RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 U2AF1L5P0DN76 240 aaPredicted RBP20.08■□□□□ 0.81
DDR1-278ENST00000515233 SRGNP10124 158 aa20.08■□□□□ 0.81
DDR1-278ENST00000515233 U2AF1Q01081 240 aaKnown RBP eCLIP20.08■□□□□ 0.81
DDR1-278ENST00000515233 STYK1Q6J9G0 422 aa20.08■□□□□ 0.81
DDR1-278ENST00000515233 BCORQ6W2J9 1755 aa20.08■□□□□ 0.8
DDR1-278ENST00000515233 ST5P78524 1137 aa20.07■□□□□ 0.8
DDR1-278ENST00000515233 MCM10Q7L590 875 aa20.07■□□□□ 0.8
DDR1-278ENST00000515233 COL11A2P13942 1736 aaPredicted RBP20.07■□□□□ 0.8
DDR1-278ENST00000515233 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
DDR1-278ENST00000515233 RGL2O15211 777 aa20.06■□□□□ 0.8
DDR1-278ENST00000515233 NPHP1O15259 732 aa20.06■□□□□ 0.8
DDR1-278ENST00000515233 MASTLQ96GX5 879 aa20.06■□□□□ 0.8
DDR1-278ENST00000515233 ZNF219Q9P2Y4 722 aaPredicted RBP20.06■□□□□ 0.8
DDR1-278ENST00000515233 SLX4Q8IY92 1834 aa20.05■□□□□ 0.8
DDR1-278ENST00000515233 ERFEQ4G0M1 354 aa20.05■□□□□ 0.8
DDR1-278ENST00000515233 PIP4K2AP48426 406 aaPredicted RBP20.04■□□□□ 0.8
DDR1-278ENST00000515233 SOGA3Q5TF21 947 aa20.04■□□□□ 0.8
DDR1-278ENST00000515233 TAOK3Q9H2K8 898 aa20.04■□□□□ 0.8
DDR1-278ENST00000515233 ZNF652Q9Y2D9 606 aa20.04■□□□□ 0.8
DDR1-278ENST00000515233 KLRG2A4D1S0 409 aaPredicted RBP20.03■□□□□ 0.8
DDR1-278ENST00000515233 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
DDR1-278ENST00000515233 PRPF40BQ6NWY9 871 aaKnown RBP20.03■□□□□ 0.8
DDR1-278ENST00000515233 ARFGEF2Q9Y6D5 1785 aa20.03■□□□□ 0.8
DDR1-278ENST00000515233 NBPF26B4DH59 902 aa20.02■□□□□ 0.8
DDR1-278ENST00000515233 DCTN1Q14203 1278 aa20.02■□□□□ 0.8
DDR1-278ENST00000515233 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.8
DDR1-278ENST00000515233 TPTE2Q6XPS3 522 aa20.02■□□□□ 0.8
DDR1-278ENST00000515233 NBPF5PQ86XG9 351 aaPredicted RBP20.02■□□□□ 0.8
DDR1-278ENST00000515233 NBPF15Q8N660 670 aa20.02■□□□□ 0.8
DDR1-278ENST00000515233 C7orf43Q8WVR3 580 aa20.02■□□□□ 0.8
DDR1-278ENST00000515233 CACNA1SQ13698 1873 aa20■□□□□ 0.79
DDR1-278ENST00000515233 NPR1P16066 1061 aa19.99■□□□□ 0.79
DDR1-278ENST00000515233 NIP7Q9Y221 180 aaKnown RBP eCLIP19.99■□□□□ 0.79
DDR1-278ENST00000515233 DDNO94850 711 aaPredicted RBP19.98■□□□□ 0.79
DDR1-278ENST00000515233 CCDC93Q567U6 631 aa19.97■□□□□ 0.79
DDR1-278ENST00000515233 HLFQ16534 295 aa19.96■□□□□ 0.79
DDR1-278ENST00000515233 COL13A1Q5TAT6 717 aaPredicted RBP19.96■□□□□ 0.79
DDR1-278ENST00000515233 CHADLQ6NUI6 762 aa19.96■□□□□ 0.79
DDR1-278ENST00000515233 PNISRQ8TF01 805 aaKnown RBP19.96■□□□□ 0.79
DDR1-278ENST00000515233 PCNTO95613 3336 aa19.95■□□□□ 0.78
DDR1-278ENST00000515233 NEFMP07197 916 aa19.95■□□□□ 0.78
DDR1-278ENST00000515233 MIS18AQ9NYP9 233 aa19.95■□□□□ 0.78
DDR1-278ENST00000515233 ERVV-1B6SEH8 477 aa19.94■□□□□ 0.78
DDR1-278ENST00000515233 ALDH1B1P30837 517 aa19.94■□□□□ 0.78
DDR1-278ENST00000515233 FKBP4Q02790 459 aaKnown RBP eCLIP19.94■□□□□ 0.78
DDR1-278ENST00000515233 L3MBTL3Q96JM7 780 aaPredicted RBP19.94■□□□□ 0.78
DDR1-278ENST00000515233 PLEKHF1Q96S99 279 aa19.94■□□□□ 0.78
DDR1-278ENST00000515233 IQCA1LA6NCM1 817 aa19.93■□□□□ 0.78
DDR1-278ENST00000515233 RTKN2Q8IZC4 609 aa19.93■□□□□ 0.78
DDR1-278ENST00000515233 DLG5Q8TDM6 1919 aa19.93■□□□□ 0.78
DDR1-278ENST00000515233 LAMB4A4D0S4 1761 aa19.93■□□□□ 0.78
DDR1-278ENST00000515233 SCN4AP35499 1836 aa19.92■□□□□ 0.78
DDR1-278ENST00000515233 FAM177BA6PVY3 158 aa19.91■□□□□ 0.78
DDR1-278ENST00000515233 POTEIP0CG38 1075 aa19.91■□□□□ 0.78
DDR1-278ENST00000515233 POTEJP0CG39 1038 aa19.91■□□□□ 0.78
DDR1-278ENST00000515233 GTF2E1P29083 439 aaPredicted RBP19.91■□□□□ 0.78
DDR1-278ENST00000515233 EIF4A1P60842 406 aaKnown RBP19.91■□□□□ 0.78
DDR1-278ENST00000515233 NYXQ9GZU5 481 aa19.91■□□□□ 0.78
DDR1-278ENST00000515233 CREBZFQ9NS37 354 aa19.91■□□□□ 0.78
DDR1-278ENST00000515233 KDM3BQ7LBC6 1761 aa19.9■□□□□ 0.78
DDR1-278ENST00000515233 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
DDR1-278ENST00000515233 CRY2Q49AN0 593 aa19.9■□□□□ 0.78
DDR1-278ENST00000515233 PNNQ9H307 717 aaKnown RBP19.9■□□□□ 0.78
DDR1-278ENST00000515233 MAP3K15Q6ZN16 1313 aa19.9■□□□□ 0.78
DDR1-278ENST00000515233 NUP98P52948 1817 aa19.9■□□□□ 0.78
DDR1-278ENST00000515233 HSPA1AP0DMV8 641 aaKnown RBP19.89■□□□□ 0.77
DDR1-278ENST00000515233 HSPA1BP0DMV9 641 aaKnown RBP19.89■□□□□ 0.77
DDR1-278ENST00000515233 OLFM4Q6UX06 510 aa19.89■□□□□ 0.77
DDR1-278ENST00000515233 NGEFQ8N5V2 710 aa19.89■□□□□ 0.77
DDR1-278ENST00000515233 TAF1DQ9H5J8 278 aaPredicted RBP19.89■□□□□ 0.77
DDR1-278ENST00000515233 ZNF277Q9NRM2 450 aaPredicted RBP19.89■□□□□ 0.77
DDR1-278ENST00000515233 FZD9O00144 591 aa19.88■□□□□ 0.77
DDR1-278ENST00000515233 LDHDQ86WU2 507 aa19.88■□□□□ 0.77
DDR1-278ENST00000515233 RRP7AQ9Y3A4 280 aaKnown RBP19.88■□□□□ 0.77
DDR1-278ENST00000515233 PASKQ96RG2 1323 aa19.87■□□□□ 0.77
DDR1-278ENST00000515233 IARSP41252 1262 aaKnown RBP19.87■□□□□ 0.77
DDR1-278ENST00000515233 CC2D2BQ6DHV5 1058 aa19.87■□□□□ 0.77
DDR1-278ENST00000515233 SYNE4Q8N205 404 aa19.87■□□□□ 0.77
DDR1-278ENST00000515233 PSMD1Q99460 953 aa19.87■□□□□ 0.77
DDR1-278ENST00000515233 RIC1Q4ADV7 1423 aa19.86■□□□□ 0.77
DDR1-278ENST00000515233 SNED1Q8TER0 1413 aa19.86■□□□□ 0.77
DDR1-278ENST00000515233 HOXA10P31260 410 aaPredicted RBP19.86■□□□□ 0.77
DDR1-278ENST00000515233 KIF6Q6ZMV9 814 aa19.86■□□□□ 0.77
DDR1-278ENST00000515233 TTLL7Q6ZT98 887 aa19.86■□□□□ 0.77
DDR1-278ENST00000515233 NUTM1Q86Y26 1132 aa19.86■□□□□ 0.77
DDR1-278ENST00000515233 IBTKQ9P2D0 1353 aaPredicted RBP19.85■□□□□ 0.77
DDR1-278ENST00000515233 ERBB4Q15303 1308 aa19.85■□□□□ 0.77
DDR1-278ENST00000515233 ZNF541Q9H0D2 1346 aa19.85■□□□□ 0.77
DDR1-278ENST00000515233 MYL6BP14649 208 aa19.85■□□□□ 0.77
DDR1-278ENST00000515233 HACL1Q9UJ83 578 aa19.85■□□□□ 0.77
DDR1-278ENST00000515233 ABCC12Q96J65 1359 aa19.84■□□□□ 0.77
DDR1-278ENST00000515233 ITGBL1O95965 494 aaPredicted RBP19.84■□□□□ 0.77
DDR1-278ENST00000515233 GRIPAP1Q4V328 841 aa19.84■□□□□ 0.77
DDR1-278ENST00000515233 GIGYF2Q6Y7W6 1299 aaKnown RBP19.84■□□□□ 0.77
DDR1-278ENST00000515233 ZNF34Q8IZ26 560 aa19.84■□□□□ 0.77
DDR1-278ENST00000515233 TNS4Q8IZW8 715 aa19.84■□□□□ 0.77
DDR1-278ENST00000515233 THUMPD2Q9BTF0 503 aaKnown RBP19.84■□□□□ 0.77
DDR1-278ENST00000515233 UBN2Q6ZU65 1347 aa19.83■□□□□ 0.77
DDR1-278ENST00000515233 SUSD4Q5VX71 490 aa19.83■□□□□ 0.77
DDR1-278ENST00000515233 PNMA8AQ86V59 439 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 396.8 ms