RNA–Protein interactions for RNA: ENST00000512694.5

DDR1-268, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-268ENST00000512694 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
DDR1-268ENST00000512694 PRAMEF22A3QJZ6 481 aa21.34■■□□□ 1.01
DDR1-268ENST00000512694 ST5P78524 1137 aa21.34■■□□□ 1.01
DDR1-268ENST00000512694 PRPF40BQ6NWY9 871 aaKnown RBP21.34■■□□□ 1.01
DDR1-268ENST00000512694 TNS4Q8IZW8 715 aa21.34■■□□□ 1.01
DDR1-268ENST00000512694 TAOK3Q9H2K8 898 aa21.34■■□□□ 1.01
DDR1-268ENST00000512694 CEMIPQ8WUJ3 1361 aa21.34■■□□□ 1.01
DDR1-268ENST00000512694 HSPA1AP0DMV8 641 aaKnown RBP21.33■■□□□ 1.01
DDR1-268ENST00000512694 HSPA1BP0DMV9 641 aaKnown RBP21.33■■□□□ 1.01
DDR1-268ENST00000512694 PDZRN3Q9UPQ7 1066 aa21.32■■□□□ 1
DDR1-268ENST00000512694 USP16Q9Y5T5 823 aa21.32■■□□□ 1
DDR1-268ENST00000512694 DDNO94850 711 aaPredicted RBP21.31■■□□□ 1
DDR1-268ENST00000512694 POTEIP0CG38 1075 aa21.31■■□□□ 1
DDR1-268ENST00000512694 POTEJP0CG39 1038 aa21.31■■□□□ 1
DDR1-268ENST00000512694 CNKSR1Q969H4 720 aa21.31■■□□□ 1
DDR1-268ENST00000512694 RSPH6AQ9H0K4 717 aa21.31■■□□□ 1
DDR1-268ENST00000512694 DLG5Q8TDM6 1919 aa21.31■■□□□ 1
DDR1-268ENST00000512694 SCN4AP35499 1836 aa21.3■■□□□ 1
DDR1-268ENST00000512694 SRGNP10124 158 aa21.3■■□□□ 1
DDR1-268ENST00000512694 STYK1Q6J9G0 422 aa21.3■■□□□ 1
DDR1-268ENST00000512694 NBPF5PQ86XG9 351 aaPredicted RBP21.3■■□□□ 1
DDR1-268ENST00000512694 LAMB4A4D0S4 1761 aa21.3■■□□□ 1
DDR1-268ENST00000512694 LTBP3Q9NS15 1303 aa21.29■■□□□ 1
DDR1-268ENST00000512694 FAM177BA6PVY3 158 aa21.29■■□□□ 1
DDR1-268ENST00000512694 PPP2R1AP30153 589 aa21.29■■□□□ 1
DDR1-268ENST00000512694 MCM10Q7L590 875 aa21.29■■□□□ 1
DDR1-268ENST00000512694 MASTLQ96GX5 879 aa21.28■■□□□ 1
DDR1-268ENST00000512694 MKRN1Q9UHC7 482 aaKnown RBP21.28■■□□□ 1
DDR1-268ENST00000512694 DCTN1Q14203 1278 aa21.27■■□□□ 1
DDR1-268ENST00000512694 CHADLQ6NUI6 762 aa21.27■■□□□ 1
DDR1-268ENST00000512694 NUP98P52948 1817 aa21.27■□□□□ 0.99
DDR1-268ENST00000512694 U2AF1L5P0DN76 240 aaPredicted RBP21.26■□□□□ 0.99
DDR1-268ENST00000512694 U2AF1Q01081 240 aaKnown RBP eCLIP21.26■□□□□ 0.99
DDR1-268ENST00000512694 OLFM4Q6UX06 510 aa21.26■□□□□ 0.99
DDR1-268ENST00000512694 RTF1Q92541 710 aaKnown RBP21.26■□□□□ 0.99
DDR1-268ENST00000512694 SOGA3Q5TF21 947 aa21.25■□□□□ 0.99
DDR1-268ENST00000512694 SNRPA1P09661 255 aaKnown RBP21.24■□□□□ 0.99
DDR1-268ENST00000512694 ZNF652Q9Y2D9 606 aa21.24■□□□□ 0.99
DDR1-268ENST00000512694 CCDC93Q567U6 631 aa21.23■□□□□ 0.99
DDR1-268ENST00000512694 ZNF277Q9NRM2 450 aaPredicted RBP21.23■□□□□ 0.99
DDR1-268ENST00000512694 NIP7Q9Y221 180 aaKnown RBP eCLIP21.23■□□□□ 0.99
DDR1-268ENST00000512694 ZNF541Q9H0D2 1346 aa21.23■□□□□ 0.99
DDR1-268ENST00000512694 NBPF26B4DH59 902 aa21.22■□□□□ 0.99
DDR1-268ENST00000512694 NEFMP07197 916 aa21.22■□□□□ 0.99
DDR1-268ENST00000512694 NPR1P16066 1061 aa21.22■□□□□ 0.99
DDR1-268ENST00000512694 NBPF10Q6P3W6 841 aaKnown RBP21.22■□□□□ 0.99
DDR1-268ENST00000512694 NBPF15Q8N660 670 aa21.22■□□□□ 0.99
DDR1-268ENST00000512694 CREBZFQ9NS37 354 aa21.22■□□□□ 0.99
DDR1-268ENST00000512694 KDM3BQ7LBC6 1761 aa21.22■□□□□ 0.99
DDR1-268ENST00000512694 EAPPQ56P03 285 aaPredicted RBP21.21■□□□□ 0.99
DDR1-268ENST00000512694 CLEC4GQ6UXB4 293 aa21.21■□□□□ 0.99
DDR1-268ENST00000512694 C7orf43Q8WVR3 580 aa21.21■□□□□ 0.99
DDR1-268ENST00000512694 MIS18AQ9NYP9 233 aa21.2■□□□□ 0.98
DDR1-268ENST00000512694 IQCA1LA6NCM1 817 aa21.19■□□□□ 0.98
DDR1-268ENST00000512694 FKBP4Q02790 459 aaKnown RBP eCLIP21.19■□□□□ 0.98
DDR1-268ENST00000512694 HLFQ16534 295 aa21.19■□□□□ 0.98
DDR1-268ENST00000512694 TPTE2Q6XPS3 522 aa21.19■□□□□ 0.98
DDR1-268ENST00000512694 NGEFQ8N5V2 710 aa21.19■□□□□ 0.98
DDR1-268ENST00000512694 TAF1DQ9H5J8 278 aaPredicted RBP21.19■□□□□ 0.98
DDR1-268ENST00000512694 LDHDQ86WU2 507 aa21.18■□□□□ 0.98
DDR1-268ENST00000512694 ADAMTSL1Q8N6G6 1762 aa21.18■□□□□ 0.98
DDR1-268ENST00000512694 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
DDR1-268ENST00000512694 L3MBTL3Q96JM7 780 aaPredicted RBP21.17■□□□□ 0.98
DDR1-268ENST00000512694 CNTNAP1P78357 1384 aa21.16■□□□□ 0.98
DDR1-268ENST00000512694 ABCC12Q96J65 1359 aa21.16■□□□□ 0.98
DDR1-268ENST00000512694 CLEC11AQ9Y240 323 aa21.16■□□□□ 0.98
DDR1-268ENST00000512694 RNF123Q5XPI4 1314 aa21.15■□□□□ 0.98
DDR1-268ENST00000512694 PASKQ96RG2 1323 aa21.15■□□□□ 0.98
DDR1-268ENST00000512694 KLRG2A4D1S0 409 aaPredicted RBP21.14■□□□□ 0.97
DDR1-268ENST00000512694 FOXN1O15353 648 aa21.14■□□□□ 0.97
DDR1-268ENST00000512694 RALBP1Q15311 655 aa21.14■□□□□ 0.97
DDR1-268ENST00000512694 NUTM1Q86Y26 1132 aa21.14■□□□□ 0.97
DDR1-268ENST00000512694 PNNQ9H307 717 aaKnown RBP21.14■□□□□ 0.97
DDR1-268ENST00000512694 HACL1Q9UJ83 578 aa21.14■□□□□ 0.97
DDR1-268ENST00000512694 COL4A5P29400 1685 aa21.13■□□□□ 0.97
DDR1-268ENST00000512694 TAF7Q15545 349 aaPredicted RBP21.13■□□□□ 0.97
DDR1-268ENST00000512694 RTKN2Q8IZC4 609 aa21.13■□□□□ 0.97
DDR1-268ENST00000512694 SYNE4Q8N205 404 aa21.13■□□□□ 0.97
DDR1-268ENST00000512694 HTATSF1O43719 755 aaKnown RBP21.12■□□□□ 0.97
DDR1-268ENST00000512694 EPHX2P34913 555 aa21.12■□□□□ 0.97
DDR1-268ENST00000512694 IARSP41252 1262 aaKnown RBP21.12■□□□□ 0.97
DDR1-268ENST00000512694 SLC51AQ86UW1 340 aa21.12■□□□□ 0.97
DDR1-268ENST00000512694 TMEM88BA6NKF7 163 aa21.11■□□□□ 0.97
DDR1-268ENST00000512694 GPTP24298 496 aa21.11■□□□□ 0.97
DDR1-268ENST00000512694 VEGFBP49765 207 aa21.11■□□□□ 0.97
DDR1-268ENST00000512694 RRP7AQ9Y3A4 280 aaKnown RBP21.11■□□□□ 0.97
DDR1-268ENST00000512694 LTBP1Q14766 1721 aa21.11■□□□□ 0.97
DDR1-268ENST00000512694 ITGBL1O95965 494 aaPredicted RBP21.1■□□□□ 0.97
DDR1-268ENST00000512694 MYL6BP14649 208 aa21.1■□□□□ 0.97
DDR1-268ENST00000512694 ALDH1B1P30837 517 aa21.1■□□□□ 0.97
DDR1-268ENST00000512694 MAP1SQ66K74 1059 aaPredicted RBP21.1■□□□□ 0.97
DDR1-268ENST00000512694 TTLL7Q6ZT98 887 aa21.1■□□□□ 0.97
DDR1-268ENST00000512694 THUMPD2Q9BTF0 503 aaKnown RBP21.1■□□□□ 0.97
DDR1-268ENST00000512694 GJA3Q9Y6H8 435 aa21.1■□□□□ 0.97
DDR1-268ENST00000512694 TRPM7Q96QT4 1865 aa21.09■□□□□ 0.97
DDR1-268ENST00000512694 MAPK8IP3Q9UPT6 1336 aa21.09■□□□□ 0.97
DDR1-268ENST00000512694 TCERG1O14776 1098 aaKnown RBP21.09■□□□□ 0.97
DDR1-268ENST00000512694 AIDAQ96BJ3 306 aa21.09■□□□□ 0.97
DDR1-268ENST00000512694 NYXQ9GZU5 481 aa21.09■□□□□ 0.97
DDR1-268ENST00000512694 ZBTB3Q9H5J0 574 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms