RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 COL11A2P13942 1736 aaPredicted RBP16.42■□□□□ 0.22
PTPN20-229ENST00000513756 MLLT1Q03111 559 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-229ENST00000513756 WDR33Q9C0J8 1336 aaKnown RBP16.41■□□□□ 0.22
PTPN20-229ENST00000513756 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
PTPN20-229ENST00000513756 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
PTPN20-229ENST00000513756 TBC1D2BQ9UPU7 963 aa16.4■□□□□ 0.22
PTPN20-229ENST00000513756 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
PTPN20-229ENST00000513756 EPHX2P34913 555 aa16.39■□□□□ 0.21
PTPN20-229ENST00000513756 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
PTPN20-229ENST00000513756 CNTROBQ8N137 903 aa16.39■□□□□ 0.21
PTPN20-229ENST00000513756 BEGAINQ9BUH8 593 aa16.39■□□□□ 0.21
PTPN20-229ENST00000513756 ABT1Q9ULW3 272 aaKnown RBP16.39■□□□□ 0.21
PTPN20-229ENST00000513756 SCN7AQ01118 1682 aa16.38■□□□□ 0.21
PTPN20-229ENST00000513756 CCDC85CA6NKD9 419 aa16.38■□□□□ 0.21
PTPN20-229ENST00000513756 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPN20-229ENST00000513756 UBR2Q8IWV8 1755 aa16.38■□□□□ 0.21
PTPN20-229ENST00000513756 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
PTPN20-229ENST00000513756 CACNA1SQ13698 1873 aa16.37■□□□□ 0.21
PTPN20-229ENST00000513756 RGS19P49795 217 aa16.37■□□□□ 0.21
PTPN20-229ENST00000513756 HMOX1P09601 288 aa16.36■□□□□ 0.21
PTPN20-229ENST00000513756 NPR1P16066 1061 aa16.36■□□□□ 0.21
PTPN20-229ENST00000513756 MTHFSDQ2M296 383 aaKnown RBP16.36■□□□□ 0.21
PTPN20-229ENST00000513756 MAP1SQ66K74 1059 aaPredicted RBP16.36■□□□□ 0.21
PTPN20-229ENST00000513756 RTKN2Q8IZC4 609 aa16.36■□□□□ 0.21
PTPN20-229ENST00000513756 C7orf43Q8WVR3 580 aa16.36■□□□□ 0.21
PTPN20-229ENST00000513756 ZNF277Q9NRM2 450 aaPredicted RBP16.36■□□□□ 0.21
PTPN20-229ENST00000513756 ZNF541Q9H0D2 1346 aa16.36■□□□□ 0.21
PTPN20-229ENST00000513756 HEG1Q9ULI3 1381 aa16.36■□□□□ 0.21
PTPN20-229ENST00000513756 CAMTA2O94983 1202 aa16.35■□□□□ 0.21
PTPN20-229ENST00000513756 ECE1P42892 770 aa16.35■□□□□ 0.21
PTPN20-229ENST00000513756 ZNF496Q96IT1 587 aaPredicted RBP16.35■□□□□ 0.21
PTPN20-229ENST00000513756 KNSTRNQ9Y448 316 aa16.35■□□□□ 0.21
PTPN20-229ENST00000513756 ADAMTSL1Q8N6G6 1762 aa16.34■□□□□ 0.21
PTPN20-229ENST00000513756 TEFQ10587 303 aa16.34■□□□□ 0.21
PTPN20-229ENST00000513756 ZNF790Q6PG37 636 aa16.34■□□□□ 0.21
PTPN20-229ENST00000513756 NBPF5PQ86XG9 351 aaPredicted RBP16.34■□□□□ 0.21
PTPN20-229ENST00000513756 GPC2Q8N158 579 aa16.34■□□□□ 0.21
PTPN20-229ENST00000513756 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
PTPN20-229ENST00000513756 FZD9O00144 591 aa16.33■□□□□ 0.2
PTPN20-229ENST00000513756 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.2
PTPN20-229ENST00000513756 DZIP3Q86Y13 1208 aaKnown RBP16.33■□□□□ 0.2
PTPN20-229ENST00000513756 FMNL2Q96PY5 1086 aa16.33■□□□□ 0.2
PTPN20-229ENST00000513756 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTPN20-229ENST00000513756 RNF123Q5XPI4 1314 aa16.33■□□□□ 0.2
PTPN20-229ENST00000513756 A1BGP04217 495 aa16.32■□□□□ 0.2
PTPN20-229ENST00000513756 IARSP41252 1262 aaKnown RBP16.32■□□□□ 0.2
PTPN20-229ENST00000513756 PAXIP1Q6ZW49 1069 aaPredicted RBP16.32■□□□□ 0.2
PTPN20-229ENST00000513756 CAPNS2Q96L46 248 aa16.32■□□□□ 0.2
PTPN20-229ENST00000513756 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
PTPN20-229ENST00000513756 KLRG2A4D1S0 409 aaPredicted RBP16.31■□□□□ 0.2
PTPN20-229ENST00000513756 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
PTPN20-229ENST00000513756 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
PTPN20-229ENST00000513756 JDP2Q8WYK2 163 aa16.31■□□□□ 0.2
PTPN20-229ENST00000513756 GPR101Q96P66 508 aaPredicted RBP16.31■□□□□ 0.2
PTPN20-229ENST00000513756 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
PTPN20-229ENST00000513756 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
PTPN20-229ENST00000513756 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
PTPN20-229ENST00000513756 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
PTPN20-229ENST00000513756 EIF6P56537 245 aaKnown RBP16.29■□□□□ 0.2
PTPN20-229ENST00000513756 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
PTPN20-229ENST00000513756 THSD7BQ9C0I4 1608 aa16.28■□□□□ 0.2
PTPN20-229ENST00000513756 CA12O43570 354 aa16.28■□□□□ 0.2
PTPN20-229ENST00000513756 MAP2K2P36507 400 aa16.28■□□□□ 0.2
PTPN20-229ENST00000513756 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTPN20-229ENST00000513756 GRM1Q13255 1194 aa16.28■□□□□ 0.2
PTPN20-229ENST00000513756 CYP4F22Q6NT55 531 aa16.28■□□□□ 0.2
PTPN20-229ENST00000513756 GAS2L2Q8NHY3 880 aa16.28■□□□□ 0.2
PTPN20-229ENST00000513756 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
PTPN20-229ENST00000513756 PSMD1Q99460 953 aa16.28■□□□□ 0.2
PTPN20-229ENST00000513756 IL17REQ8NFR9 667 aa16.27■□□□□ 0.2
PTPN20-229ENST00000513756 GJA3Q9Y6H8 435 aa16.27■□□□□ 0.2
PTPN20-229ENST00000513756 RGL2O15211 777 aa16.26■□□□□ 0.19
PTPN20-229ENST00000513756 OLFM4Q6UX06 510 aa16.26■□□□□ 0.19
PTPN20-229ENST00000513756 USP50Q70EL3 339 aaPredicted RBP16.26■□□□□ 0.19
PTPN20-229ENST00000513756 TLL2Q9Y6L7 1015 aa16.26■□□□□ 0.19
PTPN20-229ENST00000513756 BTBD11A6QL63 1104 aa16.25■□□□□ 0.19
PTPN20-229ENST00000513756 GTF2E1P29083 439 aaPredicted RBP16.25■□□□□ 0.19
PTPN20-229ENST00000513756 GRIPAP1Q4V328 841 aa16.25■□□□□ 0.19
PTPN20-229ENST00000513756 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
PTPN20-229ENST00000513756 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTPN20-229ENST00000513756 HSPA5P11021 654 aaKnown RBP16.24■□□□□ 0.19
PTPN20-229ENST00000513756 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
PTPN20-229ENST00000513756 MCOLN1Q9GZU1 580 aa16.24■□□□□ 0.19
PTPN20-229ENST00000513756 TRPM7Q96QT4 1865 aa16.24■□□□□ 0.19
PTPN20-229ENST00000513756 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
PTPN20-229ENST00000513756 CST9Q5W186 159 aa16.23■□□□□ 0.19
PTPN20-229ENST00000513756 TSKSQ9UJT2 592 aa16.23■□□□□ 0.19
PTPN20-229ENST00000513756 USP16Q9Y5T5 823 aa16.23■□□□□ 0.19
PTPN20-229ENST00000513756 FAM177BA6PVY3 158 aa16.22■□□□□ 0.19
PTPN20-229ENST00000513756 AOC2O75106 756 aa16.22■□□□□ 0.19
PTPN20-229ENST00000513756 EPS15P42566 896 aa16.22■□□□□ 0.19
PTPN20-229ENST00000513756 SCNN1DP51172 638 aa16.22■□□□□ 0.19
PTPN20-229ENST00000513756 FMR1Q06787 632 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTPN20-229ENST00000513756 TNRC18O15417 2968 aaPredicted RBP16.22■□□□□ 0.19
PTPN20-229ENST00000513756 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
PTPN20-229ENST00000513756 PIP4K2AP48426 406 aaPredicted RBP16.21■□□□□ 0.19
PTPN20-229ENST00000513756 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
PTPN20-229ENST00000513756 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
PTPN20-229ENST00000513756 HHIPL1Q96JK4 782 aa16.21■□□□□ 0.19
PTPN20-229ENST00000513756 NYXQ9GZU5 481 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms