RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 C16orf46Q6P387 395 aa10.01□□□□□ -0.81
CHD1-209ENST00000512844 NSFL1CQ9UNZ2 370 aaKnown RBP10.01□□□□□ -0.81
CHD1-209ENST00000512844 PCDHGC4Q9Y5F7 938 aa10.01□□□□□ -0.81
CHD1-209ENST00000512844 DGKZQ13574 1117 aa10□□□□□ -0.81
CHD1-209ENST00000512844 ZCCHC2Q9C0B9 1178 aaKnown RBP10□□□□□ -0.81
CHD1-209ENST00000512844 GPR25O00155 361 aa9.99□□□□□ -0.81
CHD1-209ENST00000512844 KHNYNO15037 678 aaKnown RBP9.99□□□□□ -0.81
CHD1-209ENST00000512844 NAA30Q147X3 362 aaPredicted RBP9.99□□□□□ -0.81
CHD1-209ENST00000512844 C11orf91Q3C1V1 193 aa9.99□□□□□ -0.81
CHD1-209ENST00000512844 MYO19Q96H55 970 aa9.99□□□□□ -0.81
CHD1-209ENST00000512844 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
CHD1-209ENST00000512844 CEP63Q96MT8 703 aa9.99□□□□□ -0.81
CHD1-209ENST00000512844 QTRT2Q9H974 415 aaKnown RBP9.99□□□□□ -0.81
CHD1-209ENST00000512844 ATXN7L1Q9ULK2 861 aaPredicted RBP9.99□□□□□ -0.81
CHD1-209ENST00000512844 SAMD5Q5TGI4 173 aa9.98□□□□□ -0.81
CHD1-209ENST00000512844 HSH2DQ96JZ2 352 aa9.98□□□□□ -0.81
CHD1-209ENST00000512844 CFHR5Q9BXR6 569 aa9.98□□□□□ -0.81
CHD1-209ENST00000512844 SLAIN2Q9P270 581 aa9.98□□□□□ -0.81
CHD1-209ENST00000512844 ERBB4Q15303 1308 aa9.98□□□□□ -0.81
CHD1-209ENST00000512844 DCDC2BA2VCK2 349 aa9.97□□□□□ -0.81
CHD1-209ENST00000512844 PDIA4P13667 645 aaKnown RBP9.97□□□□□ -0.81
CHD1-209ENST00000512844 ABHD17AQ96GS6 310 aa9.97□□□□□ -0.81
CHD1-209ENST00000512844 COL25A1Q9BXS0 654 aaPredicted RBP9.97□□□□□ -0.81
CHD1-209ENST00000512844 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
CHD1-209ENST00000512844 TGFBR3LH3BV60 316 aa9.96□□□□□ -0.82
CHD1-209ENST00000512844 FAM157BP0CG42 384 aa9.96□□□□□ -0.82
CHD1-209ENST00000512844 EPB42P16452 691 aa9.96□□□□□ -0.82
CHD1-209ENST00000512844 MX2P20592 715 aa9.96□□□□□ -0.82
CHD1-209ENST00000512844 BRD2P25440 801 aaKnown RBP9.96□□□□□ -0.82
CHD1-209ENST00000512844 ARID4AP29374 1257 aaPredicted RBP9.96□□□□□ -0.82
CHD1-209ENST00000512844 COX20Q5RI15 118 aa9.95□□□□□ -0.82
CHD1-209ENST00000512844 IER5Q5VY09 327 aa9.95□□□□□ -0.82
CHD1-209ENST00000512844 IFT43Q96FT9 208 aa9.95□□□□□ -0.82
CHD1-209ENST00000512844 BNIP3LO60238 219 aa9.94□□□□□ -0.82
CHD1-209ENST00000512844 BRD1O95696 1058 aa9.94□□□□□ -0.82
CHD1-209ENST00000512844 ABL1P00519 1130 aa9.94□□□□□ -0.82
CHD1-209ENST00000512844 FGFR3P22607 806 aa9.94□□□□□ -0.82
CHD1-209ENST00000512844 GMPRP36959 345 aa9.94□□□□□ -0.82
CHD1-209ENST00000512844 LCE2AQ5TA79 106 aaPredicted RBP9.94□□□□□ -0.82
CHD1-209ENST00000512844 GPR161Q8N6U8 529 aaKnown RBP9.94□□□□□ -0.82
CHD1-209ENST00000512844 ABTB2Q8N961 1025 aa9.94□□□□□ -0.82
CHD1-209ENST00000512844 ZNF280CQ8ND82 737 aa9.94□□□□□ -0.82
CHD1-209ENST00000512844 MBIPQ9NS73 344 aa9.94□□□□□ -0.82
CHD1-209ENST00000512844 SEPT3Q9UH03 358 aa9.94□□□□□ -0.82
CHD1-209ENST00000512844 MAPTP10636 758 aaKnown RBP9.93□□□□□ -0.82
CHD1-209ENST00000512844 LAMC2Q13753 1193 aa9.93□□□□□ -0.82
CHD1-209ENST00000512844 BTLAQ7Z6A9 289 aa9.93□□□□□ -0.82
CHD1-209ENST00000512844 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
CHD1-209ENST00000512844 CNTNAP3BQ96NU0 1288 aa9.93□□□□□ -0.82
CHD1-209ENST00000512844 CNTNAP3Q9BZ76 1288 aa9.93□□□□□ -0.82
CHD1-209ENST00000512844 BRD7Q9NPI1 651 aa9.93□□□□□ -0.82
CHD1-209ENST00000512844 PATL2C9JE40 543 aaKnown RBP9.92□□□□□ -0.82
CHD1-209ENST00000512844 THBS1P07996 1170 aa9.92□□□□□ -0.82
CHD1-209ENST00000512844 BMP4P12644 408 aa9.92□□□□□ -0.82
CHD1-209ENST00000512844 NEUROD1Q13562 356 aa9.92□□□□□ -0.82
CHD1-209ENST00000512844 CAPN12Q6ZSI9 719 aa9.92□□□□□ -0.82
CHD1-209ENST00000512844 GTF3C2Q8WUA4 911 aaPredicted RBP9.92□□□□□ -0.82
CHD1-209ENST00000512844 C7orf43Q8WVR3 580 aa9.92□□□□□ -0.82
CHD1-209ENST00000512844 SAP130Q9H0E3 1048 aa9.92□□□□□ -0.82
CHD1-209ENST00000512844 FAM13BQ9NYF5 915 aa9.92□□□□□ -0.82
CHD1-209ENST00000512844 MARK1Q9P0L2 795 aa9.92□□□□□ -0.82
CHD1-209ENST00000512844 STIM2Q9P246 746 aa9.92□□□□□ -0.82
CHD1-209ENST00000512844 MAP2K3P46734 347 aa9.91□□□□□ -0.82
CHD1-209ENST00000512844 ARSDP51689 593 aa9.91□□□□□ -0.82
CHD1-209ENST00000512844 TNP2Q05952 138 aa9.91□□□□□ -0.82
CHD1-209ENST00000512844 HELQQ8TDG4 1101 aa9.91□□□□□ -0.82
CHD1-209ENST00000512844 TRAIPQ9BWF2 469 aa9.91□□□□□ -0.82
CHD1-209ENST00000512844 LRFN2Q9ULH4 789 aa9.91□□□□□ -0.82
CHD1-209ENST00000512844 PRR12Q9ULL5 1215 aa9.91□□□□□ -0.82
CHD1-209ENST00000512844 MICAL2O94851 1124 aa9.9□□□□□ -0.82
CHD1-209ENST00000512844 IDH3AP50213 366 aa9.9□□□□□ -0.82
CHD1-209ENST00000512844 TYRO3Q06418 890 aa9.9□□□□□ -0.82
CHD1-209ENST00000512844 UBAP2LQ14157 1087 aaKnown RBP9.9□□□□□ -0.82
CHD1-209ENST00000512844 TREML1Q86YW5 311 aa9.9□□□□□ -0.82
CHD1-209ENST00000512844 NDFIP2Q9NV92 336 aa9.9□□□□□ -0.82
CHD1-209ENST00000512844 KCNH4Q9UQ05 1017 aa9.9□□□□□ -0.82
CHD1-209ENST00000512844 CD33P20138 364 aa9.89□□□□□ -0.83
CHD1-209ENST00000512844 SCNN1AP37088 669 aa9.89□□□□□ -0.83
CHD1-209ENST00000512844 SF3B2Q13435 895 aaKnown RBP9.89□□□□□ -0.83
CHD1-209ENST00000512844 AAMPQ13685 434 aa9.89□□□□□ -0.83
CHD1-209ENST00000512844 PHLDB3Q6NSJ2 640 aa9.89□□□□□ -0.83
CHD1-209ENST00000512844 HOMEZQ8IX15 550 aa9.89□□□□□ -0.83
CHD1-209ENST00000512844 SRSF11Q05519 484 aaKnown RBP9.88□□□□□ -0.83
CHD1-209ENST00000512844 GAS6Q14393 721 aa9.88□□□□□ -0.83
CHD1-209ENST00000512844 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
CHD1-209ENST00000512844 EFSO43281 561 aa9.87□□□□□ -0.83
CHD1-209ENST00000512844 PCSK2P16519 638 aa9.87□□□□□ -0.83
CHD1-209ENST00000512844 RNFT1Q5M7Z0 435 aa9.87□□□□□ -0.83
CHD1-209ENST00000512844 ALKBH2Q6NS38 261 aa9.87□□□□□ -0.83
CHD1-209ENST00000512844 KLRG1Q96E93 195 aa9.87□□□□□ -0.83
CHD1-209ENST00000512844 PNMA5Q96PV4 448 aa9.87□□□□□ -0.83
CHD1-209ENST00000512844 BCS1LQ9Y276 419 aa9.87□□□□□ -0.83
CHD1-209ENST00000512844 IGF1RP08069 1367 aa9.87□□□□□ -0.83
CHD1-209ENST00000512844 FAM13AO94988 1023 aa9.86□□□□□ -0.83
CHD1-209ENST00000512844 INSM1Q01101 510 aaPredicted RBP9.86□□□□□ -0.83
CHD1-209ENST00000512844 KCNA1Q09470 495 aa9.86□□□□□ -0.83
CHD1-209ENST00000512844 FAM182BQ5T319 152 aa9.86□□□□□ -0.83
CHD1-209ENST00000512844 GLYCTKQ8IVS8 523 aa9.86□□□□□ -0.83
CHD1-209ENST00000512844 DNMT3AQ9Y6K1 912 aaPredicted RBP9.86□□□□□ -0.83
CHD1-209ENST00000512844 TNFRSF10BO14763 440 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms