RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 MTMR2Q13614 643 aa2.2□□□□□ -2.06
RNU6-539P-201ENST00000516665 FBXO11Q86XK2 927 aa2.2□□□□□ -2.06
RNU6-539P-201ENST00000516665 ARMC2Q8NEN0 867 aa2.2□□□□□ -2.06
RNU6-539P-201ENST00000516665 TNFRSF25Q93038 417 aa2.2□□□□□ -2.06
RNU6-539P-201ENST00000516665 CFAP99D6REC4 459 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 PER1O15534 1290 aaPredicted RBP2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 KRT1P04264 644 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 C1QTNF9P0C862 333 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 CLN3Q13286 438 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 NFIXQ14938 502 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 IGF2-ASQ6U949 168 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 SLC16A11Q8NCK7 471 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 FLCNQ8NFG4 579 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 JPH1Q9HDC5 661 aaPredicted RBP2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 PARD6AQ9NPB6 346 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 TNFRSF18Q9Y5U5 241 aa2.19□□□□□ -2.06
RNU6-539P-201ENST00000516665 SOCS7O14512 581 aa2.18□□□□□ -2.06
RNU6-539P-201ENST00000516665 AFF1P51825 1210 aaKnown RBP2.18□□□□□ -2.06
RNU6-539P-201ENST00000516665 HMGA2P52926 109 aa2.18□□□□□ -2.06
RNU6-539P-201ENST00000516665 C4orf17Q53FE4 359 aa2.18□□□□□ -2.06
RNU6-539P-201ENST00000516665 AGBL5Q8NDL9 886 aa2.18□□□□□ -2.06
RNU6-539P-201ENST00000516665 SORCS2Q96PQ0 1159 aa2.18□□□□□ -2.06
RNU6-539P-201ENST00000516665 PPP1R16BQ96T49 567 aa2.18□□□□□ -2.06
RNU6-539P-201ENST00000516665 PIM2Q9P1W9 311 aa2.18□□□□□ -2.06
RNU6-539P-201ENST00000516665 SRRDQ9UH36 339 aa2.18□□□□□ -2.06
RNU6-539P-201ENST00000516665 NPIPB6E9PJ23 425 aa2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 F8W735 103 aaPredicted RBP2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 DHX15O43143 795 aaKnown RBP2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 GLB1P16278 677 aa2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 NDUFV2P19404 249 aa2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 ZXDAP98168 799 aa2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 MLANAQ16655 118 aa2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 ZNF792Q3KQV3 632 aa2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 NUTM1Q86Y26 1132 aa2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 ARMC10Q8N2F6 343 aa2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 NUDT8Q8WV74 236 aa2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 UBL7Q96S82 380 aaPredicted RBP2.17□□□□□ -2.06
RNU6-539P-201ENST00000516665 WDR64B1ANS9 1081 aa2.16□□□□□ -2.06
RNU6-539P-201ENST00000516665 Q6ZS46 218 aa2.16□□□□□ -2.06
RNU6-539P-201ENST00000516665 SYDE1Q6ZW31 735 aaPredicted RBP2.16□□□□□ -2.06
RNU6-539P-201ENST00000516665 AGGF1Q8N302 714 aaeCLIP2.16□□□□□ -2.06
RNU6-539P-201ENST00000516665 NTN5Q8WTR8 489 aaPredicted RBP2.16□□□□□ -2.06
RNU6-539P-201ENST00000516665 ARHGAP9Q9BRR9 750 aa2.16□□□□□ -2.06
RNU6-539P-201ENST00000516665 ARHGEF10LQ9HCE6 1279 aa2.16□□□□□ -2.06
RNU6-539P-201ENST00000516665 MARK1Q9P0L2 795 aa2.16□□□□□ -2.06
RNU6-539P-201ENST00000516665 CNTNAP4Q9C0A0 1308 aa2.16□□□□□ -2.06
RNU6-539P-201ENST00000516665 SPDYE5A6NIY4 337 aa2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 GNPATO15228 680 aa2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 KRTAP10-6P60371 365 aaPredicted RBP2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 ATG4DQ86TL0 474 aaPredicted RBP2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 NLRP8Q86W28 1048 aa2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 GLIS3Q8NEA6 775 aa2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 CXorf38Q8TB03 319 aa2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 SLC4A9Q96Q91 983 aa2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 ZCCHC4Q9H5U6 513 aa2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 SLITRK6Q9H5Y7 841 aa2.15□□□□□ -2.07
RNU6-539P-201ENST00000516665 FSHBP01225 129 aa2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 CELA3BP08861 270 aa2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 FAM157BP0CG42 384 aa2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 ATP4AP20648 1035 aa2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 ATXN1P54253 815 aaKnown RBP2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 NBPF20Q3BBV1 942 aa2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 MSL1Q68DK7 614 aa2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 DTWD1Q8N5C7 304 aa2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 RAB6BQ9NRW1 208 aa2.14□□□□□ -2.07
RNU6-539P-201ENST00000516665 KRTAP29-1A8MX34 341 aaPredicted RBP2.13□□□□□ -2.07
RNU6-539P-201ENST00000516665 DEAF1O75398 565 aaPredicted RBP2.13□□□□□ -2.07
RNU6-539P-201ENST00000516665 FOSL1P15407 271 aa2.13□□□□□ -2.07
RNU6-539P-201ENST00000516665 PLCL1Q15111 1095 aa2.13□□□□□ -2.07
RNU6-539P-201ENST00000516665 GNASQ5JWF2 1037 aa2.13□□□□□ -2.07
RNU6-539P-201ENST00000516665 RAB44Q7Z6P3 723 aaPredicted RBP2.13□□□□□ -2.07
RNU6-539P-201ENST00000516665 SLC30A3Q99726 388 aa2.13□□□□□ -2.07
RNU6-539P-201ENST00000516665 RTEL1Q9NZ71 1219 aa2.13□□□□□ -2.07
RNU6-539P-201ENST00000516665 MOXD2PA6NHM9 499 aa2.12□□□□□ -2.07
RNU6-539P-201ENST00000516665 DLL1O00548 723 aa2.12□□□□□ -2.07
RNU6-539P-201ENST00000516665 EFSO43281 561 aa2.12□□□□□ -2.07
RNU6-539P-201ENST00000516665 BMP7P18075 431 aa2.12□□□□□ -2.07
RNU6-539P-201ENST00000516665 CENPCQ03188 943 aa2.12□□□□□ -2.07
RNU6-539P-201ENST00000516665 ZBTB33Q86T24 672 aa2.12□□□□□ -2.07
RNU6-539P-201ENST00000516665 TMEM130Q8N3G9 435 aa2.12□□□□□ -2.07
RNU6-539P-201ENST00000516665 SCAND2PQ9GZW5 306 aaPredicted RBP2.12□□□□□ -2.07
RNU6-539P-201ENST00000516665 MYRFQ9Y2G1 1151 aa2.12□□□□□ -2.07
RNU6-539P-201ENST00000516665 A0A1W2PNR3 127 aa2.11□□□□□ -2.07
RNU6-539P-201ENST00000516665 ZNF503-AS2A6NEH8 195 aa2.11□□□□□ -2.07
RNU6-539P-201ENST00000516665 TNFRSF1AP19438 455 aa2.11□□□□□ -2.07
RNU6-539P-201ENST00000516665 CIAPIN1Q6FI81 312 aa2.11□□□□□ -2.07
RNU6-539P-201ENST00000516665 GPKOWQ92917 476 aaPredicted RBP eCLIP2.11□□□□□ -2.07
RNU6-539P-201ENST00000516665 OCSTAMPQ9BR26 566 aa2.11□□□□□ -2.07
RNU6-539P-201ENST00000516665 MRPL18Q9H0U6 180 aaKnown RBP2.11□□□□□ -2.07
RNU6-539P-201ENST00000516665 BSDC1Q9NW68 430 aaPredicted RBP2.11□□□□□ -2.07
RNU6-539P-201ENST00000516665 LEMD3Q9Y2U8 911 aa2.11□□□□□ -2.07
RNU6-539P-201ENST00000516665 NFIBO00712 420 aa2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 GRIN3BO60391 1043 aa2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 IL2RAP01589 272 aa2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 MDM2Q00987 491 aaPredicted RBP2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 KCNA10Q16322 511 aa2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 TMEM214Q6NUQ4 689 aaKnown RBP2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 ZNF574Q6ZN55 896 aaPredicted RBP2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 UTP4Q969X6 686 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms