RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 KCNH5Q8NCM2 988 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 TRMT1Q9NXH9 659 aaKnown RBP16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 KINO60870 393 aaKnown RBP16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 RIC3Q7Z5B4 369 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 FAM135BQ49AJ0 1406 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 ZNF165P49910 485 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 TPM4P67936 248 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 ANO6Q4KMQ2 910 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 CLIP2Q9UDT6 1046 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 NEXNQ0ZGT2 675 aa16.43■□□□□ 0.22
TSPAN17-208ENST00000514705 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
TSPAN17-208ENST00000514705 DNAAF4Q8WXU2 420 aa16.43■□□□□ 0.22
TSPAN17-208ENST00000514705 METP08581 1390 aa16.43■□□□□ 0.22
TSPAN17-208ENST00000514705 AGLP35573 1532 aa16.43■□□□□ 0.22
TSPAN17-208ENST00000514705 RIOK3O14730 519 aaKnown RBP16.43■□□□□ 0.22
TSPAN17-208ENST00000514705 PLEKHG1Q9ULL1 1385 aa16.43■□□□□ 0.22
TSPAN17-208ENST00000514705 FAM200AQ8TCP9 573 aa16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 PIK3R4Q99570 1358 aa16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 PRDM11Q9NQV5 511 aa16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 ECHDC1Q9NTX5 307 aa16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 PA2G4Q9UQ80 394 aaKnown RBP16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 SOS1Q07889 1333 aaPredicted RBP16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 SMAP1Q8IYB5 467 aaPredicted RBP16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 CUL4AQ13619 759 aa16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 NEUROD6Q96NK8 337 aa16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 SCAND2PQ9GZW5 306 aaPredicted RBP16.42■□□□□ 0.22
TSPAN17-208ENST00000514705 HSPA4P34932 840 aa16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 ME1P48163 572 aa16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 TYRO3Q06418 890 aa16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 SGSM2O43147 1006 aa16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 SMC2O95347 1197 aa16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 U2AF2P26368 475 aaKnown RBP eCLIP16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 V9GYY5 206 aaPredicted RBP16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 DDX58O95786 925 aaKnown RBP16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 ANKRD1Q15327 319 aa16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 ERC1Q8IUD2 1116 aa16.41■□□□□ 0.22
TSPAN17-208ENST00000514705 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 RASEFQ8IZ41 740 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 DNAJC25Q9H1X3 360 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 MYOM1P52179 1685 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 A2ML1A8K2U0 1454 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 EYA1Q99502 592 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 ZNF530Q6P9A1 599 aaPredicted RBP16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 STRN4Q9NRL3 753 aa16.4■□□□□ 0.22
TSPAN17-208ENST00000514705 HIP1O00291 1037 aa16.39■□□□□ 0.22
TSPAN17-208ENST00000514705 GUCY1B3Q02153 619 aa16.39■□□□□ 0.22
TSPAN17-208ENST00000514705 QRICH2Q9H0J4 1663 aa16.39■□□□□ 0.22
TSPAN17-208ENST00000514705 MAP3K19Q56UN5 1328 aa16.39■□□□□ 0.22
TSPAN17-208ENST00000514705 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
TSPAN17-208ENST00000514705 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
TSPAN17-208ENST00000514705 TULP4Q9NRJ4 1543 aa16.39■□□□□ 0.21
TSPAN17-208ENST00000514705 BTBD11A6QL63 1104 aa16.39■□□□□ 0.21
TSPAN17-208ENST00000514705 MEX3CQ5U5Q3 659 aaKnown RBP16.39■□□□□ 0.21
TSPAN17-208ENST00000514705 RAD50Q92878 1312 aa16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 PYCARDQ9ULZ3 195 aa16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 PPRC1Q5VV67 1664 aaKnown RBP16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 EDC4Q6P2E9 1401 aaKnown RBP16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 NBPF7P0C2Y1 421 aaPredicted RBP16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 RUFY3Q7L099 469 aa16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 LRRC2Q9BYS8 371 aa16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 USP44Q9H0E7 712 aa16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 PNPLA6Q8IY17 1366 aa16.38■□□□□ 0.21
TSPAN17-208ENST00000514705 MYL6BP14649 208 aa16.37■□□□□ 0.21
TSPAN17-208ENST00000514705 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
TSPAN17-208ENST00000514705 LRRC7Q96NW7 1537 aa16.37■□□□□ 0.21
TSPAN17-208ENST00000514705 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
TSPAN17-208ENST00000514705 NUTM2BA6NNL0 878 aaPredicted RBP16.37■□□□□ 0.21
TSPAN17-208ENST00000514705 NUTM2EB1AL46 878 aaPredicted RBP16.37■□□□□ 0.21
TSPAN17-208ENST00000514705 NUTM2AQ8IVF1 878 aaPredicted RBP16.37■□□□□ 0.21
TSPAN17-208ENST00000514705 DDX19AQ9NUU7 478 aaKnown RBP16.37■□□□□ 0.21
TSPAN17-208ENST00000514705 CGNQ9P2M7 1197 aaKnown RBP16.37■□□□□ 0.21
TSPAN17-208ENST00000514705 CPLX1O14810 134 aa16.36■□□□□ 0.21
TSPAN17-208ENST00000514705 LRMPQ12912 555 aa16.36■□□□□ 0.21
TSPAN17-208ENST00000514705 EVI5LQ96CN4 794 aa16.36■□□□□ 0.21
TSPAN17-208ENST00000514705 CFAP45Q9UL16 551 aa16.36■□□□□ 0.21
TSPAN17-208ENST00000514705 CAMSAP1Q5T5Y3 1602 aa16.36■□□□□ 0.21
TSPAN17-208ENST00000514705 PLEKHO1Q53GL0 409 aaPredicted RBP16.36■□□□□ 0.21
TSPAN17-208ENST00000514705 NAT10Q9H0A0 1025 aaKnown RBP16.35■□□□□ 0.21
TSPAN17-208ENST00000514705 MAP3K2Q9Y2U5 619 aa16.35■□□□□ 0.21
TSPAN17-208ENST00000514705 KIAA0232Q92628 1395 aa16.35■□□□□ 0.21
TSPAN17-208ENST00000514705 MED14O60244 1454 aa16.35■□□□□ 0.21
TSPAN17-208ENST00000514705 TOM1L2Q6ZVM7 507 aa16.35■□□□□ 0.21
TSPAN17-208ENST00000514705 FAM177A1Q8N128 213 aaPredicted RBP16.35■□□□□ 0.21
TSPAN17-208ENST00000514705 CLTCQ00610 1675 aaKnown RBP16.35■□□□□ 0.21
TSPAN17-208ENST00000514705 MNS1Q8NEH6 495 aa16.35■□□□□ 0.21
TSPAN17-208ENST00000514705 NPHP3Q7Z494 1330 aa16.34■□□□□ 0.21
TSPAN17-208ENST00000514705 LIG1P18858 919 aa16.34■□□□□ 0.21
TSPAN17-208ENST00000514705 PTH1RQ03431 593 aa16.34■□□□□ 0.21
TSPAN17-208ENST00000514705 NMIQ13287 307 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms