RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 AKAP4Q5JQC9 854 aa12.33□□□□□ -0.44
CAST-239ENST00000513666 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
CAST-239ENST00000513666 BRIP1Q9BX63 1249 aa12.33□□□□□ -0.44
CAST-239ENST00000513666 SLC39A6Q13433 755 aa12.32□□□□□ -0.44
CAST-239ENST00000513666 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
CAST-239ENST00000513666 SULT6B1Q6IMI4 303 aa12.32□□□□□ -0.44
CAST-239ENST00000513666 BICDL1Q6ZP65 573 aa12.32□□□□□ -0.44
CAST-239ENST00000513666 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
CAST-239ENST00000513666 ABHD8Q96I13 439 aa12.32□□□□□ -0.44
CAST-239ENST00000513666 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
CAST-239ENST00000513666 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
CAST-239ENST00000513666 TAF1DQ9H5J8 278 aaPredicted RBP12.32□□□□□ -0.44
CAST-239ENST00000513666 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
CAST-239ENST00000513666 SCN7AQ01118 1682 aa12.31□□□□□ -0.44
CAST-239ENST00000513666 SLX4Q8IY92 1834 aa12.31□□□□□ -0.44
CAST-239ENST00000513666 ARFGEF2Q9Y6D5 1785 aa12.31□□□□□ -0.44
CAST-239ENST00000513666 A0A087WZG4 1122 aa12.31□□□□□ -0.44
CAST-239ENST00000513666 RNMTO43148 476 aaKnown RBP12.31□□□□□ -0.44
CAST-239ENST00000513666 CANXP27824 592 aaKnown RBP12.31□□□□□ -0.44
CAST-239ENST00000513666 EIF5P55010 431 aaKnown RBP12.31□□□□□ -0.44
CAST-239ENST00000513666 TBC1D9BQ66K14 1250 aa12.31□□□□□ -0.44
CAST-239ENST00000513666 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
CAST-239ENST00000513666 UBR2Q8IWV8 1755 aa12.31□□□□□ -0.44
CAST-239ENST00000513666 CACNA1SQ13698 1873 aa12.3□□□□□ -0.44
CAST-239ENST00000513666 HSPA8P11142 646 aaKnown RBP12.3□□□□□ -0.44
CAST-239ENST00000513666 SOGA3Q5TF21 947 aa12.3□□□□□ -0.44
CAST-239ENST00000513666 CNKSR1Q969H4 720 aa12.3□□□□□ -0.44
CAST-239ENST00000513666 ADAMTSL1Q8N6G6 1762 aa12.29□□□□□ -0.44
CAST-239ENST00000513666 IL13P35225 146 aa12.29□□□□□ -0.44
CAST-239ENST00000513666 STYK1Q6J9G0 422 aa12.29□□□□□ -0.44
CAST-239ENST00000513666 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
CAST-239ENST00000513666 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
CAST-239ENST00000513666 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
CAST-239ENST00000513666 CCDC24Q8N4L8 307 aa12.28□□□□□ -0.44
CAST-239ENST00000513666 STARD3NLO95772 234 aa12.27□□□□□ -0.44
CAST-239ENST00000513666 SRGNP10124 158 aa12.27□□□□□ -0.44
CAST-239ENST00000513666 MAP2K1Q02750 393 aaPredicted RBP12.27□□□□□ -0.44
CAST-239ENST00000513666 DEFB115Q30KQ5 88 aa12.27□□□□□ -0.44
CAST-239ENST00000513666 EAPPQ56P03 285 aaPredicted RBP12.27□□□□□ -0.44
CAST-239ENST00000513666 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.44
CAST-239ENST00000513666 MORC1Q86VD1 984 aa12.27□□□□□ -0.45
CAST-239ENST00000513666 CNBD1Q8NA66 436 aa12.27□□□□□ -0.45
CAST-239ENST00000513666 MASTLQ96GX5 879 aa12.27□□□□□ -0.45
CAST-239ENST00000513666 HACL1Q9UJ83 578 aa12.27□□□□□ -0.45
CAST-239ENST00000513666 WDR33Q9C0J8 1336 aaKnown RBP12.26□□□□□ -0.45
CAST-239ENST00000513666 RGS19P49795 217 aa12.26□□□□□ -0.45
CAST-239ENST00000513666 MLLT1Q03111 559 aaPredicted RBP12.26□□□□□ -0.45
CAST-239ENST00000513666 C7orf43Q8WVR3 580 aa12.26□□□□□ -0.45
CAST-239ENST00000513666 PANK3Q9H999 370 aa12.26□□□□□ -0.45
CAST-239ENST00000513666 TBC1D2BQ9UPU7 963 aa12.26□□□□□ -0.45
CAST-239ENST00000513666 THSD7BQ9C0I4 1608 aa12.25□□□□□ -0.45
CAST-239ENST00000513666 ZNF541Q9H0D2 1346 aa12.25□□□□□ -0.45
CAST-239ENST00000513666 EPHX2P34913 555 aa12.25□□□□□ -0.45
CAST-239ENST00000513666 ST5P78524 1137 aa12.25□□□□□ -0.45
CAST-239ENST00000513666 CCDC93Q567U6 631 aa12.25□□□□□ -0.45
CAST-239ENST00000513666 TTC5Q8N0Z6 440 aa12.25□□□□□ -0.45
CAST-239ENST00000513666 SETDB2Q96T68 719 aa12.25□□□□□ -0.45
CAST-239ENST00000513666 NPHP1O15259 732 aa12.24□□□□□ -0.45
CAST-239ENST00000513666 IL6STP40189 918 aaPredicted RBP12.24□□□□□ -0.45
CAST-239ENST00000513666 FKBP4Q02790 459 aaKnown RBP eCLIP12.24□□□□□ -0.45
CAST-239ENST00000513666 PNMA8AQ86V59 439 aaPredicted RBP12.24□□□□□ -0.45
CAST-239ENST00000513666 CNTROBQ8N137 903 aa12.24□□□□□ -0.45
CAST-239ENST00000513666 TEX13AQ9BXU3 409 aaPredicted RBP12.24□□□□□ -0.45
CAST-239ENST00000513666 BCORQ6W2J9 1755 aa12.24□□□□□ -0.45
CAST-239ENST00000513666 CCDC85CA6NKD9 419 aa12.23□□□□□ -0.45
CAST-239ENST00000513666 CAMTA2O94983 1202 aa12.23□□□□□ -0.45
CAST-239ENST00000513666 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
CAST-239ENST00000513666 MAP1SQ66K74 1059 aaPredicted RBP12.23□□□□□ -0.45
CAST-239ENST00000513666 ZNF330Q9Y3S2 320 aaPredicted RBP12.23□□□□□ -0.45
CAST-239ENST00000513666 HEG1Q9ULI3 1381 aa12.23□□□□□ -0.45
CAST-239ENST00000513666 ZNF496Q96IT1 587 aaPredicted RBP12.22□□□□□ -0.45
CAST-239ENST00000513666 ZNF277Q9NRM2 450 aaPredicted RBP12.22□□□□□ -0.45
CAST-239ENST00000513666 ABT1Q9ULW3 272 aaKnown RBP12.22□□□□□ -0.45
CAST-239ENST00000513666 RNF123Q5XPI4 1314 aa12.22□□□□□ -0.45
CAST-239ENST00000513666 HMOX1P09601 288 aa12.21□□□□□ -0.45
CAST-239ENST00000513666 FZD9O00144 591 aa12.21□□□□□ -0.46
CAST-239ENST00000513666 NPR1P16066 1061 aa12.21□□□□□ -0.46
CAST-239ENST00000513666 CD44P16070 742 aaKnown RBP12.21□□□□□ -0.46
CAST-239ENST00000513666 DDX21Q9NR30 783 aaKnown RBP eCLIP12.21□□□□□ -0.46
CAST-239ENST00000513666 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
CAST-239ENST00000513666 KLRG2A4D1S0 409 aaPredicted RBP12.2□□□□□ -0.46
CAST-239ENST00000513666 ECE1P42892 770 aa12.2□□□□□ -0.46
CAST-239ENST00000513666 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
CAST-239ENST00000513666 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
CAST-239ENST00000513666 RTKN2Q8IZC4 609 aa12.2□□□□□ -0.46
CAST-239ENST00000513666 GPC2Q8N158 579 aa12.2□□□□□ -0.46
CAST-239ENST00000513666 CAPNS2Q96L46 248 aa12.2□□□□□ -0.46
CAST-239ENST00000513666 BEGAINQ9BUH8 593 aa12.2□□□□□ -0.46
CAST-239ENST00000513666 A1BGP04217 495 aa12.19□□□□□ -0.46
CAST-239ENST00000513666 IARSP41252 1262 aaKnown RBP12.19□□□□□ -0.46
CAST-239ENST00000513666 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
CAST-239ENST00000513666 OLFM4Q6UX06 510 aa12.19□□□□□ -0.46
CAST-239ENST00000513666 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
CAST-239ENST00000513666 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
CAST-239ENST00000513666 TRPM7Q96QT4 1865 aa12.18□□□□□ -0.46
CAST-239ENST00000513666 GABBR2O75899 941 aa12.18□□□□□ -0.46
CAST-239ENST00000513666 TEFQ10587 303 aa12.18□□□□□ -0.46
CAST-239ENST00000513666 CLEC4GQ6UXB4 293 aa12.18□□□□□ -0.46
CAST-239ENST00000513666 GPR101Q96P66 508 aaPredicted RBP12.18□□□□□ -0.46
CAST-239ENST00000513666 FMNL2Q96PY5 1086 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms