RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 PLBD2Q8NHP8 589 aa24.82■■□□□ 1.56
SSBP2-218ENST00000514493 MEIS3Q99687 375 aa24.82■■□□□ 1.56
SSBP2-218ENST00000514493 IBTKQ9P2D0 1353 aaPredicted RBP24.81■■□□□ 1.56
SSBP2-218ENST00000514493 SOCS7O14512 581 aa24.81■■□□□ 1.56
SSBP2-218ENST00000514493 TNS1Q9HBL0 1735 aaKnown RBP24.81■■□□□ 1.56
SSBP2-218ENST00000514493 CRKLP46109 303 aaKnown RBP24.8■■□□□ 1.56
SSBP2-218ENST00000514493 CCDC87Q9NVE4 849 aa24.8■■□□□ 1.56
SSBP2-218ENST00000514493 TTLL7Q6ZT98 887 aa24.8■■□□□ 1.56
SSBP2-218ENST00000514493 METTL22Q9BUU2 404 aaPredicted RBP24.8■■□□□ 1.56
SSBP2-218ENST00000514493 NUP98P52948 1817 aa24.79■■□□□ 1.56
SSBP2-218ENST00000514493 ALDH1L1O75891 902 aa24.79■■□□□ 1.56
SSBP2-218ENST00000514493 IL6STP40189 918 aaPredicted RBP24.79■■□□□ 1.56
SSBP2-218ENST00000514493 LINS1Q8NG48 757 aa24.79■■□□□ 1.56
SSBP2-218ENST00000514493 C1orf115Q9H7X2 142 aa24.79■■□□□ 1.56
SSBP2-218ENST00000514493 BCORQ6W2J9 1755 aa24.78■■□□□ 1.56
SSBP2-218ENST00000514493 INTS5Q6P9B9 1019 aaKnown RBP24.78■■□□□ 1.56
SSBP2-218ENST00000514493 IGHDP01880 384 aa24.77■■□□□ 1.56
SSBP2-218ENST00000514493 GNAI3P08754 354 aa24.77■■□□□ 1.56
SSBP2-218ENST00000514493 NEXNQ0ZGT2 675 aa24.77■■□□□ 1.56
SSBP2-218ENST00000514493 ZNF330Q9Y3S2 320 aaPredicted RBP24.77■■□□□ 1.56
SSBP2-218ENST00000514493 C4BP0C0L5 1744 aa24.77■■□□□ 1.56
SSBP2-218ENST00000514493 CNTNAP4Q9C0A0 1308 aa24.77■■□□□ 1.56
SSBP2-218ENST00000514493 LINC00116Q8NCU8 138 aa24.77■■□□□ 1.56
SSBP2-218ENST00000514493 CCNL1Q9UK58 526 aaPredicted RBP24.77■■□□□ 1.56
SSBP2-218ENST00000514493 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
SSBP2-218ENST00000514493 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
SSBP2-218ENST00000514493 DEFB132Q7Z7B7 95 aa24.76■■□□□ 1.55
SSBP2-218ENST00000514493 USP44Q9H0E7 712 aa24.76■■□□□ 1.55
SSBP2-218ENST00000514493 HDAC1Q13547 482 aaPredicted RBP24.75■■□□□ 1.55
SSBP2-218ENST00000514493 KIF6Q6ZMV9 814 aa24.75■■□□□ 1.55
SSBP2-218ENST00000514493 RWDD1Q9H446 243 aaPredicted RBP24.75■■□□□ 1.55
SSBP2-218ENST00000514493 IGKV5-2P06315 115 aa24.75■■□□□ 1.55
SSBP2-218ENST00000514493 CWF19L2Q2TBE0 894 aaKnown RBP24.75■■□□□ 1.55
SSBP2-218ENST00000514493 MYD88Q99836 296 aa24.75■■□□□ 1.55
SSBP2-218ENST00000514493 EIF5P55010 431 aaKnown RBP24.74■■□□□ 1.55
SSBP2-218ENST00000514493 ZBTB3Q9H5J0 574 aa24.74■■□□□ 1.55
SSBP2-218ENST00000514493 NEURL1BA8MQ27 555 aa24.73■■□□□ 1.55
SSBP2-218ENST00000514493 MAP3K15Q6ZN16 1313 aa24.73■■□□□ 1.55
SSBP2-218ENST00000514493 SCN7AQ01118 1682 aa24.73■■□□□ 1.55
SSBP2-218ENST00000514493 APBA3O96018 575 aa24.72■■□□□ 1.55
SSBP2-218ENST00000514493 GNAI2P04899 355 aa24.72■■□□□ 1.55
SSBP2-218ENST00000514493 UBTFL1P0CB47 393 aaPredicted RBP24.72■■□□□ 1.55
SSBP2-218ENST00000514493 KCNQ4P56696 695 aa24.72■■□□□ 1.55
SSBP2-218ENST00000514493 COL15A1P39059 1388 aa24.71■■□□□ 1.55
SSBP2-218ENST00000514493 NPM2Q86SE8 214 aaKnown RBP24.71■■□□□ 1.55
SSBP2-218ENST00000514493 EN1Q05925 392 aaPredicted RBP24.7■■□□□ 1.55
SSBP2-218ENST00000514493 RC3H1Q5TC82 1133 aaKnown RBP24.7■■□□□ 1.55
SSBP2-218ENST00000514493 CEP85Q6P2H3 762 aa24.7■■□□□ 1.55
SSBP2-218ENST00000514493 UBR3Q6ZT12 1888 aa24.7■■□□□ 1.54
SSBP2-218ENST00000514493 UTYO14607 1347 aa24.7■■□□□ 1.54
SSBP2-218ENST00000514493 DZIP3Q86Y13 1208 aaKnown RBP24.7■■□□□ 1.54
SSBP2-218ENST00000514493 C4AP0C0L4 1744 aa24.69■■□□□ 1.54
SSBP2-218ENST00000514493 GRM8O00222 908 aa24.69■■□□□ 1.54
SSBP2-218ENST00000514493 CCDC125Q86Z20 511 aa24.69■■□□□ 1.54
SSBP2-218ENST00000514493 SIRT2Q8IXJ6 389 aa24.69■■□□□ 1.54
SSBP2-218ENST00000514493 ANKRD44Q8N8A2 993 aa24.69■■□□□ 1.54
SSBP2-218ENST00000514493 NBPF7P0C2Y1 421 aaPredicted RBP24.68■■□□□ 1.54
SSBP2-218ENST00000514493 SF3B2Q13435 895 aaKnown RBP24.68■■□□□ 1.54
SSBP2-218ENST00000514493 GCKRQ14397 625 aa24.68■■□□□ 1.54
SSBP2-218ENST00000514493 SLC27A3Q5K4L6 730 aa24.68■■□□□ 1.54
SSBP2-218ENST00000514493 RPAP2Q8IXW5 612 aaPredicted RBP24.68■■□□□ 1.54
SSBP2-218ENST00000514493 C9orf78Q9NZ63 289 aaPredicted RBP24.68■■□□□ 1.54
SSBP2-218ENST00000514493 ERVV-1B6SEH8 477 aa24.67■■□□□ 1.54
SSBP2-218ENST00000514493 GIGYF2Q6Y7W6 1299 aaKnown RBP24.67■■□□□ 1.54
SSBP2-218ENST00000514493 LRRFIP2Q9Y608 721 aaKnown RBP24.67■■□□□ 1.54
SSBP2-218ENST00000514493 ATP5J2-PTCD1G3V325 749 aa24.66■■□□□ 1.54
SSBP2-218ENST00000514493 EZH2Q15910 746 aaKnown RBP24.66■■□□□ 1.54
SSBP2-218ENST00000514493 LRRC4BQ9NT99 713 aa24.66■■□□□ 1.54
SSBP2-218ENST00000514493 TCIRG1Q13488 830 aa24.65■■□□□ 1.54
SSBP2-218ENST00000514493 HSP90AB3PQ58FF7 597 aa24.65■■□□□ 1.54
SSBP2-218ENST00000514493 ARXQ96QS3 562 aa24.65■■□□□ 1.54
SSBP2-218ENST00000514493 ISCA1Q9BUE6 129 aa24.65■■□□□ 1.54
SSBP2-218ENST00000514493 TBC1D2BQ9UPU7 963 aa24.65■■□□□ 1.54
SSBP2-218ENST00000514493 HDAC5Q9UQL6 1122 aa24.65■■□□□ 1.54
SSBP2-218ENST00000514493 CCDC191Q8NCU4 936 aa24.65■■□□□ 1.54
SSBP2-218ENST00000514493 A0A087WZG4 1122 aa24.64■■□□□ 1.53
SSBP2-218ENST00000514493 PLSCR1O15162 318 aa24.64■■□□□ 1.53
SSBP2-218ENST00000514493 HLFQ16534 295 aa24.64■■□□□ 1.53
SSBP2-218ENST00000514493 PROM2Q8N271 834 aa24.64■■□□□ 1.53
SSBP2-218ENST00000514493 CAMKK2Q96RR4 588 aa24.64■■□□□ 1.53
SSBP2-218ENST00000514493 TSHZ2Q9NRE2 1034 aa24.64■■□□□ 1.53
SSBP2-218ENST00000514493 CWC25Q9NXE8 425 aaPredicted RBP24.64■■□□□ 1.53
SSBP2-218ENST00000514493 RPS6KA4O75676 772 aa24.63■■□□□ 1.53
SSBP2-218ENST00000514493 SMC5Q8IY18 1101 aa24.63■■□□□ 1.53
SSBP2-218ENST00000514493 GNPATO15228 680 aa24.62■■□□□ 1.53
SSBP2-218ENST00000514493 CAMTA2O94983 1202 aa24.62■■□□□ 1.53
SSBP2-218ENST00000514493 BAG6P46379 1132 aa24.62■■□□□ 1.53
SSBP2-218ENST00000514493 TRIM28Q13263 835 aaKnown RBP24.62■■□□□ 1.53
SSBP2-218ENST00000514493 HMMRO75330 724 aa24.61■■□□□ 1.53
SSBP2-218ENST00000514493 SKAP1Q86WV1 359 aa24.61■■□□□ 1.53
SSBP2-218ENST00000514493 TXNRD1Q16881 649 aa24.6■■□□□ 1.53
SSBP2-218ENST00000514493 SUCLG2Q96I99 432 aa24.6■■□□□ 1.53
SSBP2-218ENST00000514493 MYH3P11055 1940 aa24.6■■□□□ 1.53
SSBP2-218ENST00000514493 TUBGCP6Q96RT7 1819 aa24.6■■□□□ 1.53
SSBP2-218ENST00000514493 HMGB2P26583 209 aaKnown RBP24.59■■□□□ 1.53
SSBP2-218ENST00000514493 ATP8B2P98198 1209 aa24.59■■□□□ 1.53
SSBP2-218ENST00000514493 AK7Q96M32 723 aa24.59■■□□□ 1.53
SSBP2-218ENST00000514493 RTCBQ9Y3I0 505 aaKnown RBP24.59■■□□□ 1.53
SSBP2-218ENST00000514493 CASP7P55210 303 aa24.59■■□□□ 1.53
SSBP2-218ENST00000514493 UBE3BQ7Z3V4 1068 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 2398.3 ms