RNA–Protein interactions for RNA: ENST00000514030.1

SNX2-212, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-212ENST00000514030 SLC9A9Q8IVB4 645 aa8.98□□□□□ -0.97
SNX2-212ENST00000514030 RHPN1Q8TCX5 695 aa8.98□□□□□ -0.97
SNX2-212ENST00000514030 STRN4Q9NRL3 753 aa8.98□□□□□ -0.97
SNX2-212ENST00000514030 SERTM1A2A2V5 107 aa8.97□□□□□ -0.97
SNX2-212ENST00000514030 DOC2BQ14184 412 aa8.97□□□□□ -0.97
SNX2-212ENST00000514030 ZDHHC1Q8WTX9 485 aa8.97□□□□□ -0.97
SNX2-212ENST00000514030 SEMA6BQ9H3T3 888 aa8.97□□□□□ -0.97
SNX2-212ENST00000514030 COG6Q9Y2V7 657 aa8.97□□□□□ -0.97
SNX2-212ENST00000514030 USP17L5A8MUK1 530 aa8.96□□□□□ -0.98
SNX2-212ENST00000514030 EML1O00423 815 aa8.96□□□□□ -0.98
SNX2-212ENST00000514030 ATP1A2P50993 1020 aa8.96□□□□□ -0.98
SNX2-212ENST00000514030 ADARB2-AS1A8MUL3 147 aa8.95□□□□□ -0.98
SNX2-212ENST00000514030 RAD21O60216 631 aa8.95□□□□□ -0.98
SNX2-212ENST00000514030 NACC1Q96RE7 527 aa8.95□□□□□ -0.98
SNX2-212ENST00000514030 ALG2Q9H553 416 aa8.95□□□□□ -0.98
SNX2-212ENST00000514030 EPHA4P54764 986 aa8.94□□□□□ -0.98
SNX2-212ENST00000514030 PSMA6P60900 246 aaKnown RBP8.94□□□□□ -0.98
SNX2-212ENST00000514030 TNFRSF25Q93038 417 aa8.94□□□□□ -0.98
SNX2-212ENST00000514030 ANKIB1Q9P2G1 1089 aa8.94□□□□□ -0.98
SNX2-212ENST00000514030 M0R082 166 aa8.93□□□□□ -0.98
SNX2-212ENST00000514030 TNS4Q8IZW8 715 aa8.93□□□□□ -0.98
SNX2-212ENST00000514030 DEPDC4Q8N2C3 294 aa8.93□□□□□ -0.98
SNX2-212ENST00000514030 ZNF417Q8TAU3 575 aa8.93□□□□□ -0.98
SNX2-212ENST00000514030 ZNF587Q96SQ5 575 aaPredicted RBP8.93□□□□□ -0.98
SNX2-212ENST00000514030 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
SNX2-212ENST00000514030 TBCELQ5QJ74 424 aa8.92□□□□□ -0.98
SNX2-212ENST00000514030 TPCN2Q8NHX9 752 aa8.92□□□□□ -0.98
SNX2-212ENST00000514030 RBM19Q9Y4C8 960 aaKnown RBP8.92□□□□□ -0.98
SNX2-212ENST00000514030 ADH7P40394 386 aa8.91□□□□□ -0.98
SNX2-212ENST00000514030 SFSWAPQ12872 951 aaKnown RBP8.91□□□□□ -0.98
SNX2-212ENST00000514030 TRIM28Q13263 835 aaKnown RBP8.91□□□□□ -0.98
SNX2-212ENST00000514030 ZMYM1Q5SVZ6 1142 aa8.91□□□□□ -0.98
SNX2-212ENST00000514030 C1orf53Q5VUE5 145 aa8.91□□□□□ -0.98
SNX2-212ENST00000514030 CEP63Q96MT8 703 aa8.91□□□□□ -0.98
SNX2-212ENST00000514030 MDFIQ99750 246 aa8.91□□□□□ -0.98
SNX2-212ENST00000514030 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
SNX2-212ENST00000514030 PRDM6Q9NQX0 595 aa8.91□□□□□ -0.98
SNX2-212ENST00000514030 CCDC102BQ68D86 513 aa8.9□□□□□ -0.98
SNX2-212ENST00000514030 SLC30A3Q99726 388 aa8.9□□□□□ -0.98
SNX2-212ENST00000514030 PLEKHM2Q8IWE5 1019 aa8.89□□□□□ -0.99
SNX2-212ENST00000514030 USP17L3A6NCW0 530 aa8.88□□□□□ -0.99
SNX2-212ENST00000514030 USP17L4A6NCW7 530 aa8.88□□□□□ -0.99
SNX2-212ENST00000514030 ALBP02768 609 aa8.88□□□□□ -0.99
SNX2-212ENST00000514030 HIRAP54198 1017 aaPredicted RBP8.88□□□□□ -0.99
SNX2-212ENST00000514030 HIF1AQ16665 826 aa8.88□□□□□ -0.99
SNX2-212ENST00000514030 USP17L2Q6R6M4 530 aa8.88□□□□□ -0.99
SNX2-212ENST00000514030 USP17L1Q7RTZ2 530 aa8.88□□□□□ -0.99
SNX2-212ENST00000514030 TSPAN10Q9H1Z9 355 aaPredicted RBP8.88□□□□□ -0.99
SNX2-212ENST00000514030 KCNH4Q9UQ05 1017 aa8.88□□□□□ -0.99
SNX2-212ENST00000514030 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
SNX2-212ENST00000514030 M0R2N6 131 aa8.87□□□□□ -0.99
SNX2-212ENST00000514030 SH3PXD2AQ5TCZ1 1133 aa8.87□□□□□ -0.99
SNX2-212ENST00000514030 RAB44Q7Z6P3 723 aaPredicted RBP8.87□□□□□ -0.99
SNX2-212ENST00000514030 MICALL1Q8N3F8 863 aa8.87□□□□□ -0.99
SNX2-212ENST00000514030 HSH2DQ96JZ2 352 aa8.87□□□□□ -0.99
SNX2-212ENST00000514030 PHACTR1Q9C0D0 580 aa8.87□□□□□ -0.99
SNX2-212ENST00000514030 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
SNX2-212ENST00000514030 KCNQ4P56696 695 aa8.86□□□□□ -0.99
SNX2-212ENST00000514030 RSPO4Q2I0M5 234 aaPredicted RBP8.86□□□□□ -0.99
SNX2-212ENST00000514030 LARGE2Q8N3Y3 721 aa8.86□□□□□ -0.99
SNX2-212ENST00000514030 TPSG1Q9NRR2 321 aa8.86□□□□□ -0.99
SNX2-212ENST00000514030 KIAA1024Q9UPX6 916 aa8.86□□□□□ -0.99
SNX2-212ENST00000514030 HCN4Q9Y3Q4 1203 aa8.86□□□□□ -0.99
SNX2-212ENST00000514030 PALM3A6NDB9 673 aaPredicted RBP8.85□□□□□ -0.99
SNX2-212ENST00000514030 SFI1A8K8P3 1242 aa8.85□□□□□ -0.99
SNX2-212ENST00000514030 LILRB5O75023 590 aa8.85□□□□□ -0.99
SNX2-212ENST00000514030 UBTFP17480 764 aaKnown RBP8.85□□□□□ -0.99
SNX2-212ENST00000514030 ITGB7P26010 798 aa8.85□□□□□ -0.99
SNX2-212ENST00000514030 TYRO3Q06418 890 aa8.85□□□□□ -0.99
SNX2-212ENST00000514030 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
SNX2-212ENST00000514030 BHMTQ93088 406 aa8.85□□□□□ -0.99
SNX2-212ENST00000514030 STARD13Q9Y3M8 1113 aa8.85□□□□□ -0.99
SNX2-212ENST00000514030 ATP9BO43861 1147 aa8.84□□□□□ -0.99
SNX2-212ENST00000514030 PPP1R12BO60237 982 aaPredicted RBP8.84□□□□□ -0.99
SNX2-212ENST00000514030 NID1P14543 1247 aa8.84□□□□□ -0.99
SNX2-212ENST00000514030 CLDN10P78369 228 aa8.84□□□□□ -0.99
SNX2-212ENST00000514030 TBC1D8BQ0IIM8 1120 aa8.84□□□□□ -0.99
SNX2-212ENST00000514030 TRAPPC3LQ5T215 181 aa8.84□□□□□ -0.99
SNX2-212ENST00000514030 C7orf43Q8WVR3 580 aa8.84□□□□□ -0.99
SNX2-212ENST00000514030 POM121Q96HA1 1249 aa8.84□□□□□ -0.99
SNX2-212ENST00000514030 SUSD3Q96L08 255 aa8.84□□□□□ -0.99
SNX2-212ENST00000514030 UBE2OQ9C0C9 1292 aaKnown RBP8.84□□□□□ -0.99
SNX2-212ENST00000514030 C9orf172C9J069 976 aa8.83□□□□□ -1
SNX2-212ENST00000514030 DYRK3O43781 588 aa8.83□□□□□ -1
SNX2-212ENST00000514030 FLIIQ13045 1269 aa8.83□□□□□ -1
SNX2-212ENST00000514030 NKAPLQ5M9Q1 402 aa8.83□□□□□ -1
SNX2-212ENST00000514030 POTEAQ6S8J7 498 aa8.83□□□□□ -1
SNX2-212ENST00000514030 C8orf86Q6ZUL3 223 aa8.83□□□□□ -1
SNX2-212ENST00000514030 EFCC1Q9HA90 598 aa8.83□□□□□ -1
SNX2-212ENST00000514030 ZBTB7BO15156 539 aaPredicted RBP8.82□□□□□ -1
SNX2-212ENST00000514030 RAC1P63000 192 aa8.82□□□□□ -1
SNX2-212ENST00000514030 COL9A3Q14050 684 aaPredicted RBP8.82□□□□□ -1
SNX2-212ENST00000514030 SIX5Q8N196 739 aa8.82□□□□□ -1
SNX2-212ENST00000514030 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
SNX2-212ENST00000514030 GRIK4Q16099 956 aa8.81□□□□□ -1
SNX2-212ENST00000514030 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
SNX2-212ENST00000514030 ZNF594Q96JF6 807 aaPredicted RBP8.81□□□□□ -1
SNX2-212ENST00000514030 PNMA5Q96PV4 448 aa8.81□□□□□ -1
SNX2-212ENST00000514030 KRTAP4-8Q9BYQ9 185 aa8.81□□□□□ -1
SNX2-212ENST00000514030 POM121CA8CG34 1229 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms