RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 BRPF3Q9ULD4 1205 aa6.04□□□□□ -1.44
SGCB-203ENST00000514133 ZC3H6P61129 1189 aaKnown RBP6.03□□□□□ -1.44
SGCB-203ENST00000514133 TRIM22Q8IYM9 498 aa6.03□□□□□ -1.44
SGCB-203ENST00000514133 CNKSR1Q969H4 720 aa6.03□□□□□ -1.44
SGCB-203ENST00000514133 DRC1Q96MC2 740 aa6.03□□□□□ -1.44
SGCB-203ENST00000514133 C8orf37Q96NL8 207 aa6.03□□□□□ -1.44
SGCB-203ENST00000514133 RBCK1Q9BYM8 510 aa6.03□□□□□ -1.44
SGCB-203ENST00000514133 BACH2Q9BYV9 841 aa6.03□□□□□ -1.44
SGCB-203ENST00000514133 TSPAN10Q9H1Z9 355 aaPredicted RBP6.03□□□□□ -1.44
SGCB-203ENST00000514133 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.03□□□□□ -1.44
SGCB-203ENST00000514133 NPR3P17342 541 aa6.02□□□□□ -1.45
SGCB-203ENST00000514133 SCNN1DP51172 638 aa6.02□□□□□ -1.45
SGCB-203ENST00000514133 C16orf46Q6P387 395 aa6.02□□□□□ -1.45
SGCB-203ENST00000514133 PRICKLE2Q7Z3G6 844 aa6.02□□□□□ -1.45
SGCB-203ENST00000514133 SAP130Q9H0E3 1048 aa6.02□□□□□ -1.45
SGCB-203ENST00000514133 PPP1R1BQ9UD71 204 aaPredicted RBP6.02□□□□□ -1.45
SGCB-203ENST00000514133 HRH3Q9Y5N1 445 aa6.02□□□□□ -1.45
SGCB-203ENST00000514133 PPP1R12BO60237 982 aaPredicted RBP6.01□□□□□ -1.45
SGCB-203ENST00000514133 INHAP05111 366 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 SLURP2P0DP57 97 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
SGCB-203ENST00000514133 ERCC5P28715 1186 aaPredicted RBP6.01□□□□□ -1.45
SGCB-203ENST00000514133 MAPK8P45983 427 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 XPCQ01831 940 aaPredicted RBP6.01□□□□□ -1.45
SGCB-203ENST00000514133 NAALADL2Q58DX5 795 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 GNASQ5JWF2 1037 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 TBCELQ5QJ74 424 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 NBPF10Q6P3W6 841 aaKnown RBP6.01□□□□□ -1.45
SGCB-203ENST00000514133 VWA5B2Q8N398 1253 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 NBPF15Q8N660 670 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 SREK1Q8WXA9 508 aaKnown RBP6.01□□□□□ -1.45
SGCB-203ENST00000514133 ARHGEF10LQ9HCE6 1279 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 LRRC4BQ9NT99 713 aa6.01□□□□□ -1.45
SGCB-203ENST00000514133 A0A1B0GTH6 734 aa6□□□□□ -1.45
SGCB-203ENST00000514133 F11P03951 625 aa6□□□□□ -1.45
SGCB-203ENST00000514133 EIF1AXP47813 144 aaKnown RBP6□□□□□ -1.45
SGCB-203ENST00000514133 PLCB3Q01970 1234 aa6□□□□□ -1.45
SGCB-203ENST00000514133 CENPCQ03188 943 aa6□□□□□ -1.45
SGCB-203ENST00000514133 SRSF11Q05519 484 aaKnown RBP6□□□□□ -1.45
SGCB-203ENST00000514133 C9orf131Q5VYM1 1079 aa6□□□□□ -1.45
SGCB-203ENST00000514133 TRERF1Q96PN7 1200 aa6□□□□□ -1.45
SGCB-203ENST00000514133 ZSCAN10Q96SZ4 725 aaPredicted RBP6□□□□□ -1.45
SGCB-203ENST00000514133 COL25A1Q9BXS0 654 aaPredicted RBP6□□□□□ -1.45
SGCB-203ENST00000514133 ETNK1Q9HBU6 452 aa6□□□□□ -1.45
SGCB-203ENST00000514133 CCDC87Q9NVE4 849 aa6□□□□□ -1.45
SGCB-203ENST00000514133 NSFL1CQ9UNZ2 370 aaKnown RBP6□□□□□ -1.45
SGCB-203ENST00000514133 CDC14CA4D256 554 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 RNF225M0QZC1 329 aaPredicted RBP5.99□□□□□ -1.45
SGCB-203ENST00000514133 TREHO43280 583 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 IL2RAP01589 272 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 LDHBP07195 334 aaKnown RBP5.99□□□□□ -1.45
SGCB-203ENST00000514133 EPHA4P54764 986 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 MRPL58Q14197 206 aaKnown RBP5.99□□□□□ -1.45
SGCB-203ENST00000514133 COX20Q5RI15 118 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 ALKBH2Q6NS38 261 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 PPARGC1BQ86YN6 1023 aaKnown RBP5.99□□□□□ -1.45
SGCB-203ENST00000514133 GPR161Q8N6U8 529 aaKnown RBP5.99□□□□□ -1.45
SGCB-203ENST00000514133 FAM161BQ96MY7 647 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 CITED4Q96RK1 184 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 MRS2Q9HD23 443 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 TIMMDC1Q9NPL8 285 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 STIM2Q9P246 746 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 PHF24Q9UPV7 400 aa5.99□□□□□ -1.45
SGCB-203ENST00000514133 SCAMP3O14828 347 aaKnown RBP5.98□□□□□ -1.45
SGCB-203ENST00000514133 FMR1Q06787 632 aaKnown RBP eCLIP5.98□□□□□ -1.45
SGCB-203ENST00000514133 EHHADHQ08426 723 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 POU4F2Q12837 409 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 TMEM214Q6NUQ4 689 aaKnown RBP5.98□□□□□ -1.45
SGCB-203ENST00000514133 SLC9A9Q8IVB4 645 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 TMEM87AQ8NBN3 555 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 RHBDD1Q8TEB9 315 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 DMRTB1Q96MA1 342 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 CNTNAP3BQ96NU0 1288 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 CFHR5Q9BXR6 569 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 CNTNAP3Q9BZ76 1288 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 FHDC1Q9C0D6 1143 aaPredicted RBP5.98□□□□□ -1.45
SGCB-203ENST00000514133 ENAMQ9NRM1 1142 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 RAB6BQ9NRW1 208 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 PARP2Q9UGN5 583 aa5.98□□□□□ -1.45
SGCB-203ENST00000514133 A6NJY4 79 aa5.97□□□□□ -1.45
SGCB-203ENST00000514133 FZD6O60353 706 aa5.97□□□□□ -1.45
SGCB-203ENST00000514133 HMGB1P09429 215 aaKnown RBP5.97□□□□□ -1.45
SGCB-203ENST00000514133 FGD1P98174 961 aa5.97□□□□□ -1.45
SGCB-203ENST00000514133 HDLBPQ00341 1268 aaKnown RBP5.97□□□□□ -1.45
SGCB-203ENST00000514133 ZNF837Q96EG3 531 aaPredicted RBP5.97□□□□□ -1.45
SGCB-203ENST00000514133 NGLY1Q96IV0 654 aa5.97□□□□□ -1.45
SGCB-203ENST00000514133 SLC4A9Q96Q91 983 aa5.97□□□□□ -1.45
SGCB-203ENST00000514133 DUSP9Q99956 384 aaKnown RBP5.97□□□□□ -1.45
SGCB-203ENST00000514133 C2orf49Q9BVC5 232 aaPredicted RBP5.97□□□□□ -1.45
SGCB-203ENST00000514133 MBIPQ9NS73 344 aa5.97□□□□□ -1.45
SGCB-203ENST00000514133 SCHIP1Q9P0W5 487 aaPredicted RBP5.97□□□□□ -1.45
SGCB-203ENST00000514133 CHMP3Q9Y3E7 222 aa5.97□□□□□ -1.45
SGCB-203ENST00000514133 TNFRSF10BO14763 440 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 PRPF40AO75400 957 aaKnown RBP5.96□□□□□ -1.46
SGCB-203ENST00000514133 SMTNP53814 917 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 FOXK2Q01167 660 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 ATP2B2Q01814 1243 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 PDE3BQ13370 1112 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 DSC3Q14574 896 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 SF3A1Q15459 793 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms