RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 MAP3K15Q6ZN16 1313 aa20.32■□□□□ 0.84
SGCA-208ENST00000512526 NFIXQ14938 502 aa20.32■□□□□ 0.84
SGCA-208ENST00000512526 HLFQ16534 295 aa20.32■□□□□ 0.84
SGCA-208ENST00000512526 ZBED9Q6R2W3 1325 aa20.31■□□□□ 0.84
SGCA-208ENST00000512526 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
SGCA-208ENST00000512526 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
SGCA-208ENST00000512526 TCERG1O14776 1098 aaKnown RBP20.3■□□□□ 0.84
SGCA-208ENST00000512526 DDR1Q08345 913 aa20.3■□□□□ 0.84
SGCA-208ENST00000512526 KIF6Q6ZMV9 814 aa20.3■□□□□ 0.84
SGCA-208ENST00000512526 POLRMTO00411 1230 aaKnown RBP20.29■□□□□ 0.84
SGCA-208ENST00000512526 AIMP1Q12904 312 aaKnown RBP20.29■□□□□ 0.84
SGCA-208ENST00000512526 PHAXQ9H814 394 aaKnown RBP20.29■□□□□ 0.84
SGCA-208ENST00000512526 COL24A1Q17RW2 1714 aa20.28■□□□□ 0.84
SGCA-208ENST00000512526 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
SGCA-208ENST00000512526 STK31Q9BXU1 1019 aa20.28■□□□□ 0.84
SGCA-208ENST00000512526 ZBTB3Q9H5J0 574 aa20.28■□□□□ 0.84
SGCA-208ENST00000512526 PPP1R1BQ9UD71 204 aaPredicted RBP20.28■□□□□ 0.84
SGCA-208ENST00000512526 ZNF652Q9Y2D9 606 aa20.28■□□□□ 0.84
SGCA-208ENST00000512526 PARP3Q9Y6F1 533 aa20.28■□□□□ 0.84
SGCA-208ENST00000512526 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
SGCA-208ENST00000512526 GIGYF2Q6Y7W6 1299 aaKnown RBP20.27■□□□□ 0.84
SGCA-208ENST00000512526 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
SGCA-208ENST00000512526 ANKRD13DQ6ZTN6 518 aa20.27■□□□□ 0.84
SGCA-208ENST00000512526 G2E3Q7L622 706 aa20.26■□□□□ 0.83
SGCA-208ENST00000512526 PLBD2Q8NHP8 589 aa20.26■□□□□ 0.83
SGCA-208ENST00000512526 SETDB2Q96T68 719 aa20.26■□□□□ 0.83
SGCA-208ENST00000512526 SERPINB2P05120 415 aa20.25■□□□□ 0.83
SGCA-208ENST00000512526 ZNF34Q8IZ26 560 aa20.25■□□□□ 0.83
SGCA-208ENST00000512526 ZNF428Q96B54 188 aa20.25■□□□□ 0.83
SGCA-208ENST00000512526 FHDC1Q9C0D6 1143 aaPredicted RBP20.25■□□□□ 0.83
SGCA-208ENST00000512526 CT47B1P0C2W7 299 aaPredicted RBP20.24■□□□□ 0.83
SGCA-208ENST00000512526 NIP7Q9Y221 180 aaKnown RBP eCLIP20.24■□□□□ 0.83
SGCA-208ENST00000512526 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
SGCA-208ENST00000512526 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
SGCA-208ENST00000512526 SYT17Q9BSW7 474 aa20.23■□□□□ 0.83
SGCA-208ENST00000512526 ATP10DQ9P241 1426 aa20.21■□□□□ 0.83
SGCA-208ENST00000512526 FLIIQ13045 1269 aa20.21■□□□□ 0.83
SGCA-208ENST00000512526 MRPL50Q8N5N7 158 aaKnown RBP20.21■□□□□ 0.83
SGCA-208ENST00000512526 SSH1Q8WYL5 1049 aa20.21■□□□□ 0.83
SGCA-208ENST00000512526 CARMIL3Q8ND23 1372 aa20.21■□□□□ 0.83
SGCA-208ENST00000512526 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
SGCA-208ENST00000512526 HSP90AB3PQ58FF7 597 aa20.2■□□□□ 0.82
SGCA-208ENST00000512526 KSR2Q6VAB6 950 aa20.2■□□□□ 0.82
SGCA-208ENST00000512526 RIC3Q7Z5B4 369 aa20.2■□□□□ 0.82
SGCA-208ENST00000512526 UBN2Q6ZU65 1347 aa20.2■□□□□ 0.82
SGCA-208ENST00000512526 PI4KAP2A4QPH2 592 aa20.19■□□□□ 0.82
SGCA-208ENST00000512526 GPTP24298 496 aa20.19■□□□□ 0.82
SGCA-208ENST00000512526 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
SGCA-208ENST00000512526 ALDH1L2Q3SY69 923 aa20.19■□□□□ 0.82
SGCA-208ENST00000512526 PI4KAP1Q8N8J0 262 aa20.19■□□□□ 0.82
SGCA-208ENST00000512526 ISCA1Q9BUE6 129 aa20.19■□□□□ 0.82
SGCA-208ENST00000512526 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
SGCA-208ENST00000512526 PARP10Q53GL7 1025 aa20.18■□□□□ 0.82
SGCA-208ENST00000512526 SUSD4Q5VX71 490 aa20.18■□□□□ 0.82
SGCA-208ENST00000512526 PRR5LQ6MZQ0 368 aa20.18■□□□□ 0.82
SGCA-208ENST00000512526 TPTE2Q6XPS3 522 aa20.18■□□□□ 0.82
SGCA-208ENST00000512526 NLRP10Q86W26 655 aa20.17■□□□□ 0.82
SGCA-208ENST00000512526 NBPF5PQ86XG9 351 aaPredicted RBP20.17■□□□□ 0.82
SGCA-208ENST00000512526 NLGN2Q8NFZ4 835 aa20.17■□□□□ 0.82
SGCA-208ENST00000512526 METTL22Q9BUU2 404 aaPredicted RBP20.17■□□□□ 0.82
SGCA-208ENST00000512526 MAP3K2Q9Y2U5 619 aa20.17■□□□□ 0.82
SGCA-208ENST00000512526 ADCY9O60503 1353 aa20.17■□□□□ 0.82
SGCA-208ENST00000512526 C10orf71Q711Q0 1435 aa20.17■□□□□ 0.82
SGCA-208ENST00000512526 RARSP54136 660 aaKnown RBP20.16■□□□□ 0.82
SGCA-208ENST00000512526 BRPF1P55201 1214 aaPredicted RBP20.16■□□□□ 0.82
SGCA-208ENST00000512526 TGFB2P61812 414 aa20.16■□□□□ 0.82
SGCA-208ENST00000512526 KLHL34Q8N239 644 aa20.16■□□□□ 0.82
SGCA-208ENST00000512526 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
SGCA-208ENST00000512526 ATP5J2-PTCD1G3V325 749 aa20.15■□□□□ 0.82
SGCA-208ENST00000512526 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
SGCA-208ENST00000512526 CCDC24Q8N4L8 307 aa20.15■□□□□ 0.82
SGCA-208ENST00000512526 CNBD1Q8NA66 436 aa20.15■□□□□ 0.82
SGCA-208ENST00000512526 BRIP1Q9BX63 1249 aa20.15■□□□□ 0.82
SGCA-208ENST00000512526 NYXQ9GZU5 481 aa20.15■□□□□ 0.82
SGCA-208ENST00000512526 FAM177BA6PVY3 158 aa20.14■□□□□ 0.81
SGCA-208ENST00000512526 NTSR2O95665 410 aa20.14■□□□□ 0.81
SGCA-208ENST00000512526 PPP1R42Q7Z4L9 355 aa20.14■□□□□ 0.81
SGCA-208ENST00000512526 MYD88Q99836 296 aa20.14■□□□□ 0.81
SGCA-208ENST00000512526 UTP14AQ9BVJ6 771 aaKnown RBP20.14■□□□□ 0.81
SGCA-208ENST00000512526 BCL2L13Q9BXK5 485 aa20.14■□□□□ 0.81
SGCA-208ENST00000512526 SMC4Q9NTJ3 1288 aa20.13■□□□□ 0.81
SGCA-208ENST00000512526 IBTKQ9P2D0 1353 aaPredicted RBP20.12■□□□□ 0.81
SGCA-208ENST00000512526 A0A0G2JLW4 131 aa20.12■□□□□ 0.81
SGCA-208ENST00000512526 IGKV5-2P06315 115 aa20.12■□□□□ 0.81
SGCA-208ENST00000512526 KCNA3P22001 575 aa20.12■□□□□ 0.81
SGCA-208ENST00000512526 NUTM1Q86Y26 1132 aa20.12■□□□□ 0.81
SGCA-208ENST00000512526 DNAAF4Q8WXU2 420 aa20.12■□□□□ 0.81
SGCA-208ENST00000512526 KLRG2A4D1S0 409 aaPredicted RBP20.11■□□□□ 0.81
SGCA-208ENST00000512526 F6X3S4 739 aa20.11■□□□□ 0.81
SGCA-208ENST00000512526 DPEP1P16444 411 aa20.11■□□□□ 0.81
SGCA-208ENST00000512526 ST5P78524 1137 aa20.11■□□□□ 0.81
SGCA-208ENST00000512526 ERFEQ4G0M1 354 aa20.11■□□□□ 0.81
SGCA-208ENST00000512526 SLC10A5Q5PT55 438 aa20.11■□□□□ 0.81
SGCA-208ENST00000512526 CCDC191Q8NCU4 936 aa20.11■□□□□ 0.81
SGCA-208ENST00000512526 NRXN2Q9P2S2 1712 aa20.1■□□□□ 0.81
SGCA-208ENST00000512526 PTPRCP08575 1304 aa20.1■□□□□ 0.81
SGCA-208ENST00000512526 NPHP1O15259 732 aa20.1■□□□□ 0.81
SGCA-208ENST00000512526 GTF2E1P29083 439 aaPredicted RBP20.1■□□□□ 0.81
SGCA-208ENST00000512526 SYNE4Q8N205 404 aa20.1■□□□□ 0.81
SGCA-208ENST00000512526 TRMT112Q9UI30 125 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms