RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 DDX21Q9NR30 783 aaKnown RBP eCLIP19.83■□□□□ 0.77
SQSTM1-214ENST00000512234 VAMP4O75379 141 aa19.82■□□□□ 0.76
SQSTM1-214ENST00000512234 FHDC1Q9C0D6 1143 aaPredicted RBP19.82■□□□□ 0.76
SQSTM1-214ENST00000512234 HOXB7P09629 217 aa19.82■□□□□ 0.76
SQSTM1-214ENST00000512234 GOLGB1Q14789 3259 aaKnown RBP19.81■□□□□ 0.76
SQSTM1-214ENST00000512234 LRP5O75197 1615 aa19.81■□□□□ 0.76
SQSTM1-214ENST00000512234 FAM177BA6PVY3 158 aa19.81■□□□□ 0.76
SQSTM1-214ENST00000512234 E9PSI1 815 aa19.81■□□□□ 0.76
SQSTM1-214ENST00000512234 TM4SF1P30408 202 aa19.81■□□□□ 0.76
SQSTM1-214ENST00000512234 G2E3Q7L622 706 aa19.81■□□□□ 0.76
SQSTM1-214ENST00000512234 DBF4Q9UBU7 674 aaPredicted RBP19.8■□□□□ 0.76
SQSTM1-214ENST00000512234 WWC3Q9ULE0 1092 aa19.8■□□□□ 0.76
SQSTM1-214ENST00000512234 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-214ENST00000512234 ERBB4Q15303 1308 aa19.79■□□□□ 0.76
SQSTM1-214ENST00000512234 POLRMTO00411 1230 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-214ENST00000512234 GPTP24298 496 aa19.79■□□□□ 0.76
SQSTM1-214ENST00000512234 NLGN2Q8NFZ4 835 aa19.79■□□□□ 0.76
SQSTM1-214ENST00000512234 MAP3K15Q6ZN16 1313 aa19.78■□□□□ 0.76
SQSTM1-214ENST00000512234 CCDC30Q5VVM6 783 aa19.78■□□□□ 0.76
SQSTM1-214ENST00000512234 KIF6Q6ZMV9 814 aa19.78■□□□□ 0.76
SQSTM1-214ENST00000512234 TRMT2AQ8IZ69 625 aaKnown RBP19.78■□□□□ 0.76
SQSTM1-214ENST00000512234 PARP3Q9Y6F1 533 aa19.78■□□□□ 0.76
SQSTM1-214ENST00000512234 COL24A1Q17RW2 1714 aa19.78■□□□□ 0.76
SQSTM1-214ENST00000512234 SLC4A2P04920 1241 aa19.77■□□□□ 0.76
SQSTM1-214ENST00000512234 SCN7AQ01118 1682 aa19.76■□□□□ 0.75
SQSTM1-214ENST00000512234 SYT17Q9BSW7 474 aa19.76■□□□□ 0.75
SQSTM1-214ENST00000512234 SERPINB2P05120 415 aa19.76■□□□□ 0.75
SQSTM1-214ENST00000512234 BCL2L13Q9BXK5 485 aa19.76■□□□□ 0.75
SQSTM1-214ENST00000512234 NIP7Q9Y221 180 aaKnown RBP eCLIP19.76■□□□□ 0.75
SQSTM1-214ENST00000512234 HYPKQ9NX55 129 aa19.75■□□□□ 0.75
SQSTM1-214ENST00000512234 BCORQ6W2J9 1755 aa19.75■□□□□ 0.75
SQSTM1-214ENST00000512234 SETDB2Q96T68 719 aa19.73■□□□□ 0.75
SQSTM1-214ENST00000512234 STK31Q9BXU1 1019 aa19.73■□□□□ 0.75
SQSTM1-214ENST00000512234 CARMIL3Q8ND23 1372 aa19.73■□□□□ 0.75
SQSTM1-214ENST00000512234 UBN2Q6ZU65 1347 aa19.73■□□□□ 0.75
SQSTM1-214ENST00000512234 UTRNP46939 3433 aa19.73■□□□□ 0.75
SQSTM1-214ENST00000512234 ATP5J2-PTCD1G3V325 749 aa19.73■□□□□ 0.75
SQSTM1-214ENST00000512234 ANKRD13DQ6ZTN6 518 aa19.73■□□□□ 0.75
SQSTM1-214ENST00000512234 ERVV-1B6SEH8 477 aa19.72■□□□□ 0.75
SQSTM1-214ENST00000512234 GIGYF2Q6Y7W6 1299 aaKnown RBP19.72■□□□□ 0.75
SQSTM1-214ENST00000512234 ZBED9Q6R2W3 1325 aa19.72■□□□□ 0.75
SQSTM1-214ENST00000512234 CLEC4GQ6UXB4 293 aa19.71■□□□□ 0.75
SQSTM1-214ENST00000512234 ZNF652Q9Y2D9 606 aa19.71■□□□□ 0.75
SQSTM1-214ENST00000512234 SUSD4Q5VX71 490 aa19.71■□□□□ 0.75
SQSTM1-214ENST00000512234 NUTM1Q86Y26 1132 aa19.71■□□□□ 0.75
SQSTM1-214ENST00000512234 PLBD2Q8NHP8 589 aa19.71■□□□□ 0.75
SQSTM1-214ENST00000512234 NUP98P52948 1817 aa19.7■□□□□ 0.74
SQSTM1-214ENST00000512234 A0A0G2JLW4 131 aa19.7■□□□□ 0.74
SQSTM1-214ENST00000512234 PRR5LQ6MZQ0 368 aa19.7■□□□□ 0.74
SQSTM1-214ENST00000512234 RIC3Q7Z5B4 369 aa19.7■□□□□ 0.74
SQSTM1-214ENST00000512234 SYNE4Q8N205 404 aa19.7■□□□□ 0.74
SQSTM1-214ENST00000512234 SSH1Q8WYL5 1049 aa19.7■□□□□ 0.74
SQSTM1-214ENST00000512234 PI4KAP2A4QPH2 592 aa19.69■□□□□ 0.74
SQSTM1-214ENST00000512234 CHRNA5P30532 468 aa19.69■□□□□ 0.74
SQSTM1-214ENST00000512234 NBPF5PQ86XG9 351 aaPredicted RBP19.69■□□□□ 0.74
SQSTM1-214ENST00000512234 ZNF34Q8IZ26 560 aa19.69■□□□□ 0.74
SQSTM1-214ENST00000512234 PI4KAP1Q8N8J0 262 aa19.69■□□□□ 0.74
SQSTM1-214ENST00000512234 AFDNP55196 1824 aaKnown RBP19.69■□□□□ 0.74
SQSTM1-214ENST00000512234 FLIIQ13045 1269 aa19.68■□□□□ 0.74
SQSTM1-214ENST00000512234 JARID2Q92833 1246 aaPredicted RBP19.68■□□□□ 0.74
SQSTM1-214ENST00000512234 MAP3K2Q9Y2U5 619 aa19.68■□□□□ 0.74
SQSTM1-214ENST00000512234 F6X3S4 739 aa19.68■□□□□ 0.74
SQSTM1-214ENST00000512234 NPHP1O15259 732 aa19.68■□□□□ 0.74
SQSTM1-214ENST00000512234 RTL5Q5HYW3 569 aaPredicted RBP19.68■□□□□ 0.74
SQSTM1-214ENST00000512234 MYD88Q99836 296 aa19.68■□□□□ 0.74
SQSTM1-214ENST00000512234 ADCY9O60503 1353 aa19.67■□□□□ 0.74
SQSTM1-214ENST00000512234 TCIRG1Q13488 830 aa19.67■□□□□ 0.74
SQSTM1-214ENST00000512234 PELP1Q8IZL8 1130 aaKnown RBP19.67■□□□□ 0.74
SQSTM1-214ENST00000512234 MRPL50Q8N5N7 158 aaKnown RBP19.67■□□□□ 0.74
SQSTM1-214ENST00000512234 C10orf71Q711Q0 1435 aa19.67■□□□□ 0.74
SQSTM1-214ENST00000512234 DPEP1P16444 411 aa19.66■□□□□ 0.74
SQSTM1-214ENST00000512234 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
SQSTM1-214ENST00000512234 ERFEQ4G0M1 354 aa19.66■□□□□ 0.74
SQSTM1-214ENST00000512234 CNBD1Q8NA66 436 aa19.66■□□□□ 0.74
SQSTM1-214ENST00000512234 CD2APQ9Y5K6 639 aa19.66■□□□□ 0.74
SQSTM1-214ENST00000512234 NLRP10Q86W26 655 aa19.65■□□□□ 0.74
SQSTM1-214ENST00000512234 ATP10DQ9P241 1426 aa19.65■□□□□ 0.74
SQSTM1-214ENST00000512234 KSR2Q6VAB6 950 aa19.64■□□□□ 0.73
SQSTM1-214ENST00000512234 ABCC12Q96J65 1359 aa19.64■□□□□ 0.73
SQSTM1-214ENST00000512234 N4BP2Q86UW6 1770 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 NTSR2O95665 410 aa19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 KCNA3P22001 575 aa19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 GTF2E1P29083 439 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 CWF19L2Q2TBE0 894 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 C3orf67Q6ZVT6 689 aa19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 ISCA1Q9BUE6 129 aa19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 SMC4Q9NTJ3 1288 aa19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 ARFGEF2Q9Y6D5 1785 aa19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 PXDNLA1KZ92 1463 aa19.63■□□□□ 0.73
SQSTM1-214ENST00000512234 BCAR3O75815 825 aa19.62■□□□□ 0.73
SQSTM1-214ENST00000512234 IGKV5-2P06315 115 aa19.62■□□□□ 0.73
SQSTM1-214ENST00000512234 TPTE2Q6XPS3 522 aa19.62■□□□□ 0.73
SQSTM1-214ENST00000512234 METTL22Q9BUU2 404 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-214ENST00000512234 CHMP4AQ9BY43 222 aa19.62■□□□□ 0.73
SQSTM1-214ENST00000512234 NRXN2Q9P2S2 1712 aa19.62■□□□□ 0.73
SQSTM1-214ENST00000512234 DDX58O95786 925 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-214ENST00000512234 RARSP54136 660 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-214ENST00000512234 FAM89AQ96GI7 184 aa19.62■□□□□ 0.73
SQSTM1-214ENST00000512234 HCLS1P14317 486 aaPredicted RBP19.61■□□□□ 0.73
SQSTM1-214ENST00000512234 TRMT112Q9UI30 125 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms