RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 CHRNA4P43681 627 aa10.74□□□□□ -0.69
RN7SKP253-201ENST00000516424 TRIM50Q86XT4 487 aa10.74□□□□□ -0.69
RN7SKP253-201ENST00000516424 UCN2Q96RP3 112 aa10.74□□□□□ -0.69
RN7SKP253-201ENST00000516424 SERTM1A2A2V5 107 aa10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 USP17L3A6NCW0 530 aa10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 USP17L4A6NCW7 530 aa10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 CLDN10P78369 228 aa10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 USP17L2Q6R6M4 530 aa10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 USP17L1Q7RTZ2 530 aa10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 SYT9Q86SS6 491 aa10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 PLEKHM2Q8IWE5 1019 aa10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 TRIM11Q96F44 468 aa10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 ZCCHC6Q5VYS8 1495 aaKnown RBP10.73□□□□□ -0.69
RN7SKP253-201ENST00000516424 UBTFP17480 764 aaKnown RBP10.72□□□□□ -0.69
RN7SKP253-201ENST00000516424 ELOA3CA0A087WX78 387 aaPredicted RBP10.71□□□□□ -0.69
RN7SKP253-201ENST00000516424 ELOA3DA6NLF2 546 aaPredicted RBP10.71□□□□□ -0.69
RN7SKP253-201ENST00000516424 ELOA3BQ3SY89 546 aa10.71□□□□□ -0.69
RN7SKP253-201ENST00000516424 HDGFL1Q5TGJ6 251 aa10.71□□□□□ -0.69
RN7SKP253-201ENST00000516424 CCDC102BQ68D86 513 aa10.71□□□□□ -0.69
RN7SKP253-201ENST00000516424 ELOA3Q8NG57 546 aa10.71□□□□□ -0.69
RN7SKP253-201ENST00000516424 MDFIQ99750 246 aa10.71□□□□□ -0.69
RN7SKP253-201ENST00000516424 TSPAN10Q9H1Z9 355 aaPredicted RBP10.71□□□□□ -0.69
RN7SKP253-201ENST00000516424 NEUROD4Q9HD90 331 aa10.71□□□□□ -0.69
RN7SKP253-201ENST00000516424 ATP1A2P50993 1020 aa10.7□□□□□ -0.7
RN7SKP253-201ENST00000516424 SFSWAPQ12872 951 aaKnown RBP10.7□□□□□ -0.7
RN7SKP253-201ENST00000516424 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
RN7SKP253-201ENST00000516424 PLVAPQ9BX97 442 aa10.7□□□□□ -0.7
RN7SKP253-201ENST00000516424 GPC6Q9Y625 555 aaPredicted RBP10.7□□□□□ -0.7
RN7SKP253-201ENST00000516424 XP32Q5T750 250 aa10.69□□□□□ -0.7
RN7SKP253-201ENST00000516424 SLC30A3Q99726 388 aa10.69□□□□□ -0.7
RN7SKP253-201ENST00000516424 ATP9BO43861 1147 aa10.68□□□□□ -0.7
RN7SKP253-201ENST00000516424 PSMA6P60900 246 aaKnown RBP10.68□□□□□ -0.7
RN7SKP253-201ENST00000516424 FLIIQ13045 1269 aa10.68□□□□□ -0.7
RN7SKP253-201ENST00000516424 OGFOD1Q8N543 542 aa10.68□□□□□ -0.7
RN7SKP253-201ENST00000516424 SIN3BO75182 1162 aa10.67□□□□□ -0.7
RN7SKP253-201ENST00000516424 ALAS2P22557 587 aa10.67□□□□□ -0.7
RN7SKP253-201ENST00000516424 HSH2DQ96JZ2 352 aa10.67□□□□□ -0.7
RN7SKP253-201ENST00000516424 HCN4Q9Y3Q4 1203 aa10.67□□□□□ -0.7
RN7SKP253-201ENST00000516424 HIRAP54198 1017 aaPredicted RBP10.66□□□□□ -0.7
RN7SKP253-201ENST00000516424 RAB44Q7Z6P3 723 aaPredicted RBP10.66□□□□□ -0.7
RN7SKP253-201ENST00000516424 LARGE2Q8N3Y3 721 aa10.66□□□□□ -0.7
RN7SKP253-201ENST00000516424 TSEN2Q8NCE0 465 aaKnown RBP10.66□□□□□ -0.7
RN7SKP253-201ENST00000516424 ZNF594Q96JF6 807 aaPredicted RBP10.66□□□□□ -0.7
RN7SKP253-201ENST00000516424 PHACTR1Q9C0D0 580 aa10.66□□□□□ -0.7
RN7SKP253-201ENST00000516424 MKRN1Q9UHC7 482 aaKnown RBP10.66□□□□□ -0.7
RN7SKP253-201ENST00000516424 SPEM2Q0P670 501 aa10.65□□□□□ -0.7
RN7SKP253-201ENST00000516424 C1orf53Q5VUE5 145 aa10.65□□□□□ -0.7
RN7SKP253-201ENST00000516424 POTEAQ6S8J7 498 aa10.65□□□□□ -0.7
RN7SKP253-201ENST00000516424 PALM3A6NDB9 673 aaPredicted RBP10.64□□□□□ -0.71
RN7SKP253-201ENST00000516424 ADARB2-AS1A8MUL3 147 aa10.64□□□□□ -0.71
RN7SKP253-201ENST00000516424 M0R2N6 131 aa10.64□□□□□ -0.71
RN7SKP253-201ENST00000516424 SPATA31C1P0DKV0 1188 aa10.64□□□□□ -0.71
RN7SKP253-201ENST00000516424 ZNF280CQ8ND82 737 aa10.64□□□□□ -0.71
RN7SKP253-201ENST00000516424 BRD7Q9NPI1 651 aa10.64□□□□□ -0.71
RN7SKP253-201ENST00000516424 CHMP3Q9Y3E7 222 aa10.64□□□□□ -0.71
RN7SKP253-201ENST00000516424 SFI1A8K8P3 1242 aa10.63□□□□□ -0.71
RN7SKP253-201ENST00000516424 M0R082 166 aa10.63□□□□□ -0.71
RN7SKP253-201ENST00000516424 SIX5Q8N196 739 aa10.63□□□□□ -0.71
RN7SKP253-201ENST00000516424 ZNF417Q8TAU3 575 aa10.63□□□□□ -0.71
RN7SKP253-201ENST00000516424 TNFRSF25Q93038 417 aa10.63□□□□□ -0.71
RN7SKP253-201ENST00000516424 CEP63Q96MT8 703 aa10.63□□□□□ -0.71
RN7SKP253-201ENST00000516424 ZNF587Q96SQ5 575 aaPredicted RBP10.63□□□□□ -0.71
RN7SKP253-201ENST00000516424 STARD13Q9Y3M8 1113 aa10.63□□□□□ -0.71
RN7SKP253-201ENST00000516424 C21orf2O43822 256 aa10.62□□□□□ -0.71
RN7SKP253-201ENST00000516424 DKK1O94907 266 aa10.62□□□□□ -0.71
RN7SKP253-201ENST00000516424 DOC2BQ14184 412 aa10.62□□□□□ -0.71
RN7SKP253-201ENST00000516424 PPP1R12BO60237 982 aaPredicted RBP10.61□□□□□ -0.71
RN7SKP253-201ENST00000516424 TYRO3Q06418 890 aa10.61□□□□□ -0.71
RN7SKP253-201ENST00000516424 COL9A3Q14050 684 aaPredicted RBP10.61□□□□□ -0.71
RN7SKP253-201ENST00000516424 SUSD3Q96L08 255 aa10.61□□□□□ -0.71
RN7SKP253-201ENST00000516424 ANKIB1Q9P2G1 1089 aa10.61□□□□□ -0.71
RN7SKP253-201ENST00000516424 DCAF1Q9Y4B6 1507 aa10.6□□□□□ -0.71
RN7SKP253-201ENST00000516424 ALBP02768 609 aa10.6□□□□□ -0.71
RN7SKP253-201ENST00000516424 ADH7P40394 386 aa10.6□□□□□ -0.71
RN7SKP253-201ENST00000516424 C8orf86Q6ZUL3 223 aa10.6□□□□□ -0.71
RN7SKP253-201ENST00000516424 ITGB7P26010 798 aa10.59□□□□□ -0.71
RN7SKP253-201ENST00000516424 GATA4P43694 442 aa10.59□□□□□ -0.71
RN7SKP253-201ENST00000516424 KCNQ4P56696 695 aa10.59□□□□□ -0.71
RN7SKP253-201ENST00000516424 NEUROD1Q13562 356 aa10.59□□□□□ -0.71
RN7SKP253-201ENST00000516424 SPDYE3A6NKU9 549 aa10.58□□□□□ -0.72
RN7SKP253-201ENST00000516424 FAM229AH3BQW9 127 aa10.58□□□□□ -0.72
RN7SKP253-201ENST00000516424 ALDH16A1Q8IZ83 802 aa10.58□□□□□ -0.72
RN7SKP253-201ENST00000516424 MICALL1Q8N3F8 863 aa10.58□□□□□ -0.72
RN7SKP253-201ENST00000516424 GLMNQ92990 594 aa10.58□□□□□ -0.72
RN7SKP253-201ENST00000516424 CLUAP1Q96AJ1 413 aa10.58□□□□□ -0.72
RN7SKP253-201ENST00000516424 PRDM6Q9NQX0 595 aa10.58□□□□□ -0.72
RN7SKP253-201ENST00000516424 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
RN7SKP253-201ENST00000516424 RBM19Q9Y4C8 960 aaKnown RBP10.58□□□□□ -0.72
RN7SKP253-201ENST00000516424 PRRT3Q5FWE3 981 aa10.57□□□□□ -0.72
RN7SKP253-201ENST00000516424 Q8N3U1 123 aa10.57□□□□□ -0.72
RN7SKP253-201ENST00000516424 TFIP11Q9UBB9 837 aaKnown RBP10.57□□□□□ -0.72
RN7SKP253-201ENST00000516424 ATAD2Q6PL18 1390 aa10.56□□□□□ -0.72
RN7SKP253-201ENST00000516424 RASA1P20936 1047 aa10.56□□□□□ -0.72
RN7SKP253-201ENST00000516424 SCG3Q8WXD2 468 aaKnown RBP10.56□□□□□ -0.72
RN7SKP253-201ENST00000516424 C2orf49Q9BVC5 232 aaPredicted RBP10.56□□□□□ -0.72
RN7SKP253-201ENST00000516424 SEMA6BQ9H3T3 888 aa10.56□□□□□ -0.72
RN7SKP253-201ENST00000516424 MAFBQ9Y5Q3 323 aaPredicted RBP10.56□□□□□ -0.72
RN7SKP253-201ENST00000516424 FNBP4Q8N3X1 1017 aaPredicted RBP10.55□□□□□ -0.72
RN7SKP253-201ENST00000516424 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
RN7SKP253-201ENST00000516424 BHMTQ93088 406 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms