RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 DNAAF4Q8WXU2 420 aa21.33■■□□□ 1
AP3S1-208ENST00000515066 MAP3K2Q9Y2U5 619 aa21.33■■□□□ 1
AP3S1-208ENST00000515066 ATP10DQ9P241 1426 aa21.32■■□□□ 1
AP3S1-208ENST00000515066 DDX58O95786 925 aaKnown RBP21.32■■□□□ 1
AP3S1-208ENST00000515066 ANKRD13DQ6ZTN6 518 aa21.32■■□□□ 1
AP3S1-208ENST00000515066 ITPRIPQ8IWB1 547 aa21.32■■□□□ 1
AP3S1-208ENST00000515066 ZNF330Q9Y3S2 320 aaPredicted RBP21.32■■□□□ 1
AP3S1-208ENST00000515066 SLC4A10Q6U841 1118 aa21.31■■□□□ 1
AP3S1-208ENST00000515066 COL15A1P39059 1388 aa21.31■■□□□ 1
AP3S1-208ENST00000515066 AMIGO3Q86WK7 504 aa21.31■■□□□ 1
AP3S1-208ENST00000515066 PLBD2Q8NHP8 589 aa21.31■■□□□ 1
AP3S1-208ENST00000515066 SCN7AQ01118 1682 aa21.31■■□□□ 1
AP3S1-208ENST00000515066 BEND3Q5T5X7 828 aa21.29■■□□□ 1
AP3S1-208ENST00000515066 ERICH6BQ5W0A0 696 aa21.29■■□□□ 1
AP3S1-208ENST00000515066 RIC3Q7Z5B4 369 aa21.29■■□□□ 1
AP3S1-208ENST00000515066 CCT4P50991 539 aaKnown RBP21.28■■□□□ 1
AP3S1-208ENST00000515066 CAMKK2Q96RR4 588 aa21.28■■□□□ 1
AP3S1-208ENST00000515066 DDX19BQ9UMR2 479 aa21.28■■□□□ 1
AP3S1-208ENST00000515066 GNPATO15228 680 aa21.28■■□□□ 1
AP3S1-208ENST00000515066 RPS6KA4O75676 772 aa21.28■■□□□ 1
AP3S1-208ENST00000515066 METTL22Q9BUU2 404 aaPredicted RBP21.28■■□□□ 1
AP3S1-208ENST00000515066 ZBTB3Q9H5J0 574 aa21.28■■□□□ 1
AP3S1-208ENST00000515066 MAP3K15Q6ZN16 1313 aa21.27■■□□□ 1
AP3S1-208ENST00000515066 EN1Q05925 392 aaPredicted RBP21.27■■□□□ 1
AP3S1-208ENST00000515066 SMIM5Q71RC9 77 aa21.27■■□□□ 1
AP3S1-208ENST00000515066 ZBTB7BO15156 539 aaPredicted RBP21.26■□□□□ 0.99
AP3S1-208ENST00000515066 IGKV5-2P06315 115 aa21.26■□□□□ 0.99
AP3S1-208ENST00000515066 DZIP3Q86Y13 1208 aaKnown RBP21.26■□□□□ 0.99
AP3S1-208ENST00000515066 TBC1D2BQ9UPU7 963 aa21.26■□□□□ 0.99
AP3S1-208ENST00000515066 EZH2Q15910 746 aaKnown RBP21.25■□□□□ 0.99
AP3S1-208ENST00000515066 KIF6Q6ZMV9 814 aa21.25■□□□□ 0.99
AP3S1-208ENST00000515066 SRCIN1Q9C0H9 1055 aa21.25■□□□□ 0.99
AP3S1-208ENST00000515066 CWF19L2Q2TBE0 894 aaKnown RBP21.24■□□□□ 0.99
AP3S1-208ENST00000515066 LINS1Q8NG48 757 aa21.24■□□□□ 0.99
AP3S1-208ENST00000515066 AK7Q96M32 723 aa21.24■□□□□ 0.99
AP3S1-208ENST00000515066 ZBTB40Q9NUA8 1239 aa21.24■□□□□ 0.99
AP3S1-208ENST00000515066 IBTKQ9P2D0 1353 aaPredicted RBP21.24■□□□□ 0.99
AP3S1-208ENST00000515066 CAMTA2O94983 1202 aa21.24■□□□□ 0.99
AP3S1-208ENST00000515066 HLFQ16534 295 aa21.24■□□□□ 0.99
AP3S1-208ENST00000515066 DEFB132Q7Z7B7 95 aa21.24■□□□□ 0.99
AP3S1-208ENST00000515066 MYD88Q99836 296 aa21.24■□□□□ 0.99
AP3S1-208ENST00000515066 RTCBQ9Y3I0 505 aaKnown RBP21.24■□□□□ 0.99
AP3S1-208ENST00000515066 ERVV-1B6SEH8 477 aa21.23■□□□□ 0.99
AP3S1-208ENST00000515066 MEIS3Q99687 375 aa21.23■□□□□ 0.99
AP3S1-208ENST00000515066 NEURL1BA8MQ27 555 aa21.22■□□□□ 0.99
AP3S1-208ENST00000515066 BAG6P46379 1132 aa21.22■□□□□ 0.99
AP3S1-208ENST00000515066 ZNF827Q17R98 1081 aa21.22■□□□□ 0.99
AP3S1-208ENST00000515066 QSER1Q2KHR3 1735 aa21.22■□□□□ 0.99
AP3S1-208ENST00000515066 GIGYF2Q6Y7W6 1299 aaKnown RBP21.22■□□□□ 0.99
AP3S1-208ENST00000515066 NPM2Q86SE8 214 aaKnown RBP21.22■□□□□ 0.99
AP3S1-208ENST00000515066 ARXQ96QS3 562 aa21.22■□□□□ 0.99
AP3S1-208ENST00000515066 ALDH1L1O75891 902 aa21.21■□□□□ 0.99
AP3S1-208ENST00000515066 SF3B2Q13435 895 aaKnown RBP21.21■□□□□ 0.99
AP3S1-208ENST00000515066 AKT1S1Q96B36 256 aa21.21■□□□□ 0.99
AP3S1-208ENST00000515066 USP44Q9H0E7 712 aa21.21■□□□□ 0.99
AP3S1-208ENST00000515066 ATP5J2-PTCD1G3V325 749 aa21.21■□□□□ 0.99
AP3S1-208ENST00000515066 NEXNQ0ZGT2 675 aa21.21■□□□□ 0.99
AP3S1-208ENST00000515066 CCDC125Q86Z20 511 aa21.21■□□□□ 0.99
AP3S1-208ENST00000515066 A0A087WZG4 1122 aa21.2■□□□□ 0.98
AP3S1-208ENST00000515066 HMGB2P26583 209 aaKnown RBP21.2■□□□□ 0.98
AP3S1-208ENST00000515066 TCIRG1Q13488 830 aa21.2■□□□□ 0.98
AP3S1-208ENST00000515066 AAMPQ13685 434 aa21.2■□□□□ 0.98
AP3S1-208ENST00000515066 ARHGEF1Q92888 912 aaKnown RBP21.2■□□□□ 0.98
AP3S1-208ENST00000515066 ISCA1Q9BUE6 129 aa21.2■□□□□ 0.98
AP3S1-208ENST00000515066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.18■□□□□ 0.98
AP3S1-208ENST00000515066 PHF14O94880 888 aa21.18■□□□□ 0.98
AP3S1-208ENST00000515066 ADRA2BP18089 450 aa21.18■□□□□ 0.98
AP3S1-208ENST00000515066 SSFA2P28290 1259 aa21.18■□□□□ 0.98
AP3S1-208ENST00000515066 PPP4R2Q9NY27 417 aa21.18■□□□□ 0.98
AP3S1-208ENST00000515066 NARFQ9UHQ1 456 aa21.18■□□□□ 0.98
AP3S1-208ENST00000515066 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
AP3S1-208ENST00000515066 GCKRQ14397 625 aa21.18■□□□□ 0.98
AP3S1-208ENST00000515066 BCL2L12Q9HB09 334 aa21.18■□□□□ 0.98
AP3S1-208ENST00000515066 ANO8Q9HCE9 1232 aaPredicted RBP21.18■□□□□ 0.98
AP3S1-208ENST00000515066 PCDHB15Q9Y5E8 787 aa21.18■□□□□ 0.98
AP3S1-208ENST00000515066 NBPF7P0C2Y1 421 aaPredicted RBP21.17■□□□□ 0.98
AP3S1-208ENST00000515066 TRIM28Q13263 835 aaKnown RBP21.17■□□□□ 0.98
AP3S1-208ENST00000515066 C1orf115Q9H7X2 142 aa21.17■□□□□ 0.98
AP3S1-208ENST00000515066 SRP68Q9UHB9 627 aaKnown RBP21.17■□□□□ 0.98
AP3S1-208ENST00000515066 UTYO14607 1347 aa21.17■□□□□ 0.98
AP3S1-208ENST00000515066 USP42Q9H9J4 1324 aaKnown RBP21.17■□□□□ 0.98
AP3S1-208ENST00000515066 RGL2O15211 777 aa21.16■□□□□ 0.98
AP3S1-208ENST00000515066 TRAPPC3LQ5T215 181 aa21.16■□□□□ 0.98
AP3S1-208ENST00000515066 CHMP4BQ9H444 224 aaKnown RBP21.16■□□□□ 0.98
AP3S1-208ENST00000515066 UBN2Q6ZU65 1347 aa21.16■□□□□ 0.98
AP3S1-208ENST00000515066 GRM8O00222 908 aa21.15■□□□□ 0.98
AP3S1-208ENST00000515066 HSP90AB3PQ58FF7 597 aa21.15■□□□□ 0.98
AP3S1-208ENST00000515066 ZNF34Q8IZ26 560 aa21.15■□□□□ 0.98
AP3S1-208ENST00000515066 CCDC191Q8NCU4 936 aa21.15■□□□□ 0.98
AP3S1-208ENST00000515066 UPF1Q92900 1129 aaKnown RBP eCLIP21.15■□□□□ 0.98
AP3S1-208ENST00000515066 USPL1Q5W0Q7 1092 aa21.15■□□□□ 0.98
AP3S1-208ENST00000515066 CLEC4GQ6UXB4 293 aa21.15■□□□□ 0.98
AP3S1-208ENST00000515066 MYH3P11055 1940 aa21.14■□□□□ 0.97
AP3S1-208ENST00000515066 GNAI3P08754 354 aa21.14■□□□□ 0.97
AP3S1-208ENST00000515066 GPTP24298 496 aa21.14■□□□□ 0.97
AP3S1-208ENST00000515066 CWC25Q9NXE8 425 aaPredicted RBP21.14■□□□□ 0.97
AP3S1-208ENST00000515066 TFCP2L1Q9NZI6 479 aa21.14■□□□□ 0.97
AP3S1-208ENST00000515066 UBTFL1P0CB47 393 aaPredicted RBP21.13■□□□□ 0.97
AP3S1-208ENST00000515066 RFC4P35249 363 aa21.13■□□□□ 0.97
AP3S1-208ENST00000515066 B4GALNT3Q6L9W6 998 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms