RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 PTCH1Q13635 1447 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 SYT1P21579 422 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 LIMCH1Q9UPQ0 1083 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 SF3A1Q15459 793 aaKnown RBP12.7□□□□□ -0.38
PDCD6-209ENST00000512466 TNMDQ9H2S6 317 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 KIF3AQ9Y496 699 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 TPD52L1Q16890 204 aaPredicted RBP12.7□□□□□ -0.38
PDCD6-209ENST00000512466 RIC3Q7Z5B4 369 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 EYA1Q99502 592 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 TULP4Q9NRJ4 1543 aa12.7□□□□□ -0.38
PDCD6-209ENST00000512466 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
PDCD6-209ENST00000512466 TRERF1Q96PN7 1200 aa12.69□□□□□ -0.38
PDCD6-209ENST00000512466 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
PDCD6-209ENST00000512466 NDUFB9Q9Y6M9 179 aa12.69□□□□□ -0.38
PDCD6-209ENST00000512466 TTC21AQ8NDW8 1320 aa12.69□□□□□ -0.38
PDCD6-209ENST00000512466 NBPF7P0C2Y1 421 aaPredicted RBP12.69□□□□□ -0.38
PDCD6-209ENST00000512466 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
PDCD6-209ENST00000512466 C1orf141Q5JVX7 400 aa12.69□□□□□ -0.38
PDCD6-209ENST00000512466 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
PDCD6-209ENST00000512466 DIP2AQ14689 1571 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 ZSCAN22P10073 491 aaPredicted RBP12.68□□□□□ -0.38
PDCD6-209ENST00000512466 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDCD6-209ENST00000512466 V9GYY5 206 aaPredicted RBP12.68□□□□□ -0.38
PDCD6-209ENST00000512466 MED14O60244 1454 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 PIP4K2BP78356 416 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 KIF1BPQ96EK5 621 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 SPATA32Q96LK8 384 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 TRMT1Q9NXH9 659 aaKnown RBP12.68□□□□□ -0.38
PDCD6-209ENST00000512466 MAP3K19Q56UN5 1328 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 KRT85P78386 507 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
PDCD6-209ENST00000512466 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 SLAIN2Q9P270 581 aa12.68□□□□□ -0.38
PDCD6-209ENST00000512466 BRD1O95696 1058 aa12.67□□□□□ -0.38
PDCD6-209ENST00000512466 DDIT3P35638 169 aa12.67□□□□□ -0.38
PDCD6-209ENST00000512466 GORABQ5T7V8 394 aa12.67□□□□□ -0.38
PDCD6-209ENST00000512466 LUZP1Q86V48 1076 aa12.67□□□□□ -0.38
PDCD6-209ENST00000512466 RASEFQ8IZ41 740 aa12.67□□□□□ -0.38
PDCD6-209ENST00000512466 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
PDCD6-209ENST00000512466 EDC4Q6P2E9 1401 aaKnown RBP12.67□□□□□ -0.38
PDCD6-209ENST00000512466 CWF19L2Q2TBE0 894 aaKnown RBP12.67□□□□□ -0.38
PDCD6-209ENST00000512466 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
PDCD6-209ENST00000512466 ZNF853P0CG23 659 aa12.67□□□□□ -0.38
PDCD6-209ENST00000512466 BLOC1S2Q6QNY1 142 aa12.67□□□□□ -0.38
PDCD6-209ENST00000512466 MTERF4Q7Z6M4 381 aaKnown RBP12.67□□□□□ -0.38
PDCD6-209ENST00000512466 BTBD11A6QL63 1104 aa12.66□□□□□ -0.38
PDCD6-209ENST00000512466 RAB11FIP4Q86YS3 637 aa12.66□□□□□ -0.38
PDCD6-209ENST00000512466 CCDC85AQ96PX6 553 aaPredicted RBP12.66□□□□□ -0.38
PDCD6-209ENST00000512466 ADGRL3Q9HAR2 1447 aa12.66□□□□□ -0.38
PDCD6-209ENST00000512466 ARHGEF28Q8N1W1 1705 aaKnown RBP12.66□□□□□ -0.38
PDCD6-209ENST00000512466 TNNT3P45378 269 aaPredicted RBP12.66□□□□□ -0.38
PDCD6-209ENST00000512466 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
PDCD6-209ENST00000512466 PDCL2Q8N4E4 241 aa12.66□□□□□ -0.38
PDCD6-209ENST00000512466 CCDC186Q7Z3E2 898 aa12.66□□□□□ -0.38
PDCD6-209ENST00000512466 LMTK3Q96Q04 1460 aa12.65□□□□□ -0.38
PDCD6-209ENST00000512466 PTGS1P23219 599 aa12.65□□□□□ -0.38
PDCD6-209ENST00000512466 SDF4Q9BRK5 362 aa12.65□□□□□ -0.38
PDCD6-209ENST00000512466 F13A1P00488 732 aa12.65□□□□□ -0.38
PDCD6-209ENST00000512466 UBE2HP62256 183 aa12.65□□□□□ -0.38
PDCD6-209ENST00000512466 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
PDCD6-209ENST00000512466 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
PDCD6-209ENST00000512466 DACT1Q9NYF0 836 aa12.65□□□□□ -0.38
PDCD6-209ENST00000512466 SNX14Q9Y5W7 946 aa12.65□□□□□ -0.38
PDCD6-209ENST00000512466 HMGN5P82970 282 aaKnown RBP12.65□□□□□ -0.39
PDCD6-209ENST00000512466 RNF20Q5VTR2 975 aa12.65□□□□□ -0.39
PDCD6-209ENST00000512466 CREBRFQ8IUR6 639 aa12.65□□□□□ -0.39
PDCD6-209ENST00000512466 KCNH5Q8NCM2 988 aa12.65□□□□□ -0.39
PDCD6-209ENST00000512466 ERCC4Q92889 916 aaPredicted RBP12.65□□□□□ -0.39
PDCD6-209ENST00000512466 EDC3Q96F86 508 aaKnown RBP12.65□□□□□ -0.39
PDCD6-209ENST00000512466 IL25Q9H293 177 aa12.65□□□□□ -0.39
PDCD6-209ENST00000512466 ATP7BP35670 1465 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 DYNC1I1O14576 645 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 KCNQ3O43525 872 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 CCT2P78371 535 aaKnown RBP12.64□□□□□ -0.39
PDCD6-209ENST00000512466 ISM2Q6H9L7 571 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 CCAR2Q8N163 923 aaKnown RBP12.64□□□□□ -0.39
PDCD6-209ENST00000512466 DDX17Q92841 729 aaKnown RBP12.64□□□□□ -0.39
PDCD6-209ENST00000512466 A0A087WWV3 80 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 HSP90AB4PQ58FF6 505 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 ERICH4A6NGS2 130 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
PDCD6-209ENST00000512466 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
PDCD6-209ENST00000512466 FAM177A1Q8N128 213 aaPredicted RBP12.64□□□□□ -0.39
PDCD6-209ENST00000512466 LRRC59Q96AG4 307 aaKnown RBP12.64□□□□□ -0.39
PDCD6-209ENST00000512466 SYTL4Q96C24 671 aaPredicted RBP12.64□□□□□ -0.39
PDCD6-209ENST00000512466 FAM227BQ96M60 508 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
PDCD6-209ENST00000512466 LGR6Q9HBX8 967 aa12.63□□□□□ -0.39
PDCD6-209ENST00000512466 TOM1O60784 492 aa12.63□□□□□ -0.39
PDCD6-209ENST00000512466 LARGE1O95461 756 aa12.63□□□□□ -0.39
PDCD6-209ENST00000512466 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
PDCD6-209ENST00000512466 ADCK5Q3MIX3 580 aa12.63□□□□□ -0.39
PDCD6-209ENST00000512466 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
PDCD6-209ENST00000512466 ANKARQ7Z5J8 1434 aa12.63□□□□□ -0.39
PDCD6-209ENST00000512466 CPS1P31327 1500 aa12.63□□□□□ -0.39
PDCD6-209ENST00000512466 PTH1RQ03431 593 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms