RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ELOA3CA0A087WX78 387 aaPredicted RBP7.01□□□□□ -1.29
HERC4-215ENST00000515753 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
HERC4-215ENST00000515753 ELOA3DA6NLF2 546 aaPredicted RBP7.01□□□□□ -1.29
HERC4-215ENST00000515753 EML1O00423 815 aa7.01□□□□□ -1.29
HERC4-215ENST00000515753 ELOA3BQ3SY89 546 aa7.01□□□□□ -1.29
HERC4-215ENST00000515753 RAB44Q7Z6P3 723 aaPredicted RBP7.01□□□□□ -1.29
HERC4-215ENST00000515753 ELOA3Q8NG57 546 aa7.01□□□□□ -1.29
HERC4-215ENST00000515753 C7orf43Q8WVR3 580 aa7.01□□□□□ -1.29
HERC4-215ENST00000515753 SLC30A3Q99726 388 aa7.01□□□□□ -1.29
HERC4-215ENST00000515753 SEMA6BQ9H3T3 888 aa7.01□□□□□ -1.29
HERC4-215ENST00000515753 POM121CA8CG34 1229 aa7□□□□□ -1.29
HERC4-215ENST00000515753 LZTS3O60299 673 aaPredicted RBP7□□□□□ -1.29
HERC4-215ENST00000515753 ALAS2P22557 587 aa7□□□□□ -1.29
HERC4-215ENST00000515753 ITGB7P26010 798 aa7□□□□□ -1.29
HERC4-215ENST00000515753 LAMC2Q13753 1193 aa7□□□□□ -1.29
HERC4-215ENST00000515753 C8orf86Q6ZUL3 223 aa7□□□□□ -1.29
HERC4-215ENST00000515753 TPCN2Q8NHX9 752 aa7□□□□□ -1.29
HERC4-215ENST00000515753 KIAA1024Q9UPX6 916 aa7□□□□□ -1.29
HERC4-215ENST00000515753 HCN4Q9Y3Q4 1203 aa7□□□□□ -1.29
HERC4-215ENST00000515753 SERTM1A2A2V5 107 aa6.99□□□□□ -1.29
HERC4-215ENST00000515753 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
HERC4-215ENST00000515753 GATA4P43694 442 aa6.99□□□□□ -1.29
HERC4-215ENST00000515753 NFATC2IPQ8NCF5 419 aa6.99□□□□□ -1.29
HERC4-215ENST00000515753 RHPN1Q8TCX5 695 aa6.99□□□□□ -1.29
HERC4-215ENST00000515753 HSH2DQ96JZ2 352 aa6.99□□□□□ -1.29
HERC4-215ENST00000515753 PSMG3-AS1Q96PY0 264 aa6.99□□□□□ -1.29
HERC4-215ENST00000515753 M0R082 166 aa6.98□□□□□ -1.29
HERC4-215ENST00000515753 ZBTB7BO15156 539 aaPredicted RBP6.98□□□□□ -1.29
HERC4-215ENST00000515753 SPATA31C1P0DKV0 1188 aa6.98□□□□□ -1.29
HERC4-215ENST00000515753 ZNF417Q8TAU3 575 aa6.98□□□□□ -1.29
HERC4-215ENST00000515753 ADAMTS19Q8TE59 1207 aa6.98□□□□□ -1.29
HERC4-215ENST00000515753 ZNF587Q96SQ5 575 aaPredicted RBP6.98□□□□□ -1.29
HERC4-215ENST00000515753 MDFIQ99750 246 aa6.98□□□□□ -1.29
HERC4-215ENST00000515753 TSPAN10Q9H1Z9 355 aaPredicted RBP6.98□□□□□ -1.29
HERC4-215ENST00000515753 SIN3BO75182 1162 aa6.97□□□□□ -1.29
HERC4-215ENST00000515753 CLDN10P78369 228 aa6.97□□□□□ -1.29
HERC4-215ENST00000515753 CCDC102BQ68D86 513 aa6.97□□□□□ -1.29
HERC4-215ENST00000515753 WWC1Q8IX03 1113 aa6.97□□□□□ -1.29
HERC4-215ENST00000515753 STARD13Q9Y3M8 1113 aa6.97□□□□□ -1.29
HERC4-215ENST00000515753 USP17L3A6NCW0 530 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 USP17L4A6NCW7 530 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 SFI1A8K8P3 1242 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 ALBP02768 609 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 SPEM2Q0P670 501 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 USP17L2Q6R6M4 530 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 USP17L1Q7RTZ2 530 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 TRIM50Q86XT4 487 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 ZNF280CQ8ND82 737 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 CEP63Q96MT8 703 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 BRD7Q9NPI1 651 aa6.96□□□□□ -1.3
HERC4-215ENST00000515753 ADARB2-AS1A8MUL3 147 aa6.95□□□□□ -1.3
HERC4-215ENST00000515753 RAD21O60216 631 aa6.95□□□□□ -1.3
HERC4-215ENST00000515753 COL9A3Q14050 684 aaPredicted RBP6.95□□□□□ -1.3
HERC4-215ENST00000515753 PRRT3Q5FWE3 981 aa6.95□□□□□ -1.3
HERC4-215ENST00000515753 HDGFL1Q5TGJ6 251 aa6.95□□□□□ -1.3
HERC4-215ENST00000515753 UCN2Q96RP3 112 aa6.95□□□□□ -1.3
HERC4-215ENST00000515753 PHACTR1Q9C0D0 580 aa6.95□□□□□ -1.3
HERC4-215ENST00000515753 ADH7P40394 386 aa6.94□□□□□ -1.3
HERC4-215ENST00000515753 PSMA6P60900 246 aaKnown RBP6.94□□□□□ -1.3
HERC4-215ENST00000515753 GRIK4Q16099 956 aa6.94□□□□□ -1.3
HERC4-215ENST00000515753 MICALL1Q8N3F8 863 aa6.94□□□□□ -1.3
HERC4-215ENST00000515753 OGFOD1Q8N543 542 aa6.94□□□□□ -1.3
HERC4-215ENST00000515753 TSEN2Q8NCE0 465 aaKnown RBP6.94□□□□□ -1.3
HERC4-215ENST00000515753 TNFRSF25Q93038 417 aa6.94□□□□□ -1.3
HERC4-215ENST00000515753 ZNF594Q96JF6 807 aaPredicted RBP6.94□□□□□ -1.3
HERC4-215ENST00000515753 SPDYE3A6NKU9 549 aa6.93□□□□□ -1.3
HERC4-215ENST00000515753 APBA3O96018 575 aa6.93□□□□□ -1.3
HERC4-215ENST00000515753 UBTFP17480 764 aaKnown RBP6.93□□□□□ -1.3
HERC4-215ENST00000515753 ATP1A2P50993 1020 aa6.93□□□□□ -1.3
HERC4-215ENST00000515753 TBC1D8BQ0IIM8 1120 aa6.93□□□□□ -1.3
HERC4-215ENST00000515753 IGFLR1Q9H665 355 aa6.93□□□□□ -1.3
HERC4-215ENST00000515753 TPSG1Q9NRR2 321 aa6.93□□□□□ -1.3
HERC4-215ENST00000515753 MKRN1Q9UHC7 482 aaKnown RBP6.93□□□□□ -1.3
HERC4-215ENST00000515753 CHMP3Q9Y3E7 222 aa6.93□□□□□ -1.3
HERC4-215ENST00000515753 GPC6Q9Y625 555 aaPredicted RBP6.93□□□□□ -1.3
HERC4-215ENST00000515753 PPP1R12BO60237 982 aaPredicted RBP6.92□□□□□ -1.3
HERC4-215ENST00000515753 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
HERC4-215ENST00000515753 NEUROD1Q13562 356 aa6.92□□□□□ -1.3
HERC4-215ENST00000515753 RSPO4Q2I0M5 234 aaPredicted RBP6.92□□□□□ -1.3
HERC4-215ENST00000515753 ZMYM1Q5SVZ6 1142 aa6.92□□□□□ -1.3
HERC4-215ENST00000515753 C1orf53Q5VUE5 145 aa6.92□□□□□ -1.3
HERC4-215ENST00000515753 PLEKHM2Q8IWE5 1019 aa6.92□□□□□ -1.3
HERC4-215ENST00000515753 BHMTQ93088 406 aa6.92□□□□□ -1.3
HERC4-215ENST00000515753 SUSD3Q96L08 255 aa6.92□□□□□ -1.3
HERC4-215ENST00000515753 KCNH4Q9UQ05 1017 aa6.92□□□□□ -1.3
HERC4-215ENST00000515753 C21orf2O43822 256 aa6.91□□□□□ -1.3
HERC4-215ENST00000515753 ATP9BO43861 1147 aa6.91□□□□□ -1.3
HERC4-215ENST00000515753 NID1P14543 1247 aa6.91□□□□□ -1.3
HERC4-215ENST00000515753 TYRO3Q06418 890 aa6.91□□□□□ -1.3
HERC4-215ENST00000515753 ANKIB1Q9P2G1 1089 aa6.91□□□□□ -1.3
HERC4-215ENST00000515753 PALM3A6NDB9 673 aaPredicted RBP6.9□□□□□ -1.3
HERC4-215ENST00000515753 A6NJR5 290 aa6.9□□□□□ -1.3
HERC4-215ENST00000515753 LGR5O75473 907 aa6.9□□□□□ -1.3
HERC4-215ENST00000515753 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
HERC4-215ENST00000515753 TRAPPC3LQ5T215 181 aa6.9□□□□□ -1.3
HERC4-215ENST00000515753 C20orf204Q6ZNR8 217 aa6.9□□□□□ -1.3
HERC4-215ENST00000515753 ALDH16A1Q8IZ83 802 aa6.9□□□□□ -1.3
HERC4-215ENST00000515753 LARGE2Q8N3Y3 721 aa6.9□□□□□ -1.3
HERC4-215ENST00000515753 CHMP7Q8WUX9 453 aaPredicted RBP6.9□□□□□ -1.3
HERC4-215ENST00000515753 NGLY1Q96IV0 654 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms