RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 RIC3Q7Z5B4 369 aa22.79■■□□□ 1.24
NME1-210ENST00000512768 MAP3K2Q9Y2U5 619 aa22.79■■□□□ 1.24
NME1-210ENST00000512768 ABCC4O15439 1325 aa22.79■■□□□ 1.24
NME1-210ENST00000512768 A0A087WZG4 1122 aa22.78■■□□□ 1.24
NME1-210ENST00000512768 UBR3Q6ZT12 1888 aa22.78■■□□□ 1.24
NME1-210ENST00000512768 SMIM5Q71RC9 77 aa22.78■■□□□ 1.24
NME1-210ENST00000512768 DZIP3Q86Y13 1208 aaKnown RBP22.78■■□□□ 1.24
NME1-210ENST00000512768 PLBD2Q8NHP8 589 aa22.78■■□□□ 1.24
NME1-210ENST00000512768 TBC1D2BQ9UPU7 963 aa22.78■■□□□ 1.24
NME1-210ENST00000512768 NUP188Q5SRE5 1749 aa22.77■■□□□ 1.24
NME1-210ENST00000512768 NEFLP07196 543 aa22.77■■□□□ 1.24
NME1-210ENST00000512768 ZNF827Q17R98 1081 aa22.77■■□□□ 1.24
NME1-210ENST00000512768 SLC4A10Q6U841 1118 aa22.77■■□□□ 1.24
NME1-210ENST00000512768 AMIGO3Q86WK7 504 aa22.77■■□□□ 1.24
NME1-210ENST00000512768 DNAAF4Q8WXU2 420 aa22.77■■□□□ 1.24
NME1-210ENST00000512768 AKT1S1Q96B36 256 aa22.77■■□□□ 1.24
NME1-210ENST00000512768 ZBTB3Q9H5J0 574 aa22.77■■□□□ 1.24
NME1-210ENST00000512768 ARFGEF2Q9Y6D5 1785 aa22.76■■□□□ 1.23
NME1-210ENST00000512768 PHF14O94880 888 aa22.76■■□□□ 1.23
NME1-210ENST00000512768 TMEM57Q8N5G2 664 aa22.76■■□□□ 1.23
NME1-210ENST00000512768 MAP3K15Q6ZN16 1313 aa22.76■■□□□ 1.23
NME1-210ENST00000512768 ADRA2BP18089 450 aa22.74■■□□□ 1.23
NME1-210ENST00000512768 TRAPPC3LQ5T215 181 aa22.74■■□□□ 1.23
NME1-210ENST00000512768 TFCP2L1Q9NZI6 479 aa22.74■■□□□ 1.23
NME1-210ENST00000512768 PXDNLA1KZ92 1463 aa22.73■■□□□ 1.23
NME1-210ENST00000512768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.73■■□□□ 1.23
NME1-210ENST00000512768 SSFA2P28290 1259 aa22.73■■□□□ 1.23
NME1-210ENST00000512768 ARHGEF1Q92888 912 aaKnown RBP22.73■■□□□ 1.23
NME1-210ENST00000512768 METTL22Q9BUU2 404 aaPredicted RBP22.73■■□□□ 1.23
NME1-210ENST00000512768 ANO8Q9HCE9 1232 aaPredicted RBP22.73■■□□□ 1.23
NME1-210ENST00000512768 STK32BQ9NY57 414 aa22.73■■□□□ 1.23
NME1-210ENST00000512768 COG6Q9Y2V7 657 aa22.73■■□□□ 1.23
NME1-210ENST00000512768 ERVV-1B6SEH8 477 aa22.72■■□□□ 1.23
NME1-210ENST00000512768 CAMTA2O94983 1202 aa22.72■■□□□ 1.23
NME1-210ENST00000512768 CCT4P50991 539 aaKnown RBP22.72■■□□□ 1.23
NME1-210ENST00000512768 INTS3Q68E01 1043 aaKnown RBP22.72■■□□□ 1.23
NME1-210ENST00000512768 ITPRIPQ8IWB1 547 aa22.72■■□□□ 1.23
NME1-210ENST00000512768 CRBNQ96SW2 442 aa22.72■■□□□ 1.23
NME1-210ENST00000512768 MYD88Q99836 296 aa22.72■■□□□ 1.23
NME1-210ENST00000512768 TUBGCP6Q96RT7 1819 aa22.72■■□□□ 1.23
NME1-210ENST00000512768 RFC4P35249 363 aa22.71■■□□□ 1.23
NME1-210ENST00000512768 NEXNQ0ZGT2 675 aa22.71■■□□□ 1.23
NME1-210ENST00000512768 HLFQ16534 295 aa22.71■■□□□ 1.23
NME1-210ENST00000512768 NARFQ9UHQ1 456 aa22.71■■□□□ 1.23
NME1-210ENST00000512768 C4AP0C0L4 1744 aa22.71■■□□□ 1.23
NME1-210ENST00000512768 N4BP2Q86UW6 1770 aaPredicted RBP22.71■■□□□ 1.23
NME1-210ENST00000512768 ZPR1O75312 459 aa22.7■■□□□ 1.22
NME1-210ENST00000512768 MVPQ14764 893 aaKnown RBP22.7■■□□□ 1.22
NME1-210ENST00000512768 SLC15A2Q16348 729 aa22.7■■□□□ 1.22
NME1-210ENST00000512768 BEND3Q5T5X7 828 aa22.7■■□□□ 1.22
NME1-210ENST00000512768 GIGYF2Q6Y7W6 1299 aaKnown RBP22.7■■□□□ 1.22
NME1-210ENST00000512768 SRCIN1Q9C0H9 1055 aa22.7■■□□□ 1.22
NME1-210ENST00000512768 SRP68Q9UHB9 627 aaKnown RBP22.7■■□□□ 1.22
NME1-210ENST00000512768 ATP10DQ9P241 1426 aa22.7■■□□□ 1.22
NME1-210ENST00000512768 BCORQ6W2J9 1755 aa22.7■■□□□ 1.22
NME1-210ENST00000512768 NUP98P52948 1817 aa22.7■■□□□ 1.22
NME1-210ENST00000512768 SCN7AQ01118 1682 aa22.68■■□□□ 1.22
NME1-210ENST00000512768 TCIRG1Q13488 830 aa22.68■■□□□ 1.22
NME1-210ENST00000512768 FKBP8Q14318 412 aa22.68■■□□□ 1.22
NME1-210ENST00000512768 HSP90AB3PQ58FF7 597 aa22.68■■□□□ 1.22
NME1-210ENST00000512768 USPL1Q5W0Q7 1092 aa22.68■■□□□ 1.22
NME1-210ENST00000512768 FLAD1Q8NFF5 587 aa22.68■■□□□ 1.22
NME1-210ENST00000512768 LINS1Q8NG48 757 aa22.68■■□□□ 1.22
NME1-210ENST00000512768 USP42Q9H9J4 1324 aaKnown RBP22.67■■□□□ 1.22
NME1-210ENST00000512768 ATP5J2-PTCD1G3V325 749 aa22.67■■□□□ 1.22
NME1-210ENST00000512768 IGKV5-2P06315 115 aa22.67■■□□□ 1.22
NME1-210ENST00000512768 EXOC6Q8TAG9 804 aa22.67■■□□□ 1.22
NME1-210ENST00000512768 ZNF652Q9Y2D9 606 aa22.67■■□□□ 1.22
NME1-210ENST00000512768 AFDNP55196 1824 aaKnown RBP22.66■■□□□ 1.22
NME1-210ENST00000512768 ANKRD36CQ5JPF3 1778 aa22.66■■□□□ 1.22
NME1-210ENST00000512768 ALDH1L1O75891 902 aa22.66■■□□□ 1.22
NME1-210ENST00000512768 CWF19L2Q2TBE0 894 aaKnown RBP22.66■■□□□ 1.22
NME1-210ENST00000512768 COL23A1Q86Y22 540 aaPredicted RBP22.66■■□□□ 1.22
NME1-210ENST00000512768 DDX19BQ9UMR2 479 aa22.66■■□□□ 1.22
NME1-210ENST00000512768 PNPLA7Q6ZV29 1317 aa22.65■■□□□ 1.22
NME1-210ENST00000512768 NEURL1BA8MQ27 555 aa22.65■■□□□ 1.22
NME1-210ENST00000512768 RGL2O15211 777 aa22.65■■□□□ 1.22
NME1-210ENST00000512768 MSH5O43196 834 aa22.65■■□□□ 1.22
NME1-210ENST00000512768 CLEC4GQ6UXB4 293 aa22.65■■□□□ 1.22
NME1-210ENST00000512768 ISCA1Q9BUE6 129 aa22.65■■□□□ 1.22
NME1-210ENST00000512768 QSER1Q2KHR3 1735 aa22.65■■□□□ 1.22
NME1-210ENST00000512768 GPTP24298 496 aa22.64■■□□□ 1.21
NME1-210ENST00000512768 BCL2L12Q9HB09 334 aa22.64■■□□□ 1.21
NME1-210ENST00000512768 ZBTB7BO15156 539 aaPredicted RBP22.62■■□□□ 1.21
NME1-210ENST00000512768 TRIM28Q13263 835 aaKnown RBP22.62■■□□□ 1.21
NME1-210ENST00000512768 ZNF34Q8IZ26 560 aa22.62■■□□□ 1.21
NME1-210ENST00000512768 CCDC191Q8NCU4 936 aa22.62■■□□□ 1.21
NME1-210ENST00000512768 CWC25Q9NXE8 425 aaPredicted RBP22.62■■□□□ 1.21
NME1-210ENST00000512768 GCKRQ14397 625 aa22.61■■□□□ 1.21
NME1-210ENST00000512768 CHMP4BQ9H444 224 aaKnown RBP22.61■■□□□ 1.21
NME1-210ENST00000512768 NIP7Q9Y221 180 aaKnown RBP eCLIP22.61■■□□□ 1.21
NME1-210ENST00000512768 GYS1P13807 737 aa22.6■■□□□ 1.21
NME1-210ENST00000512768 TBC1D9BQ66K14 1250 aa22.6■■□□□ 1.21
NME1-210ENST00000512768 NLRP10Q86W26 655 aa22.6■■□□□ 1.21
NME1-210ENST00000512768 MEIS3Q99687 375 aa22.6■■□□□ 1.21
NME1-210ENST00000512768 USP44Q9H0E7 712 aa22.6■■□□□ 1.21
NME1-210ENST00000512768 C9orf78Q9NZ63 289 aaPredicted RBP22.6■■□□□ 1.21
NME1-210ENST00000512768 IBTKQ9P2D0 1353 aaPredicted RBP22.6■■□□□ 1.21
NME1-210ENST00000512768 UBN2Q6ZU65 1347 aa22.59■■□□□ 1.21
NME1-210ENST00000512768 BICDL1Q6ZP65 573 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms