RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 NLGN1Q8N2Q7 840 aa11.39□□□□□ -0.59
SDHC-208ENST00000513009 DNAJC5GQ8N7S2 189 aa11.39□□□□□ -0.59
SDHC-208ENST00000513009 EYA1Q99502 592 aa11.39□□□□□ -0.59
SDHC-208ENST00000513009 CARD14Q9BXL6 1004 aa11.39□□□□□ -0.59
SDHC-208ENST00000513009 WDR90Q96KV7 1748 aa11.38□□□□□ -0.59
SDHC-208ENST00000513009 PTCD2Q8WV60 388 aaKnown RBP11.38□□□□□ -0.59
SDHC-208ENST00000513009 ATG3Q9NT62 314 aa11.38□□□□□ -0.59
SDHC-208ENST00000513009 ZNF316A6NFI3 1004 aaPredicted RBP11.37□□□□□ -0.59
SDHC-208ENST00000513009 NUDT7P0C024 238 aa11.37□□□□□ -0.59
SDHC-208ENST00000513009 TRAPPC3LQ5T215 181 aa11.37□□□□□ -0.59
SDHC-208ENST00000513009 RC3H1Q5TC82 1133 aaKnown RBP11.37□□□□□ -0.59
SDHC-208ENST00000513009 SPNS2Q8IVW8 549 aa11.37□□□□□ -0.59
SDHC-208ENST00000513009 BCS1LQ9Y276 419 aa11.37□□□□□ -0.59
SDHC-208ENST00000513009 RTCBQ9Y3I0 505 aaKnown RBP11.37□□□□□ -0.59
SDHC-208ENST00000513009 CNTNAP4Q9C0A0 1308 aa11.36□□□□□ -0.59
SDHC-208ENST00000513009 A0A0G2JLW4 131 aa11.36□□□□□ -0.59
SDHC-208ENST00000513009 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
SDHC-208ENST00000513009 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
SDHC-208ENST00000513009 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
SDHC-208ENST00000513009 CCDC87Q9NVE4 849 aa11.36□□□□□ -0.59
SDHC-208ENST00000513009 MYH14Q7Z406 1995 aaKnown RBP11.36□□□□□ -0.59
SDHC-208ENST00000513009 ERVV-2B6SEH9 535 aa11.35□□□□□ -0.59
SDHC-208ENST00000513009 ARHGAP27Q6ZUM4 889 aa11.35□□□□□ -0.59
SDHC-208ENST00000513009 RBM46Q8TBY0 533 aaKnown RBP11.35□□□□□ -0.59
SDHC-208ENST00000513009 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
SDHC-208ENST00000513009 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
SDHC-208ENST00000513009 NMRK2Q9NPI5 230 aa11.35□□□□□ -0.59
SDHC-208ENST00000513009 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
SDHC-208ENST00000513009 RPS6KA4O75676 772 aa11.34□□□□□ -0.59
SDHC-208ENST00000513009 FCHSD2O94868 740 aa11.34□□□□□ -0.59
SDHC-208ENST00000513009 HSP90AB1P08238 724 aaKnown RBP11.34□□□□□ -0.59
SDHC-208ENST00000513009 GYS1P13807 737 aa11.34□□□□□ -0.59
SDHC-208ENST00000513009 DPEP1P16444 411 aa11.34□□□□□ -0.59
SDHC-208ENST00000513009 KCNA3P22001 575 aa11.33□□□□□ -0.6
SDHC-208ENST00000513009 PDE4AP27815 886 aa11.33□□□□□ -0.6
SDHC-208ENST00000513009 RFC4P35249 363 aa11.33□□□□□ -0.6
SDHC-208ENST00000513009 EIF4A2Q14240 407 aaKnown RBP11.33□□□□□ -0.6
SDHC-208ENST00000513009 DCAF5Q96JK2 942 aa11.33□□□□□ -0.6
SDHC-208ENST00000513009 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
SDHC-208ENST00000513009 SBF1O95248 1867 aa11.33□□□□□ -0.6
SDHC-208ENST00000513009 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
SDHC-208ENST00000513009 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
SDHC-208ENST00000513009 FSTL1Q12841 308 aa11.32□□□□□ -0.6
SDHC-208ENST00000513009 C9orf131Q5VYM1 1079 aa11.32□□□□□ -0.6
SDHC-208ENST00000513009 JMYQ8N9B5 988 aa11.32□□□□□ -0.6
SDHC-208ENST00000513009 LHX6Q9UPM6 363 aa11.32□□□□□ -0.6
SDHC-208ENST00000513009 KLRG1Q96E93 195 aa11.31□□□□□ -0.6
SDHC-208ENST00000513009 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
SDHC-208ENST00000513009 KDM6AO15550 1401 aaPredicted RBP11.31□□□□□ -0.6
SDHC-208ENST00000513009 TJP1Q07157 1748 aa11.31□□□□□ -0.6
SDHC-208ENST00000513009 KDM2BQ8NHM5 1336 aa11.31□□□□□ -0.6
SDHC-208ENST00000513009 ADAMTS7Q9UKP4 1686 aa11.3□□□□□ -0.6
SDHC-208ENST00000513009 KCPQ6ZWJ8 1503 aa11.3□□□□□ -0.6
SDHC-208ENST00000513009 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
SDHC-208ENST00000513009 C16orf71Q8IYS4 520 aaPredicted RBP11.3□□□□□ -0.6
SDHC-208ENST00000513009 CABP4P57796 275 aa11.29□□□□□ -0.6
SDHC-208ENST00000513009 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
SDHC-208ENST00000513009 AMOTQ4VCS5 1084 aa11.29□□□□□ -0.6
SDHC-208ENST00000513009 PLEKHO1Q53GL0 409 aaPredicted RBP11.29□□□□□ -0.6
SDHC-208ENST00000513009 DALRD3Q5D0E6 543 aaKnown RBP11.29□□□□□ -0.6
SDHC-208ENST00000513009 USP42Q9H9J4 1324 aaKnown RBP11.29□□□□□ -0.6
SDHC-208ENST00000513009 SCN11AQ9UI33 1791 aa11.28□□□□□ -0.6
SDHC-208ENST00000513009 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
SDHC-208ENST00000513009 DDR1Q08345 913 aa11.28□□□□□ -0.6
SDHC-208ENST00000513009 ZNF530Q6P9A1 599 aaPredicted RBP11.28□□□□□ -0.6
SDHC-208ENST00000513009 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
SDHC-208ENST00000513009 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
SDHC-208ENST00000513009 RNF181Q9P0P0 153 aa11.28□□□□□ -0.6
SDHC-208ENST00000513009 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
SDHC-208ENST00000513009 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.61
SDHC-208ENST00000513009 DLEC1Q9Y238 1755 aa11.27□□□□□ -0.61
SDHC-208ENST00000513009 MFSD10Q14728 455 aa11.27□□□□□ -0.61
SDHC-208ENST00000513009 SRP68Q9UHB9 627 aaKnown RBP11.27□□□□□ -0.61
SDHC-208ENST00000513009 AFDNP55196 1824 aaKnown RBP11.26□□□□□ -0.61
SDHC-208ENST00000513009 PTCD1O75127 700 aaKnown RBP11.26□□□□□ -0.61
SDHC-208ENST00000513009 TM4SF1P30408 202 aa11.26□□□□□ -0.61
SDHC-208ENST00000513009 MTHFSP49914 203 aa11.26□□□□□ -0.61
SDHC-208ENST00000513009 HTRA3P83110 453 aa11.26□□□□□ -0.61
SDHC-208ENST00000513009 COL13A1Q5TAT6 717 aaPredicted RBP11.26□□□□□ -0.61
SDHC-208ENST00000513009 RRAGCQ9HB90 399 aa11.26□□□□□ -0.61
SDHC-208ENST00000513009 POLRMTO00411 1230 aaKnown RBP11.25□□□□□ -0.61
SDHC-208ENST00000513009 CHRNA5P30532 468 aa11.25□□□□□ -0.61
SDHC-208ENST00000513009 TNNT2P45379 298 aaPredicted RBP11.25□□□□□ -0.61
SDHC-208ENST00000513009 C1orf141Q5JVX7 400 aa11.25□□□□□ -0.61
SDHC-208ENST00000513009 INTS5Q6P9B9 1019 aaKnown RBP11.25□□□□□ -0.61
SDHC-208ENST00000513009 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
SDHC-208ENST00000513009 NFATC2IPQ8NCF5 419 aa11.25□□□□□ -0.61
SDHC-208ENST00000513009 SMC1BQ8NDV3 1235 aa11.25□□□□□ -0.61
SDHC-208ENST00000513009 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
SDHC-208ENST00000513009 VIRMAQ69YN4 1812 aaKnown RBP11.24□□□□□ -0.61
SDHC-208ENST00000513009 CCDC88AQ3V6T2 1871 aa11.24□□□□□ -0.61
SDHC-208ENST00000513009 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
SDHC-208ENST00000513009 TBC1D12O60347 775 aa11.23□□□□□ -0.61
SDHC-208ENST00000513009 AEBP1Q8IUX7 1158 aa11.23□□□□□ -0.61
SDHC-208ENST00000513009 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
SDHC-208ENST00000513009 PANK3Q9H999 370 aa11.23□□□□□ -0.61
SDHC-208ENST00000513009 SOS1Q07889 1333 aaPredicted RBP11.23□□□□□ -0.61
SDHC-208ENST00000513009 ZPR1O75312 459 aa11.22□□□□□ -0.61
SDHC-208ENST00000513009 LMNB1P20700 586 aa11.22□□□□□ -0.61
SDHC-208ENST00000513009 MRC1P22897 1456 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms