RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PLBD2Q8NHP8 589 aa15.27■□□□□ 0.04
PDLIM5-220ENST00000514830 XAGE3Q8WTP9 111 aa15.27■□□□□ 0.04
PDLIM5-220ENST00000514830 API5Q9BZZ5 524 aaKnown RBP15.27■□□□□ 0.04
PDLIM5-220ENST00000514830 NOB1Q9ULX3 412 aaKnown RBP15.27■□□□□ 0.04
PDLIM5-220ENST00000514830 COL24A1Q17RW2 1714 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 ADCY9O60503 1353 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 MS4A1P11836 297 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 PIP4K2AP48426 406 aaPredicted RBP15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 TRAPPC3LQ5T215 181 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 ZKSCAN2Q63HK3 967 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 KSR2Q6VAB6 950 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 ATF7IPQ6VMQ6 1270 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 ANKRD13DQ6ZTN6 518 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 NPM2Q86SE8 214 aaKnown RBP15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 ANO8Q9HCE9 1232 aaPredicted RBP15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 STK32BQ9NY57 414 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 NARFQ9UHQ1 456 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 ATP10DQ9P241 1426 aa15.26■□□□□ 0.03
PDLIM5-220ENST00000514830 ABCC4O15439 1325 aa15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 RRP1P56182 461 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 KIF6Q6ZMV9 814 aa15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 TTLL7Q6ZT98 887 aa15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 AMIGO3Q86WK7 504 aa15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 DZIP3Q86Y13 1208 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 ARHGEF1Q92888 912 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 CASZ1Q86V15 1759 aa15.25■□□□□ 0.03
PDLIM5-220ENST00000514830 AFDNP55196 1824 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-220ENST00000514830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-220ENST00000514830 CAMTA2O94983 1202 aa15.24■□□□□ 0.03
PDLIM5-220ENST00000514830 TRIM27P14373 513 aa15.24■□□□□ 0.03
PDLIM5-220ENST00000514830 PDE3AQ14432 1141 aa15.24■□□□□ 0.03
PDLIM5-220ENST00000514830 TFCP2L1Q9NZI6 479 aa15.24■□□□□ 0.03
PDLIM5-220ENST00000514830 PNPLA7Q6ZV29 1317 aa15.23■□□□□ 0.03
PDLIM5-220ENST00000514830 USP42Q9H9J4 1324 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-220ENST00000514830 PI4KAP2A4QPH2 592 aa15.23■□□□□ 0.03
PDLIM5-220ENST00000514830 GIGYF2Q6Y7W6 1299 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-220ENST00000514830 PI4KAP1Q8N8J0 262 aa15.23■□□□□ 0.03
PDLIM5-220ENST00000514830 DNAAF4Q8WXU2 420 aa15.23■□□□□ 0.03
PDLIM5-220ENST00000514830 RFC4P35249 363 aa15.22■□□□□ 0.03
PDLIM5-220ENST00000514830 AIMP1Q12904 312 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-220ENST00000514830 TRIM28Q13263 835 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-220ENST00000514830 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
PDLIM5-220ENST00000514830 FRAT1Q92837 279 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-220ENST00000514830 METTL22Q9BUU2 404 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-220ENST00000514830 INTS3Q68E01 1043 aaKnown RBP15.21■□□□□ 0.03
PDLIM5-220ENST00000514830 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
PDLIM5-220ENST00000514830 COL23A1Q86Y22 540 aaPredicted RBP15.21■□□□□ 0.03
PDLIM5-220ENST00000514830 DZIP1LQ8IYY4 767 aaKnown RBP15.21■□□□□ 0.03
PDLIM5-220ENST00000514830 TBC1D2BQ9UPU7 963 aa15.21■□□□□ 0.03
PDLIM5-220ENST00000514830 ZNF652Q9Y2D9 606 aa15.21■□□□□ 0.03
PDLIM5-220ENST00000514830 MAP3K2Q9Y2U5 619 aa15.21■□□□□ 0.03
PDLIM5-220ENST00000514830 ZNF330Q9Y3S2 320 aaPredicted RBP15.21■□□□□ 0.03
PDLIM5-220ENST00000514830 SUPT16HQ9Y5B9 1047 aaKnown RBP15.21■□□□□ 0.03
PDLIM5-220ENST00000514830 ZPR1O75312 459 aa15.2■□□□□ 0.02
PDLIM5-220ENST00000514830 TCIRG1Q13488 830 aa15.2■□□□□ 0.02
PDLIM5-220ENST00000514830 LINS1Q8NG48 757 aa15.2■□□□□ 0.02
PDLIM5-220ENST00000514830 SLC16A10Q8TF71 515 aa15.2■□□□□ 0.02
PDLIM5-220ENST00000514830 ZBTB3Q9H5J0 574 aa15.2■□□□□ 0.02
PDLIM5-220ENST00000514830 ALDH1L1O75891 902 aa15.19■□□□□ 0.02
PDLIM5-220ENST00000514830 CCT4P50991 539 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-220ENST00000514830 BEND3Q5T5X7 828 aa15.19■□□□□ 0.02
PDLIM5-220ENST00000514830 ZNF34Q8IZ26 560 aa15.19■□□□□ 0.02
PDLIM5-220ENST00000514830 ISCA1Q9BUE6 129 aa15.19■□□□□ 0.02
PDLIM5-220ENST00000514830 BCL2L12Q9HB09 334 aa15.19■□□□□ 0.02
PDLIM5-220ENST00000514830 NRXN2Q9P2S2 1712 aa15.18■□□□□ 0.02
PDLIM5-220ENST00000514830 F6X3S4 739 aa15.18■□□□□ 0.02
PDLIM5-220ENST00000514830 PLIN1O60240 522 aa15.18■□□□□ 0.02
PDLIM5-220ENST00000514830 PHF14O94880 888 aa15.18■□□□□ 0.02
PDLIM5-220ENST00000514830 GYS1P13807 737 aa15.18■□□□□ 0.02
PDLIM5-220ENST00000514830 NEXNQ0ZGT2 675 aa15.18■□□□□ 0.02
PDLIM5-220ENST00000514830 HLFQ16534 295 aa15.18■□□□□ 0.02
PDLIM5-220ENST00000514830 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
PDLIM5-220ENST00000514830 LAMB2P55268 1798 aa15.18■□□□□ 0.02
PDLIM5-220ENST00000514830 RLBP1P12271 317 aa15.17■□□□□ 0.02
PDLIM5-220ENST00000514830 SMIM5Q71RC9 77 aa15.17■□□□□ 0.02
PDLIM5-220ENST00000514830 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
PDLIM5-220ENST00000514830 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
PDLIM5-220ENST00000514830 CCDC191Q8NCU4 936 aa15.17■□□□□ 0.02
PDLIM5-220ENST00000514830 SRP68Q9UHB9 627 aaKnown RBP15.17■□□□□ 0.02
PDLIM5-220ENST00000514830 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
PDLIM5-220ENST00000514830 PARP10Q53GL7 1025 aa15.16■□□□□ 0.02
PDLIM5-220ENST00000514830 SRCIN1Q9C0H9 1055 aa15.16■□□□□ 0.02
PDLIM5-220ENST00000514830 TNNQ9UQP3 1299 aa15.16■□□□□ 0.02
PDLIM5-220ENST00000514830 NEURL1BA8MQ27 555 aa15.15■□□□□ 0.02
PDLIM5-220ENST00000514830 TM4SF1P30408 202 aa15.15■□□□□ 0.02
PDLIM5-220ENST00000514830 TMEM57Q8N5G2 664 aa15.15■□□□□ 0.02
PDLIM5-220ENST00000514830 CLUAP1Q96AJ1 413 aa15.15■□□□□ 0.02
PDLIM5-220ENST00000514830 ARXQ96QS3 562 aa15.15■□□□□ 0.02
PDLIM5-220ENST00000514830 MYD88Q99836 296 aa15.15■□□□□ 0.02
PDLIM5-220ENST00000514830 UTYO14607 1347 aa15.15■□□□□ 0.02
PDLIM5-220ENST00000514830 MYH3P11055 1940 aa15.14■□□□□ 0.01
PDLIM5-220ENST00000514830 FKBP8Q14318 412 aa15.14■□□□□ 0.01
PDLIM5-220ENST00000514830 GCKRQ14397 625 aa15.14■□□□□ 0.01
PDLIM5-220ENST00000514830 MVPQ14764 893 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-220ENST00000514830 C20orf194Q5TEA3 1177 aa15.14■□□□□ 0.01
PDLIM5-220ENST00000514830 SLC4A10Q6U841 1118 aa15.14■□□□□ 0.01
PDLIM5-220ENST00000514830 PANK1Q8TE04 598 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms