaPredicted RBP11.93□□□□□ -0.5
EFCAB13-203ENST00000517484 IRS4O14654 1257 aaPredicted RBP11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 CDC45O75419 566 aa11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 CYP19A1P11511 503 aaPredicted RBP11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 SLFNL1Q499Z3 407 aa11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 FSD1Q9BTV5 496 aa11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 CCDC87Q9NVE4 849 aa11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 OVOS2A0A0G2JMS6 1433 aa11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 TAF5LO75529 589 aa11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 CHGBP05060 677 aa11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 DDX46Q7L014 1031 aaKnown RBP11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 IFIT5Q13325 482 aaKnown RBP11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 TRPC5Q9UL62 973 aaPredicted RBP11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 HDAC5Q9UQL6 1122 aa11.92□□□□□ -0.5
EFCAB13-203ENST00000517484 TCIRG1Q13488 830 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 METTL24Q5JXM2 366 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 TTC22Q5TAA0 569 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 MSL1Q68DK7 614 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 EAF2Q96CJ1 260 aaPredicted RBP11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 AK7Q96M32 723 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 TEX13AQ9BXU3 409 aaPredicted RBP11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 RFC4P35249 363 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 USPL1Q5W0Q7 1092 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms