RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 FBLN1P23142 703 aa12.11□□□□□ -0.47
MSH3-203ENST00000512531 RRS1Q15050 365 aaKnown RBP12.11□□□□□ -0.47
MSH3-203ENST00000512531 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
MSH3-203ENST00000512531 CHMP4BQ9H444 224 aaKnown RBP12.11□□□□□ -0.47
MSH3-203ENST00000512531 C5P01031 1676 aa12.1□□□□□ -0.47
MSH3-203ENST00000512531 HSP90AB2PQ58FF8 381 aa12.1□□□□□ -0.47
MSH3-203ENST00000512531 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
MSH3-203ENST00000512531 ZNF428Q96B54 188 aa12.1□□□□□ -0.47
MSH3-203ENST00000512531 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
MSH3-203ENST00000512531 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
MSH3-203ENST00000512531 SPDYE16A6NNV3 312 aaPredicted RBP12.09□□□□□ -0.47
MSH3-203ENST00000512531 CYP27B1O15528 508 aa12.09□□□□□ -0.47
MSH3-203ENST00000512531 GOLGB1Q14789 3259 aaKnown RBP12.09□□□□□ -0.47
MSH3-203ENST00000512531 SSFA2P28290 1259 aa12.08□□□□□ -0.48
MSH3-203ENST00000512531 FOXK1P85037 733 aa12.08□□□□□ -0.48
MSH3-203ENST00000512531 USHBP1Q8N6Y0 703 aa12.08□□□□□ -0.48
MSH3-203ENST00000512531 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
MSH3-203ENST00000512531 FAM117AQ9C073 453 aa12.08□□□□□ -0.48
MSH3-203ENST00000512531 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.48
MSH3-203ENST00000512531 ADCY9O60503 1353 aa12.07□□□□□ -0.48
MSH3-203ENST00000512531 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
MSH3-203ENST00000512531 PLIN1O60240 522 aa12.07□□□□□ -0.48
MSH3-203ENST00000512531 TMPOP42166 694 aaKnown RBP12.07□□□□□ -0.48
MSH3-203ENST00000512531 MPRIPQ6WCQ1 1025 aa12.07□□□□□ -0.48
MSH3-203ENST00000512531 SPG7Q9UQ90 795 aa12.07□□□□□ -0.48
MSH3-203ENST00000512531 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
MSH3-203ENST00000512531 C4BP0C0L5 1744 aa12.06□□□□□ -0.48
MSH3-203ENST00000512531 ATP10DQ9P241 1426 aa12.06□□□□□ -0.48
MSH3-203ENST00000512531 PPM1GO15355 546 aaPredicted RBP12.06□□□□□ -0.48
MSH3-203ENST00000512531 MSL1Q68DK7 614 aa12.06□□□□□ -0.48
MSH3-203ENST00000512531 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
MSH3-203ENST00000512531 ITGB4P16144 1822 aa12.05□□□□□ -0.48
MSH3-203ENST00000512531 RIPK4P57078 832 aa12.05□□□□□ -0.48
MSH3-203ENST00000512531 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
MSH3-203ENST00000512531 PIGBQ92521 554 aa12.05□□□□□ -0.48
MSH3-203ENST00000512531 RRP7AQ9Y3A4 280 aaKnown RBP12.05□□□□□ -0.48
MSH3-203ENST00000512531 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
MSH3-203ENST00000512531 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
MSH3-203ENST00000512531 KIF3CO14782 793 aa12.04□□□□□ -0.48
MSH3-203ENST00000512531 SIK1P57059 783 aa12.04□□□□□ -0.48
MSH3-203ENST00000512531 IFFO2Q5TF58 517 aa12.04□□□□□ -0.48
MSH3-203ENST00000512531 PLEKHF1Q96S99 279 aa12.04□□□□□ -0.48
MSH3-203ENST00000512531 POLKQ9UBT6 870 aa12.04□□□□□ -0.48
MSH3-203ENST00000512531 KIF16BQ96L93 1317 aa12.04□□□□□ -0.48
MSH3-203ENST00000512531 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
MSH3-203ENST00000512531 TOGARAM1Q9Y4F4 1720 aa12.03□□□□□ -0.48
MSH3-203ENST00000512531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
MSH3-203ENST00000512531 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
MSH3-203ENST00000512531 GNAI1P63096 354 aa12.03□□□□□ -0.48
MSH3-203ENST00000512531 ZKSCAN2Q63HK3 967 aa12.03□□□□□ -0.48
MSH3-203ENST00000512531 PLPP6Q8IY26 295 aa12.03□□□□□ -0.48
MSH3-203ENST00000512531 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
MSH3-203ENST00000512531 ZMYND15Q9H091 742 aa12.03□□□□□ -0.48
MSH3-203ENST00000512531 C2orf72A6NCS6 295 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
MSH3-203ENST00000512531 HSPA6P17066 643 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 NFE2L2Q16236 605 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 FRAT1Q92837 279 aaPredicted RBP12.02□□□□□ -0.49
MSH3-203ENST00000512531 CLUAP1Q96AJ1 413 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 TMOD3Q9NYL9 352 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 EMILIN1Q9Y6C2 1016 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 CEP350Q5VT06 3117 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
MSH3-203ENST00000512531 CICQ96RK0 1608 aaPredicted RBP12.01□□□□□ -0.49
MSH3-203ENST00000512531 PHKG2P15735 406 aa12.01□□□□□ -0.49
MSH3-203ENST00000512531 FECHP22830 423 aa12.01□□□□□ -0.49
MSH3-203ENST00000512531 PRKAR2BP31323 418 aa12.01□□□□□ -0.49
MSH3-203ENST00000512531 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
MSH3-203ENST00000512531 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
MSH3-203ENST00000512531 EYA1Q99502 592 aa12.01□□□□□ -0.49
MSH3-203ENST00000512531 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
MSH3-203ENST00000512531 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
MSH3-203ENST00000512531 ERVV-2B6SEH9 535 aa12□□□□□ -0.49
MSH3-203ENST00000512531 BCAR3O75815 825 aa12□□□□□ -0.49
MSH3-203ENST00000512531 OSBPP22059 807 aa12□□□□□ -0.49
MSH3-203ENST00000512531 TGFB2P61812 414 aa12□□□□□ -0.49
MSH3-203ENST00000512531 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
MSH3-203ENST00000512531 LINC00116Q8NCU8 138 aa12□□□□□ -0.49
MSH3-203ENST00000512531 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
MSH3-203ENST00000512531 RWDD1Q9H446 243 aaPredicted RBP12□□□□□ -0.49
MSH3-203ENST00000512531 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
MSH3-203ENST00000512531 DDX19BQ9UMR2 479 aa12□□□□□ -0.49
MSH3-203ENST00000512531 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
MSH3-203ENST00000512531 HSP90AB1P08238 724 aaKnown RBP11.99□□□□□ -0.49
MSH3-203ENST00000512531 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
MSH3-203ENST00000512531 DZIP1LQ8IYY4 767 aaKnown RBP11.99□□□□□ -0.49
MSH3-203ENST00000512531 NLGN1Q8N2Q7 840 aa11.99□□□□□ -0.49
MSH3-203ENST00000512531 ANP32EQ9BTT0 268 aa11.99□□□□□ -0.49
MSH3-203ENST00000512531 C1orf115Q9H7X2 142 aa11.99□□□□□ -0.49
MSH3-203ENST00000512531 IFT57Q9NWB7 429 aa11.99□□□□□ -0.49
MSH3-203ENST00000512531 KIF13BQ9NQT8 1826 aa11.98□□□□□ -0.49
MSH3-203ENST00000512531 KDRP35968 1356 aa11.98□□□□□ -0.49
MSH3-203ENST00000512531 KDM2BQ8NHM5 1336 aa11.98□□□□□ -0.49
MSH3-203ENST00000512531 GNPATO15228 680 aa11.98□□□□□ -0.49
MSH3-203ENST00000512531 PHF14O94880 888 aa11.98□□□□□ -0.49
MSH3-203ENST00000512531 IL13P35225 146 aa11.98□□□□□ -0.49
MSH3-203ENST00000512531 ITPK1Q13572 414 aa11.98□□□□□ -0.49
MSH3-203ENST00000512531 C20orf194Q5TEA3 1177 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms