RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 ZEB1P37275 1124 aaPredicted RBP9.58□□□□□ -0.88
HTT-212ENST00000513639 SOGA3Q5TF21 947 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 NBPF10Q6P3W6 841 aaKnown RBP9.58□□□□□ -0.88
HTT-212ENST00000513639 C16orf71Q8IYS4 520 aaPredicted RBP9.58□□□□□ -0.88
HTT-212ENST00000513639 NBPF15Q8N660 670 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 RNF181Q9P0P0 153 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 TSPYL4Q9UJ04 414 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 NIP7Q9Y221 180 aaKnown RBP eCLIP9.58□□□□□ -0.88
HTT-212ENST00000513639 RRP7AQ9Y3A4 280 aaKnown RBP9.58□□□□□ -0.88
HTT-212ENST00000513639 TJP1Q07157 1748 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 ZC3H4Q9UPT8 1303 aaKnown RBP9.57□□□□□ -0.88
HTT-212ENST00000513639 TMPOP42166 694 aaKnown RBP9.57□□□□□ -0.88
HTT-212ENST00000513639 STYK1Q6J9G0 422 aa9.57□□□□□ -0.88
HTT-212ENST00000513639 KIF6Q6ZMV9 814 aa9.57□□□□□ -0.88
HTT-212ENST00000513639 RUNDC1Q96C34 613 aa9.57□□□□□ -0.88
HTT-212ENST00000513639 MASTLQ96GX5 879 aa9.57□□□□□ -0.88
HTT-212ENST00000513639 NYXQ9GZU5 481 aa9.57□□□□□ -0.88
HTT-212ENST00000513639 KIF13BQ9NQT8 1826 aa9.56□□□□□ -0.88
HTT-212ENST00000513639 KIF3CO14782 793 aa9.56□□□□□ -0.88
HTT-212ENST00000513639 SRGNP10124 158 aa9.56□□□□□ -0.88
HTT-212ENST00000513639 ALDH1B1P30837 517 aa9.56□□□□□ -0.88
HTT-212ENST00000513639 PIP4K2AP48426 406 aaPredicted RBP9.56□□□□□ -0.88
HTT-212ENST00000513639 DPY19L2Q6NUT2 758 aa9.56□□□□□ -0.88
HTT-212ENST00000513639 NGEFQ8N5V2 710 aa9.56□□□□□ -0.88
HTT-212ENST00000513639 THUMPD2Q9BTF0 503 aaKnown RBP9.56□□□□□ -0.88
HTT-212ENST00000513639 ERBB4Q15303 1308 aa9.56□□□□□ -0.88
HTT-212ENST00000513639 KLRG2A4D1S0 409 aaPredicted RBP9.55□□□□□ -0.88
HTT-212ENST00000513639 C21orf2O43822 256 aa9.55□□□□□ -0.88
HTT-212ENST00000513639 NPR1P16066 1061 aa9.55□□□□□ -0.88
HTT-212ENST00000513639 HSPA6P17066 643 aa9.55□□□□□ -0.88
HTT-212ENST00000513639 NEUROD2Q15784 382 aa9.55□□□□□ -0.88
HTT-212ENST00000513639 ADAMTS8Q9UP79 889 aa9.55□□□□□ -0.88
HTT-212ENST00000513639 GLTPD2A6NH11 291 aa9.54□□□□□ -0.88
HTT-212ENST00000513639 MYL6BP14649 208 aa9.54□□□□□ -0.88
HTT-212ENST00000513639 VEGFAP15692 232 aaPredicted RBP9.54□□□□□ -0.88
HTT-212ENST00000513639 EIF2S2P20042 333 aaKnown RBP9.54□□□□□ -0.88
HTT-212ENST00000513639 HLFQ16534 295 aa9.54□□□□□ -0.88
HTT-212ENST00000513639 CCDC24Q8N4L8 307 aa9.54□□□□□ -0.88
HTT-212ENST00000513639 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
HTT-212ENST00000513639 CHMP4AQ9BY43 222 aa9.54□□□□□ -0.88
HTT-212ENST00000513639 PRKRIP1Q9H875 184 aaPredicted RBP9.54□□□□□ -0.88
HTT-212ENST00000513639 RRAGCQ9HB90 399 aa9.54□□□□□ -0.88
HTT-212ENST00000513639 N4BP2Q86UW6 1770 aaPredicted RBP9.54□□□□□ -0.88
HTT-212ENST00000513639 UBR2Q8IWV8 1755 aa9.54□□□□□ -0.88
HTT-212ENST00000513639 MAP3K15Q6ZN16 1313 aa9.54□□□□□ -0.88
HTT-212ENST00000513639 CHL1O00533 1208 aa9.53□□□□□ -0.88
HTT-212ENST00000513639 APLP1P51693 650 aa9.53□□□□□ -0.88
HTT-212ENST00000513639 CALD1Q05682 793 aaKnown RBP9.53□□□□□ -0.88
HTT-212ENST00000513639 FSTL1Q12841 308 aa9.53□□□□□ -0.88
HTT-212ENST00000513639 PRPF40BQ6NWY9 871 aaKnown RBP9.53□□□□□ -0.88
HTT-212ENST00000513639 PPP1R42Q7Z4L9 355 aa9.53□□□□□ -0.88
HTT-212ENST00000513639 RTKN2Q8IZC4 609 aa9.53□□□□□ -0.88
HTT-212ENST00000513639 NMRK2Q9NPI5 230 aa9.53□□□□□ -0.88
HTT-212ENST00000513639 ZNF219Q9P2Y4 722 aaPredicted RBP9.53□□□□□ -0.88
HTT-212ENST00000513639 FAM177BA6PVY3 158 aa9.52□□□□□ -0.89
HTT-212ENST00000513639 ERFEQ4G0M1 354 aa9.52□□□□□ -0.89
HTT-212ENST00000513639 GRIPAP1Q4V328 841 aa9.52□□□□□ -0.89
HTT-212ENST00000513639 PARP10Q53GL7 1025 aa9.52□□□□□ -0.89
HTT-212ENST00000513639 GIGYF2Q6Y7W6 1299 aaKnown RBP9.52□□□□□ -0.89
HTT-212ENST00000513639 CCDC146Q8IYE0 955 aa9.52□□□□□ -0.89
HTT-212ENST00000513639 TAOK3Q9H2K8 898 aa9.52□□□□□ -0.89
HTT-212ENST00000513639 LAS1LQ9Y4W2 734 aaKnown RBP9.52□□□□□ -0.89
HTT-212ENST00000513639 SIPA1L3O60292 1781 aaPredicted RBP9.52□□□□□ -0.89
HTT-212ENST00000513639 LTBP3Q9NS15 1303 aa9.52□□□□□ -0.89
HTT-212ENST00000513639 NFKBIEO00221 500 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 RASSF7Q02833 373 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 CCDC93Q567U6 631 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 HSP90AB3PQ58FF7 597 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 CC2D2BQ6DHV5 1058 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 TTLL7Q6ZT98 887 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 ZNF34Q8IZ26 560 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 C7orf43Q8WVR3 580 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 CFAP44Q96MT7 982 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 TMX4Q9H1E5 349 aaPredicted RBP9.51□□□□□ -0.89
HTT-212ENST00000513639 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 TRIM35Q9UPQ4 493 aa9.51□□□□□ -0.89
HTT-212ENST00000513639 VIRMAQ69YN4 1812 aaKnown RBP9.51□□□□□ -0.89
HTT-212ENST00000513639 HOXB7P09629 217 aa9.5□□□□□ -0.89
HTT-212ENST00000513639 HOXA10P31260 410 aaPredicted RBP9.5□□□□□ -0.89
HTT-212ENST00000513639 PDIA6Q15084 440 aa9.5□□□□□ -0.89
HTT-212ENST00000513639 RPGRQ92834 1020 aaKnown RBP9.5□□□□□ -0.89
HTT-212ENST00000513639 RBM17Q96I25 401 aaKnown RBP9.5□□□□□ -0.89
HTT-212ENST00000513639 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
HTT-212ENST00000513639 UTP14AQ9BVJ6 771 aaKnown RBP9.5□□□□□ -0.89
HTT-212ENST00000513639 DDX21Q9NR30 783 aaKnown RBP eCLIP9.5□□□□□ -0.89
HTT-212ENST00000513639 KIAA1551Q9HCM1 1747 aa9.5□□□□□ -0.89
HTT-212ENST00000513639 NRXN2Q9P2S2 1712 aa9.49□□□□□ -0.89
HTT-212ENST00000513639 GPTP24298 496 aa9.49□□□□□ -0.89
HTT-212ENST00000513639 CRY2Q49AN0 593 aa9.49□□□□□ -0.89
HTT-212ENST00000513639 SLC10A5Q5PT55 438 aa9.49□□□□□ -0.89
HTT-212ENST00000513639 SUSD4Q5VX71 490 aa9.49□□□□□ -0.89
HTT-212ENST00000513639 COPS6Q7L5N1 327 aa9.49□□□□□ -0.89
HTT-212ENST00000513639 SMC1BQ8NDV3 1235 aa9.49□□□□□ -0.89
HTT-212ENST00000513639 DBF4Q9UBU7 674 aaPredicted RBP9.49□□□□□ -0.89
HTT-212ENST00000513639 ARFGEF1Q9Y6D6 1849 aa9.49□□□□□ -0.89
HTT-212ENST00000513639 AFDNP55196 1824 aaKnown RBP9.48□□□□□ -0.89
HTT-212ENST00000513639 APAF1O14727 1248 aa9.48□□□□□ -0.89
HTT-212ENST00000513639 PRELPP51888 382 aa9.48□□□□□ -0.89
HTT-212ENST00000513639 GNAI1P63096 354 aa9.48□□□□□ -0.89
HTT-212ENST00000513639 FKBP4Q02790 459 aaKnown RBP eCLIP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms