RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 ARFGEF2Q9Y6D5 1785 aa14.34□□□□□ -0.11
CLDND1-231ENST00000515620 CCDC85CA6NKD9 419 aa14.34□□□□□ -0.11
CLDND1-231ENST00000515620 IL13P35225 146 aa14.34□□□□□ -0.11
CLDND1-231ENST00000515620 MAP2K1Q02750 393 aaPredicted RBP14.34□□□□□ -0.11
CLDND1-231ENST00000515620 DEFB115Q30KQ5 88 aa14.34□□□□□ -0.11
CLDND1-231ENST00000515620 MORC1Q86VD1 984 aa14.34□□□□□ -0.11
CLDND1-231ENST00000515620 HACL1Q9UJ83 578 aa14.34□□□□□ -0.11
CLDND1-231ENST00000515620 ABT1Q9ULW3 272 aaKnown RBP14.34□□□□□ -0.11
CLDND1-231ENST00000515620 TBC1D2BQ9UPU7 963 aa14.34□□□□□ -0.11
CLDND1-231ENST00000515620 SRGNP10124 158 aa14.33□□□□□ -0.12
CLDND1-231ENST00000515620 EPHX2P34913 555 aa14.33□□□□□ -0.12
CLDND1-231ENST00000515620 ST5P78524 1137 aa14.33□□□□□ -0.12
CLDND1-231ENST00000515620 MAP1SQ66K74 1059 aaPredicted RBP14.33□□□□□ -0.12
CLDND1-231ENST00000515620 TTC5Q8N0Z6 440 aa14.33□□□□□ -0.12
CLDND1-231ENST00000515620 WDR33Q9C0J8 1336 aaKnown RBP14.33□□□□□ -0.12
CLDND1-231ENST00000515620 CCDC93Q567U6 631 aa14.32□□□□□ -0.12
CLDND1-231ENST00000515620 CNTROBQ8N137 903 aa14.32□□□□□ -0.12
CLDND1-231ENST00000515620 MASTLQ96GX5 879 aa14.32□□□□□ -0.12
CLDND1-231ENST00000515620 SETDB2Q96T68 719 aa14.32□□□□□ -0.12
CLDND1-231ENST00000515620 ZNF277Q9NRM2 450 aaPredicted RBP14.32□□□□□ -0.12
CLDND1-231ENST00000515620 PCDH10Q9P2E7 1040 aa14.32□□□□□ -0.12
CLDND1-231ENST00000515620 RNF123Q5XPI4 1314 aa14.32□□□□□ -0.12
CLDND1-231ENST00000515620 THSD7BQ9C0I4 1608 aa14.31□□□□□ -0.12
CLDND1-231ENST00000515620 HMOX1P09601 288 aa14.31□□□□□ -0.12
CLDND1-231ENST00000515620 PANK3Q9H999 370 aa14.31□□□□□ -0.12
CLDND1-231ENST00000515620 FKBP4Q02790 459 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLDND1-231ENST00000515620 PAXIP1Q6ZW49 1069 aaPredicted RBP14.3□□□□□ -0.12
CLDND1-231ENST00000515620 PNMA8AQ86V59 439 aaPredicted RBP14.3□□□□□ -0.12
CLDND1-231ENST00000515620 ZNF496Q96IT1 587 aaPredicted RBP14.3□□□□□ -0.12
CLDND1-231ENST00000515620 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
CLDND1-231ENST00000515620 GRM1Q13255 1194 aa14.29□□□□□ -0.12
CLDND1-231ENST00000515620 MTHFSDQ2M296 383 aaKnown RBP14.29□□□□□ -0.12
CLDND1-231ENST00000515620 C7orf43Q8WVR3 580 aa14.29□□□□□ -0.12
CLDND1-231ENST00000515620 BEGAINQ9BUH8 593 aa14.29□□□□□ -0.12
CLDND1-231ENST00000515620 HEG1Q9ULI3 1381 aa14.29□□□□□ -0.12
CLDND1-231ENST00000515620 BCORQ6W2J9 1755 aa14.29□□□□□ -0.12
CLDND1-231ENST00000515620 IL6STP40189 918 aaPredicted RBP14.28□□□□□ -0.12
CLDND1-231ENST00000515620 RGS19P49795 217 aa14.28□□□□□ -0.12
CLDND1-231ENST00000515620 OLFM4Q6UX06 510 aa14.28□□□□□ -0.12
CLDND1-231ENST00000515620 NPM2Q86SE8 214 aaKnown RBP14.28□□□□□ -0.12
CLDND1-231ENST00000515620 CAPNS2Q96L46 248 aa14.28□□□□□ -0.12
CLDND1-231ENST00000515620 A1BGP04217 495 aa14.27□□□□□ -0.13
CLDND1-231ENST00000515620 NPR1P16066 1061 aa14.27□□□□□ -0.13
CLDND1-231ENST00000515620 NBPF5PQ86XG9 351 aaPredicted RBP14.27□□□□□ -0.13
CLDND1-231ENST00000515620 CFAP44Q96MT7 982 aa14.27□□□□□ -0.13
CLDND1-231ENST00000515620 DDX21Q9NR30 783 aaKnown RBP eCLIP14.27□□□□□ -0.13
CLDND1-231ENST00000515620 TSKSQ9UJT2 592 aa14.27□□□□□ -0.13
CLDND1-231ENST00000515620 IARSP41252 1262 aaKnown RBP14.26□□□□□ -0.13
CLDND1-231ENST00000515620 FMR1Q06787 632 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLDND1-231ENST00000515620 CYP4F22Q6NT55 531 aa14.26□□□□□ -0.13
CLDND1-231ENST00000515620 ZNF790Q6PG37 636 aa14.26□□□□□ -0.13
CLDND1-231ENST00000515620 DZIP3Q86Y13 1208 aaKnown RBP14.26□□□□□ -0.13
CLDND1-231ENST00000515620 TEX13AQ9BXU3 409 aaPredicted RBP14.26□□□□□ -0.13
CLDND1-231ENST00000515620 LTBP1Q14766 1721 aa14.26□□□□□ -0.13
CLDND1-231ENST00000515620 FZD9O00144 591 aa14.25□□□□□ -0.13
CLDND1-231ENST00000515620 ECE1P42892 770 aa14.25□□□□□ -0.13
CLDND1-231ENST00000515620 TEFQ10587 303 aa14.25□□□□□ -0.13
CLDND1-231ENST00000515620 RTKN2Q8IZC4 609 aa14.25□□□□□ -0.13
CLDND1-231ENST00000515620 GPC2Q8N158 579 aa14.25□□□□□ -0.13
CLDND1-231ENST00000515620 GPR101Q96P66 508 aaPredicted RBP14.25□□□□□ -0.13
CLDND1-231ENST00000515620 PIP4K2AP48426 406 aaPredicted RBP14.24□□□□□ -0.13
CLDND1-231ENST00000515620 SYNE4Q8N205 404 aa14.24□□□□□ -0.13
CLDND1-231ENST00000515620 LMOD1P29536 600 aaPredicted RBP14.23□□□□□ -0.13
CLDND1-231ENST00000515620 FMNL2Q96PY5 1086 aa14.23□□□□□ -0.13
CLDND1-231ENST00000515620 GJA3Q9Y6H8 435 aa14.23□□□□□ -0.13
CLDND1-231ENST00000515620 SIPA1L3O60292 1781 aaPredicted RBP14.22□□□□□ -0.13
CLDND1-231ENST00000515620 TRAF5O00463 557 aa14.22□□□□□ -0.13
CLDND1-231ENST00000515620 AOC2O75106 756 aa14.22□□□□□ -0.13
CLDND1-231ENST00000515620 JDP2Q8WYK2 163 aa14.22□□□□□ -0.13
CLDND1-231ENST00000515620 MCOLN1Q9GZU1 580 aa14.22□□□□□ -0.13
CLDND1-231ENST00000515620 KNSTRNQ9Y448 316 aa14.22□□□□□ -0.13
CLDND1-231ENST00000515620 COL4A5P29400 1685 aa14.22□□□□□ -0.13
CLDND1-231ENST00000515620 KLRG2A4D1S0 409 aaPredicted RBP14.21□□□□□ -0.13
CLDND1-231ENST00000515620 FAM177BA6PVY3 158 aa14.21□□□□□ -0.13
CLDND1-231ENST00000515620 EIF6P56537 245 aaKnown RBP14.21□□□□□ -0.13
CLDND1-231ENST00000515620 IL17REQ8NFR9 667 aa14.21□□□□□ -0.13
CLDND1-231ENST00000515620 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.13
CLDND1-231ENST00000515620 EPS15P42566 896 aa14.2□□□□□ -0.14
CLDND1-231ENST00000515620 CST9Q5W186 159 aa14.2□□□□□ -0.14
CLDND1-231ENST00000515620 CLEC4GQ6UXB4 293 aa14.2□□□□□ -0.14
CLDND1-231ENST00000515620 TLL2Q9Y6L7 1015 aa14.2□□□□□ -0.14
CLDND1-231ENST00000515620 SNED1Q8TER0 1413 aa14.2□□□□□ -0.14
CLDND1-231ENST00000515620 GNAT3A8MTJ3 354 aa14.19□□□□□ -0.14
CLDND1-231ENST00000515620 KCNQ3O43525 872 aa14.19□□□□□ -0.14
CLDND1-231ENST00000515620 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
CLDND1-231ENST00000515620 SCNN1DP51172 638 aa14.19□□□□□ -0.14
CLDND1-231ENST00000515620 TPTE2Q6XPS3 522 aa14.19□□□□□ -0.14
CLDND1-231ENST00000515620 PSMD1Q99460 953 aa14.19□□□□□ -0.14
CLDND1-231ENST00000515620 NIP7Q9Y221 180 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLDND1-231ENST00000515620 HSPA5P11021 654 aaKnown RBP14.18□□□□□ -0.14
CLDND1-231ENST00000515620 ALDH1B1P30837 517 aa14.18□□□□□ -0.14
CLDND1-231ENST00000515620 MAP2K2P36507 400 aa14.18□□□□□ -0.14
CLDND1-231ENST00000515620 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
CLDND1-231ENST00000515620 USP16Q9Y5T5 823 aa14.18□□□□□ -0.14
CLDND1-231ENST00000515620 TRPM7Q96QT4 1865 aa14.18□□□□□ -0.14
CLDND1-231ENST00000515620 PRAMEF22A3QJZ6 481 aa14.17□□□□□ -0.14
CLDND1-231ENST00000515620 CA12O43570 354 aa14.17□□□□□ -0.14
CLDND1-231ENST00000515620 EIF4G2P78344 907 aaKnown RBP eCLIP14.17□□□□□ -0.14
CLDND1-231ENST00000515620 DGKZQ13574 1117 aa14.17□□□□□ -0.14
CLDND1-231ENST00000515620 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms