RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
VCAN-211ENST00000513984 BCL9O00512 1426 aa18.45■□□□□ 0.54
VCAN-211ENST00000513984 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
VCAN-211ENST00000513984 ADAMTS2O95450 1211 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 RBM25P49756 843 aaKnown RBP18.44■□□□□ 0.54
VCAN-211ENST00000513984 KAZALD1Q96I82 304 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 SUCLG2Q96I99 432 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 DAXXQ9UER7 740 aaPredicted RBP18.44■□□□□ 0.54
VCAN-211ENST00000513984 STAP2Q9UGK3 403 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 COL15A1P39059 1388 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 EXOC5O00471 708 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 SDSP20132 328 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 MX1P20591 662 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 VSIG10Q8N0Z9 540 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 PIGBQ92521 554 aa18.44■□□□□ 0.54
VCAN-211ENST00000513984 AOX1Q06278 1338 aa18.43■□□□□ 0.54
VCAN-211ENST00000513984 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
VCAN-211ENST00000513984 RHPN1Q8TCX5 695 aa18.43■□□□□ 0.54
VCAN-211ENST00000513984 KIF1BPQ96EK5 621 aa18.43■□□□□ 0.54
VCAN-211ENST00000513984 BECN1Q14457 450 aa18.42■□□□□ 0.54
VCAN-211ENST00000513984 SLC4A3P48751 1232 aa18.42■□□□□ 0.54
VCAN-211ENST00000513984 A1BGP04217 495 aa18.41■□□□□ 0.54
VCAN-211ENST00000513984 TEX13AQ9BXU3 409 aaPredicted RBP18.41■□□□□ 0.54
VCAN-211ENST00000513984 BICC1Q9H694 974 aaKnown RBP18.41■□□□□ 0.54
VCAN-211ENST00000513984 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
VCAN-211ENST00000513984 ASAP1Q9ULH1 1129 aa18.41■□□□□ 0.54
VCAN-211ENST00000513984 IL1RAPL2Q9NP60 686 aa18.4■□□□□ 0.54
VCAN-211ENST00000513984 SPATA31A5Q5VU36 1347 aa18.39■□□□□ 0.54
VCAN-211ENST00000513984 SPATA31A7Q8IWB4 1347 aa18.39■□□□□ 0.54
VCAN-211ENST00000513984 NUTM2BA6NNL0 878 aaPredicted RBP18.38■□□□□ 0.53
VCAN-211ENST00000513984 NUTM2EB1AL46 878 aaPredicted RBP18.38■□□□□ 0.53
VCAN-211ENST00000513984 CASC1Q6TDU7 716 aa18.38■□□□□ 0.53
VCAN-211ENST00000513984 TTLL7Q6ZT98 887 aa18.38■□□□□ 0.53
VCAN-211ENST00000513984 ERC1Q8IUD2 1116 aa18.38■□□□□ 0.53
VCAN-211ENST00000513984 NUTM2AQ8IVF1 878 aaPredicted RBP18.38■□□□□ 0.53
VCAN-211ENST00000513984 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
VCAN-211ENST00000513984 UBAP1LF5GYI3 381 aa18.37■□□□□ 0.53
VCAN-211ENST00000513984 ANKRD36CQ5JPF3 1778 aa18.37■□□□□ 0.53
VCAN-211ENST00000513984 CASP7P55210 303 aa18.37■□□□□ 0.53
VCAN-211ENST00000513984 TSHZ3Q63HK5 1081 aa18.37■□□□□ 0.53
VCAN-211ENST00000513984 BARGINQ6ZT62 677 aa18.37■□□□□ 0.53
VCAN-211ENST00000513984 USP42Q9H9J4 1324 aaKnown RBP18.37■□□□□ 0.53
VCAN-211ENST00000513984 OS9Q13438 667 aaPredicted RBP18.36■□□□□ 0.53
VCAN-211ENST00000513984 DDB1Q16531 1140 aa18.36■□□□□ 0.53
VCAN-211ENST00000513984 DNAJC10Q8IXB1 793 aa18.36■□□□□ 0.53
VCAN-211ENST00000513984 ATP5J2-PTCD1G3V325 749 aa18.35■□□□□ 0.53
VCAN-211ENST00000513984 RABL6Q3YEC7 729 aaPredicted RBP18.35■□□□□ 0.53
VCAN-211ENST00000513984 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
VCAN-211ENST00000513984 PA2G4Q9UQ80 394 aaKnown RBP18.35■□□□□ 0.53
VCAN-211ENST00000513984 JCADQ9P266 1359 aa18.35■□□□□ 0.53
VCAN-211ENST00000513984 A0A087WZG4 1122 aa18.35■□□□□ 0.53
VCAN-211ENST00000513984 STARD3NLO95772 234 aa18.35■□□□□ 0.53
VCAN-211ENST00000513984 EPHA10Q5JZY3 1008 aa18.35■□□□□ 0.53
VCAN-211ENST00000513984 UBE3BQ7Z3V4 1068 aa18.35■□□□□ 0.53
VCAN-211ENST00000513984 NUTM1Q86Y26 1132 aa18.35■□□□□ 0.53
VCAN-211ENST00000513984 PI4K2BQ8TCG2 481 aa18.34■□□□□ 0.53
VCAN-211ENST00000513984 TTC41PQ6P2S7 1318 aa18.33■□□□□ 0.53
VCAN-211ENST00000513984 NUP98P52948 1817 aa18.33■□□□□ 0.53
VCAN-211ENST00000513984 H7C1W4 665 aa18.33■□□□□ 0.53
VCAN-211ENST00000513984 CLASRPQ8N2M8 674 aaKnown RBP18.33■□□□□ 0.53
VCAN-211ENST00000513984 KIF2CQ99661 725 aa18.33■□□□□ 0.53
VCAN-211ENST00000513984 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.53
VCAN-211ENST00000513984 CWC25Q9NXE8 425 aaPredicted RBP18.33■□□□□ 0.53
VCAN-211ENST00000513984 RREB1Q92766 1687 aa18.33■□□□□ 0.52
VCAN-211ENST00000513984 CCDC191Q8NCU4 936 aa18.33■□□□□ 0.52
VCAN-211ENST00000513984 SLC4A9Q96Q91 983 aa18.33■□□□□ 0.52
VCAN-211ENST00000513984 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.52
VCAN-211ENST00000513984 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
VCAN-211ENST00000513984 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.52
VCAN-211ENST00000513984 UNC5CLQ8IV45 518 aa18.32■□□□□ 0.52
VCAN-211ENST00000513984 USP26Q9BXU7 913 aa18.32■□□□□ 0.52
VCAN-211ENST00000513984 ERC2O15083 957 aa18.31■□□□□ 0.52
VCAN-211ENST00000513984 SASH1O94885 1247 aa18.31■□□□□ 0.52
VCAN-211ENST00000513984 REC8O95072 547 aa18.31■□□□□ 0.52
VCAN-211ENST00000513984 COPRSQ9NQ92 184 aa18.31■□□□□ 0.52
VCAN-211ENST00000513984 BCL9LQ86UU0 1499 aa18.31■□□□□ 0.52
VCAN-211ENST00000513984 CYP19A1P11511 503 aaPredicted RBP18.3■□□□□ 0.52
VCAN-211ENST00000513984 RFX5P48382 616 aaPredicted RBP18.3■□□□□ 0.52
VCAN-211ENST00000513984 MARCH10Q8NA82 808 aaPredicted RBP18.3■□□□□ 0.52
VCAN-211ENST00000513984 SNX21Q969T3 373 aa18.3■□□□□ 0.52
VCAN-211ENST00000513984 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
VCAN-211ENST00000513984 ISCA1Q9BUE6 129 aa18.3■□□□□ 0.52
VCAN-211ENST00000513984 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
VCAN-211ENST00000513984 JARID2Q92833 1246 aaPredicted RBP18.3■□□□□ 0.52
VCAN-211ENST00000513984 ZNF831Q5JPB2 1677 aa18.29■□□□□ 0.52
VCAN-211ENST00000513984 MYH3P11055 1940 aa18.29■□□□□ 0.52
VCAN-211ENST00000513984 CHMLP26374 656 aa18.29■□□□□ 0.52
VCAN-211ENST00000513984 TCIRG1Q13488 830 aa18.29■□□□□ 0.52
VCAN-211ENST00000513984 RILPL2Q969X0 211 aa18.29■□□□□ 0.52
VCAN-211ENST00000513984 CCDC9Q9Y3X0 531 aaKnown RBP18.29■□□□□ 0.52
VCAN-211ENST00000513984 GLRX3O76003 335 aaKnown RBP18.28■□□□□ 0.52
VCAN-211ENST00000513984 FOXO4P98177 505 aa18.28■□□□□ 0.52
VCAN-211ENST00000513984 PTPN12Q05209 780 aaKnown RBP18.28■□□□□ 0.52
VCAN-211ENST00000513984 TRIM28Q13263 835 aaKnown RBP18.28■□□□□ 0.52
VCAN-211ENST00000513984 KIF6Q6ZMV9 814 aa18.28■□□□□ 0.52
VCAN-211ENST00000513984 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
VCAN-211ENST00000513984 VPS72Q15906 364 aa18.28■□□□□ 0.52
VCAN-211ENST00000513984 GPATCH3Q96I76 525 aa18.28■□□□□ 0.52
VCAN-211ENST00000513984 COL5A3P25940 1745 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms