RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 CACNA1SQ13698 1873 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 SMARCA5O60264 1052 aaPredicted RBP7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 A1BGP04217 495 aa7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 CWF19L2Q2TBE0 894 aaKnown RBP7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 ERICH6Q7L0X2 663 aa7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 UNC5CLQ8IV45 518 aa7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 LINS1Q8NG48 757 aa7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 PIGBQ92521 554 aa7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 ACSBG1Q96GR2 724 aa7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 TEX13AQ9BXU3 409 aaPredicted RBP7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 ASAP1Q9ULH1 1129 aa7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 EXOC6BQ9Y2D4 811 aa7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 ERBB4Q15303 1308 aa7.4□□□□□ -1.22
RN7SKP288-201ENST00000516227 CCDC88AQ3V6T2 1871 aa7.4□□□□□ -1.23
RN7SKP288-201ENST00000516227 C4AP0C0L4 1744 aa7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 C4BP0C0L5 1744 aa7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 BCL9O00512 1426 aa7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 SPATA31A6Q5VVP1 1343 aa7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 PNMA6EA0A0J9YXQ4 647 aa7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 NBPF7P0C2Y1 421 aaPredicted RBP7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 PRIM1P49642 420 aaKnown RBP7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 OS9Q13438 667 aaPredicted RBP7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 FAM98CQ17RN3 349 aaKnown RBP7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 PPP1R42Q7Z4L9 355 aa7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 METTL22Q9BUU2 404 aaPredicted RBP7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 UPF2Q9HAU5 1272 aaKnown RBP7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 ATG3Q9NT62 314 aa7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 TCHHQ07283 1943 aa7.39□□□□□ -1.23
RN7SKP288-201ENST00000516227 ATP5J2-PTCD1G3V325 749 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 GRM8O00222 908 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 SRGAP3O43295 1099 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 SURF6O75683 361 aaKnown RBP7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 STARD3NLO95772 234 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 BARGINQ6ZT62 677 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 DNAJC10Q8IXB1 793 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 PLBD2Q8NHP8 589 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 LRRCC1Q9C099 1032 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 USP21Q9UK80 565 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 UBR3Q6ZT12 1888 aa7.38□□□□□ -1.23
RN7SKP288-201ENST00000516227 BCL9LQ86UU0 1499 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 NEURL1BA8MQ27 555 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 NBPF26B4DH59 902 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 HSPA1LP34931 641 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 GCKRQ14397 625 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 VPS72Q15906 364 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 HSP90AB4PQ58FF6 505 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 NBPF14Q5TI25 921 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 KIF6Q6ZMV9 814 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 TTLL7Q6ZT98 887 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 PLEKHM2Q8IWE5 1019 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 C16orf71Q8IYS4 520 aaPredicted RBP7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 VSIG10Q8N0Z9 540 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 NBPF15Q8N660 670 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 MARCH10Q8NA82 808 aaPredicted RBP7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 SSH3Q8TE77 659 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 DDRGK1Q96HY6 314 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 ZBTB3Q9H5J0 574 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 DAXXQ9UER7 740 aaPredicted RBP7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 AKAP11Q9UKA4 1901 aa7.37□□□□□ -1.23
RN7SKP288-201ENST00000516227 IBTKQ9P2D0 1353 aaPredicted RBP7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 SCN7AQ01118 1682 aa7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 A0A087WZG4 1122 aa7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 RAB11FIP3O75154 756 aa7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 IGKV5-2P06315 115 aa7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 MFAP1P55081 439 aaKnown RBP7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 TTC22Q5TAA0 569 aa7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 JARID2Q92833 1246 aaPredicted RBP7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 SUCLG2Q96I99 432 aa7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 IPO9Q96P70 1041 aaKnown RBP7.36□□□□□ -1.23
RN7SKP288-201ENST00000516227 ARAP2Q8WZ64 1704 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 AFF2P51816 1311 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 SEC24BO95487 1268 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 ATP6V1AP38606 617 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 G3BP1Q13283 466 aaKnown RBP eCLIP7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 POLA2Q14181 598 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 BMP2KLQ5H9B9 411 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 UBE3BQ7Z3V4 1068 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 LRP10Q7Z4F1 713 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 OTUD7AQ8TE49 926 aaPredicted RBP7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 KIF1BPQ96EK5 621 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 BICC1Q9H694 974 aaKnown RBP7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 IL1RAPL2Q9NP60 686 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 CWC25Q9NXE8 425 aaPredicted RBP7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 CHMP3Q9Y3E7 222 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 MYH6P13533 1939 aa7.35□□□□□ -1.23
RN7SKP288-201ENST00000516227 UTYO14607 1347 aa7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 TRIM6-TRIM34B2RNG4 842 aa7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 CDC45O75419 566 aa7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 RTL5Q5HYW3 569 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 CASC1Q6TDU7 716 aa7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 ERC1Q8IUD2 1116 aa7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 FNBP4Q8N3X1 1017 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 RHPN1Q8TCX5 695 aa7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 SMARCC1Q92922 1105 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 PA2G4Q9UQ80 394 aaKnown RBP7.34□□□□□ -1.23
RN7SKP288-201ENST00000516227 EIF5BO60841 1220 aaKnown RBP7.33□□□□□ -1.24
RN7SKP288-201ENST00000516227 CYP19A1P11511 503 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP288-201ENST00000516227 MX1P20591 662 aa7.33□□□□□ -1.24
RN7SKP288-201ENST00000516227 PDE1AP54750 535 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms