RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 IPO9Q96P70 1041 aaKnown RBP10.75□□□□□ -0.69
PPARGC1A-211ENST00000513205 UPF2Q9HAU5 1272 aaKnown RBP10.75□□□□□ -0.69
PPARGC1A-211ENST00000513205 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
PPARGC1A-211ENST00000513205 RNMTO43148 476 aaKnown RBP10.75□□□□□ -0.69
PPARGC1A-211ENST00000513205 GNAI3P08754 354 aa10.75□□□□□ -0.69
PPARGC1A-211ENST00000513205 RGS3P49796 1198 aa10.75□□□□□ -0.69
PPARGC1A-211ENST00000513205 C8orf34Q49A92 452 aa10.75□□□□□ -0.69
PPARGC1A-211ENST00000513205 PDZRN3Q9UPQ7 1066 aa10.75□□□□□ -0.69
PPARGC1A-211ENST00000513205 ZNF335Q9H4Z2 1342 aaPredicted RBP10.74□□□□□ -0.69
PPARGC1A-211ENST00000513205 ZBTB7CA1YPR0 619 aa10.74□□□□□ -0.69
PPARGC1A-211ENST00000513205 EIF4A1P60842 406 aaKnown RBP10.74□□□□□ -0.69
PPARGC1A-211ENST00000513205 NUCB1Q02818 461 aa10.74□□□□□ -0.69
PPARGC1A-211ENST00000513205 FLIIQ13045 1269 aa10.74□□□□□ -0.69
PPARGC1A-211ENST00000513205 USHBP1Q8N6Y0 703 aa10.74□□□□□ -0.69
PPARGC1A-211ENST00000513205 LRRC59Q96AG4 307 aaKnown RBP10.74□□□□□ -0.69
PPARGC1A-211ENST00000513205 HEG1Q9ULI3 1381 aa10.74□□□□□ -0.69
PPARGC1A-211ENST00000513205 ABCA3Q99758 1704 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 SIPA1L3O60292 1781 aaPredicted RBP10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 RGPD2P0DJD1 1756 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 BTBD11A6QL63 1104 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 ZC3H6P61129 1189 aaKnown RBP10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 HDGFL1Q5TGJ6 251 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 ERICH6Q7L0X2 663 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 IFNL2Q8IZJ0 200 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 OXER1Q8TDS5 423 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 DCAF5Q96JK2 942 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 KCNK17Q96T54 332 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 VPS9D1Q9Y2B5 631 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 WDR17Q8IZU2 1322 aa10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 AHDC1Q5TGY3 1603 aaPredicted RBP10.73□□□□□ -0.69
PPARGC1A-211ENST00000513205 ATP10DQ9P241 1426 aa10.72□□□□□ -0.69
PPARGC1A-211ENST00000513205 CSB-PGBD3P0DP91 1061 aa10.72□□□□□ -0.69
PPARGC1A-211ENST00000513205 ANKRD44Q8N8A2 993 aa10.72□□□□□ -0.69
PPARGC1A-211ENST00000513205 NLRP2Q9NX02 1062 aa10.72□□□□□ -0.69
PPARGC1A-211ENST00000513205 DBF4Q9UBU7 674 aaPredicted RBP10.72□□□□□ -0.69
PPARGC1A-211ENST00000513205 SCN11AQ9UI33 1791 aa10.71□□□□□ -0.69
PPARGC1A-211ENST00000513205 COL5A2P05997 1499 aaPredicted RBP10.71□□□□□ -0.69
PPARGC1A-211ENST00000513205 FKBP5Q13451 457 aaPredicted RBP10.71□□□□□ -0.69
PPARGC1A-211ENST00000513205 CHD1LQ86WJ1 897 aa10.71□□□□□ -0.69
PPARGC1A-211ENST00000513205 PRDM11Q9NQV5 511 aa10.71□□□□□ -0.69
PPARGC1A-211ENST00000513205 PCDH11XQ9BZA7 1347 aa10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 PCDH11YQ9BZA8 1340 aa10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 PHKG2P15735 406 aa10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 KRT24Q2M2I5 525 aa10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 BMP2KLQ5H9B9 411 aa10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 DCTPP1Q9H773 170 aa10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 NOP58Q9Y2X3 529 aaKnown RBP10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 RGPD5Q99666 1765 aa10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 COL22A1Q8NFW1 1626 aaPredicted RBP10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 MEGF6O75095 1541 aa10.7□□□□□ -0.7
PPARGC1A-211ENST00000513205 GNAI2P04899 355 aa10.69□□□□□ -0.7
PPARGC1A-211ENST00000513205 SLC4A5Q9BY07 1137 aa10.69□□□□□ -0.7
PPARGC1A-211ENST00000513205 SLC52A2Q9HAB3 445 aa10.69□□□□□ -0.7
PPARGC1A-211ENST00000513205 HYPKQ9NX55 129 aa10.69□□□□□ -0.7
PPARGC1A-211ENST00000513205 MIS18AQ9NYP9 233 aa10.69□□□□□ -0.7
PPARGC1A-211ENST00000513205 DDX58O95786 925 aaKnown RBP10.68□□□□□ -0.7
PPARGC1A-211ENST00000513205 MPRIPQ6WCQ1 1025 aa10.68□□□□□ -0.7
PPARGC1A-211ENST00000513205 CARD10Q9BWT7 1032 aa10.68□□□□□ -0.7
PPARGC1A-211ENST00000513205 LGR6Q9HBX8 967 aa10.68□□□□□ -0.7
PPARGC1A-211ENST00000513205 KDM6AO15550 1401 aaPredicted RBP10.68□□□□□ -0.7
PPARGC1A-211ENST00000513205 ERBB4Q15303 1308 aa10.68□□□□□ -0.7
PPARGC1A-211ENST00000513205 GIGYF1O75420 1035 aaPredicted RBP10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 MYT1Q01538 1121 aa10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 CEP85Q6P2H3 762 aa10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 COL14A1Q05707 1796 aaKnown RBP10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 ALDH1L1O75891 902 aa10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 PTPN5P54829 565 aa10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 ZNF790Q6PG37 636 aa10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 ZNF454Q8N9F8 522 aa10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 UPF1Q92900 1129 aaKnown RBP eCLIP10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 SRCIN1Q9C0H9 1055 aa10.67□□□□□ -0.7
PPARGC1A-211ENST00000513205 LTBP4Q8N2S1 1624 aa10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 ERVV-2B6SEH9 535 aa10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 BHMG1C9JSJ3 638 aaPredicted RBP10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 IL2RBP14784 551 aa10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 NKX1-1Q15270 411 aaPredicted RBP10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 ANKRD45Q5TZF3 282 aa10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 SLC4A10Q6U841 1118 aa10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 SIRT2Q8IXJ6 389 aa10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 TTC5Q8N0Z6 440 aa10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 DDX17Q92841 729 aaKnown RBP10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 DAXXQ9UER7 740 aaPredicted RBP10.66□□□□□ -0.7
PPARGC1A-211ENST00000513205 PLCH1Q4KWH8 1693 aa10.65□□□□□ -0.7
PPARGC1A-211ENST00000513205 UBTFL1P0CB47 393 aaPredicted RBP10.65□□□□□ -0.7
PPARGC1A-211ENST00000513205 TOM1L2Q6ZVM7 507 aa10.65□□□□□ -0.7
PPARGC1A-211ENST00000513205 DNAAF4Q8WXU2 420 aa10.65□□□□□ -0.7
PPARGC1A-211ENST00000513205 MEIS3Q99687 375 aa10.65□□□□□ -0.7
PPARGC1A-211ENST00000513205 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
PPARGC1A-211ENST00000513205 DDX21Q9NR30 783 aaKnown RBP eCLIP10.65□□□□□ -0.7
PPARGC1A-211ENST00000513205 LAMB4A4D0S4 1761 aa10.64□□□□□ -0.71
PPARGC1A-211ENST00000513205 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
PPARGC1A-211ENST00000513205 BECN1Q14457 450 aa10.64□□□□□ -0.71
PPARGC1A-211ENST00000513205 HSP90AB4PQ58FF6 505 aa10.64□□□□□ -0.71
PPARGC1A-211ENST00000513205 G2E3Q7L622 706 aa10.64□□□□□ -0.71
PPARGC1A-211ENST00000513205 ZCRB1Q8TBF4 217 aaKnown RBP10.64□□□□□ -0.71
PPARGC1A-211ENST00000513205 CABLES1Q8TDN4 633 aa10.64□□□□□ -0.71
PPARGC1A-211ENST00000513205 FMNL2Q96PY5 1086 aa10.64□□□□□ -0.71
PPARGC1A-211ENST00000513205 LNPKQ9C0E8 428 aa10.64□□□□□ -0.71
PPARGC1A-211ENST00000513205 ANO8Q9HCE9 1232 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms