RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SLC4A9Q96Q91 983 aa9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 MYD88Q99836 296 aa9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 TSHZ2Q9NRE2 1034 aa9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 C9orf78Q9NZ63 289 aaPredicted RBP9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 LRRFIP2Q9Y608 721 aaKnown RBP9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ANKRD36CQ5JPF3 1778 aa9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 RREB1Q92766 1687 aa9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 LOC102724428A0A0B4J2F2 783 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NEURL1BA8MQ27 555 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 GRM8O00222 908 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NBPF7P0C2Y1 421 aaPredicted RBP9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 SIK1P57059 783 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ATP8B2P98198 1209 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NUCB1Q02818 461 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ZNF772Q68DY9 489 aaPredicted RBP9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 KIF6Q6ZMV9 814 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 TTLL7Q6ZT98 887 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 DCTPP1Q9H773 170 aa9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ZNF330Q9Y3S2 320 aaPredicted RBP9.53□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NUP98P52948 1817 aa9.52□□□□□ -0.89
SCARNA20.1-201ENST00000516009 MYH14Q7Z406 1995 aaKnown RBP9.52□□□□□ -0.89
SCARNA20.1-201ENST00000516009 LY75O60449 1722 aa9.52□□□□□ -0.89
SCARNA20.1-201ENST00000516009 IGKV5-2P06315 115 aa9.52□□□□□ -0.89
SCARNA20.1-201ENST00000516009 ANKRD45Q5TZF3 282 aa9.52□□□□□ -0.89
SCARNA20.1-201ENST00000516009 NPM2Q86SE8 214 aaKnown RBP9.52□□□□□ -0.89
SCARNA20.1-201ENST00000516009 CHD1LQ86WJ1 897 aa9.52□□□□□ -0.89
SCARNA20.1-201ENST00000516009 ZBTB47Q9UFB7 747 aaPredicted RBP9.52□□□□□ -0.89
SCARNA20.1-201ENST00000516009 UTYO14607 1347 aa9.52□□□□□ -0.89
SCARNA20.1-201ENST00000516009 IL6STP40189 918 aaPredicted RBP9.51□□□□□ -0.89
SCARNA20.1-201ENST00000516009 GCKRQ14397 625 aa9.51□□□□□ -0.89
SCARNA20.1-201ENST00000516009 LNPKQ9C0E8 428 aa9.51□□□□□ -0.89
SCARNA20.1-201ENST00000516009 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
SCARNA20.1-201ENST00000516009 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
SCARNA20.1-201ENST00000516009 ZBTB1Q9Y2K1 713 aa9.51□□□□□ -0.89
SCARNA20.1-201ENST00000516009 TAF1LQ8IZX4 1826 aa9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 PNMA6EA0A0J9YXQ4 647 aa9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 ATP5J2-PTCD1G3V325 749 aa9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 RBM6P78332 1123 aaKnown RBP9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 ITPK1Q13572 414 aa9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 FAM182BQ5T319 152 aa9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 PPP1R42Q7Z4L9 355 aa9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 SSH3Q8TE77 659 aa9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 ARXQ96QS3 562 aa9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 CWC25Q9NXE8 425 aaPredicted RBP9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 MAP3K15Q6ZN16 1313 aa9.5□□□□□ -0.89
SCARNA20.1-201ENST00000516009 SRGAP3O43295 1099 aa9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 PDE4AP27815 886 aa9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 CRKLP46109 303 aaKnown RBP9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 TCIRG1Q13488 830 aa9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 MTX1Q13505 466 aa9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 HSP90AB3PQ58FF7 597 aa9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 INTS5Q6P9B9 1019 aaKnown RBP9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 KRT27Q7Z3Y8 459 aa9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 CCDC191Q8NCU4 936 aa9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 FBXO41Q8TF61 875 aa9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 SUCLG2Q96I99 432 aa9.49□□□□□ -0.89
SCARNA20.1-201ENST00000516009 A0A087WZG4 1122 aa9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 EIF5P55010 431 aaKnown RBP9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 POLA2Q14181 598 aa9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 FAM161AQ3B820 660 aa9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 FAM196AQ6ZSG2 479 aa9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 PTF1AQ7RTS3 328 aa9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 UBE3BQ7Z3V4 1068 aa9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 DZIP3Q86Y13 1208 aaKnown RBP9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 ISCA1Q9BUE6 129 aa9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 BCL11BQ9C0K0 894 aaPredicted RBP9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 COL15A1P39059 1388 aa9.48□□□□□ -0.89
SCARNA20.1-201ENST00000516009 BCORQ6W2J9 1755 aa9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 ERVV-1B6SEH8 477 aa9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 APBB1O00213 710 aa9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 SURF6O75683 361 aaKnown RBP9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 TRIM28Q13263 835 aaKnown RBP9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 GIGYF2Q6Y7W6 1299 aaKnown RBP9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 KAZALD1Q96I82 304 aa9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 BICC1Q9H694 974 aaKnown RBP9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 EXOC6BQ9Y2D4 811 aa9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 CNTNAP4Q9C0A0 1308 aa9.47□□□□□ -0.89
SCARNA20.1-201ENST00000516009 MYH3P11055 1940 aa9.46□□□□□ -0.89
SCARNA20.1-201ENST00000516009 H7C1W4 665 aa9.46□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RAB11FIP3O75154 756 aa9.46□□□□□ -0.9
SCARNA20.1-201ENST00000516009 HSP90AB4PQ58FF6 505 aa9.46□□□□□ -0.9
SCARNA20.1-201ENST00000516009 LINC00116Q8NCU8 138 aa9.46□□□□□ -0.9
SCARNA20.1-201ENST00000516009 JARID2Q92833 1246 aaPredicted RBP9.46□□□□□ -0.9
SCARNA20.1-201ENST00000516009 LRRCC1Q9C099 1032 aa9.46□□□□□ -0.9
SCARNA20.1-201ENST00000516009 CCNL1Q9UK58 526 aaPredicted RBP9.46□□□□□ -0.9
SCARNA20.1-201ENST00000516009 TBC1D2BQ9UPU7 963 aa9.46□□□□□ -0.9
SCARNA20.1-201ENST00000516009 C4BP0C0L5 1744 aa9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 SMARCA5O60264 1052 aaPredicted RBP9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RXRBP28702 533 aa9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 CASP7P55210 303 aa9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 OS9Q13438 667 aaPredicted RBP9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 HLFQ16534 295 aa9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 EPHA10Q5JZY3 1008 aa9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RC3H1Q5TC82 1133 aaKnown RBP9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 BCL11AQ9H165 835 aa9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 NOP58Q9Y2X3 529 aaKnown RBP9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RBM19Q9Y4C8 960 aaKnown RBP9.45□□□□□ -0.9
SCARNA20.1-201ENST00000516009 SCN7AQ01118 1682 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms