RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 SLC4A10Q6U841 1118 aa12.62□□□□□ -0.39
PDGFRA-209ENST00000512143 METTL22Q9BUU2 404 aaPredicted RBP12.62□□□□□ -0.39
PDGFRA-209ENST00000512143 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
PDGFRA-209ENST00000512143 CCNL1Q9UK58 526 aaPredicted RBP12.62□□□□□ -0.39
PDGFRA-209ENST00000512143 PCDHB15Q9Y5E8 787 aa12.62□□□□□ -0.39
PDGFRA-209ENST00000512143 NUP188Q5SRE5 1749 aa12.62□□□□□ -0.39
PDGFRA-209ENST00000512143 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 KCNQ4P56696 695 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 B4GALNT3Q6L9W6 998 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 RIC3Q7Z5B4 369 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 PROM2Q8N271 834 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 LINS1Q8NG48 757 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 SRCIN1Q9C0H9 1055 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 USP44Q9H0E7 712 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
PDGFRA-209ENST00000512143 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
PDGFRA-209ENST00000512143 MEIS3Q99687 375 aa12.6□□□□□ -0.39
PDGFRA-209ENST00000512143 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
PDGFRA-209ENST00000512143 CCDC136Q96JN2 1154 aa12.59□□□□□ -0.39
PDGFRA-209ENST00000512143 UTYO14607 1347 aa12.59□□□□□ -0.39
PDGFRA-209ENST00000512143 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
PDGFRA-209ENST00000512143 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
PDGFRA-209ENST00000512143 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 ERVV-1B6SEH8 477 aa12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 RPS6KA4O75676 772 aa12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 TRIM28Q13263 835 aaKnown RBP12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 TXNRD1Q16881 649 aa12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 CWF19L2Q2TBE0 894 aaKnown RBP12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 MYD88Q99836 296 aa12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 ISCA1Q9BUE6 129 aa12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.4
PDGFRA-209ENST00000512143 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 RGL2O15211 777 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 APBA3O96018 575 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 IGHDP01880 384 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 GNAI3P08754 354 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 TCIRG1Q13488 830 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 HDAC1Q13547 482 aaPredicted RBP12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 GCKRQ14397 625 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 GIGYF2Q6Y7W6 1299 aaKnown RBP12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 KIF6Q6ZMV9 814 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 SIRT2Q8IXJ6 389 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 ZBTB3Q9H5J0 574 aa12.57□□□□□ -0.4
PDGFRA-209ENST00000512143 COL15A1P39059 1388 aa12.56□□□□□ -0.4
PDGFRA-209ENST00000512143 CAMTA2O94983 1202 aa12.56□□□□□ -0.4
PDGFRA-209ENST00000512143 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
PDGFRA-209ENST00000512143 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
PDGFRA-209ENST00000512143 NEXNQ0ZGT2 675 aa12.56□□□□□ -0.4
PDGFRA-209ENST00000512143 HLFQ16534 295 aa12.56□□□□□ -0.4
PDGFRA-209ENST00000512143 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
PDGFRA-209ENST00000512143 DZIP3Q86Y13 1208 aaKnown RBP12.56□□□□□ -0.4
PDGFRA-209ENST00000512143 TBC1D2BQ9UPU7 963 aa12.56□□□□□ -0.4
PDGFRA-209ENST00000512143 NUP98P52948 1817 aa12.55□□□□□ -0.4
PDGFRA-209ENST00000512143 A0A087WZG4 1122 aa12.55□□□□□ -0.4
PDGFRA-209ENST00000512143 GRM8O00222 908 aa12.55□□□□□ -0.4
PDGFRA-209ENST00000512143 GNAI2P04899 355 aa12.55□□□□□ -0.4
PDGFRA-209ENST00000512143 CASP7P55210 303 aa12.55□□□□□ -0.4
PDGFRA-209ENST00000512143 RPAP2Q8IXW5 612 aaPredicted RBP12.55□□□□□ -0.4
PDGFRA-209ENST00000512143 C1orf115Q9H7X2 142 aa12.55□□□□□ -0.4
PDGFRA-209ENST00000512143 ZNF330Q9Y3S2 320 aaPredicted RBP12.55□□□□□ -0.4
PDGFRA-209ENST00000512143 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
PDGFRA-209ENST00000512143 H7C1W4 665 aa12.54□□□□□ -0.4
PDGFRA-209ENST00000512143 HSP90AB3PQ58FF7 597 aa12.54□□□□□ -0.4
PDGFRA-209ENST00000512143 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
PDGFRA-209ENST00000512143 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
PDGFRA-209ENST00000512143 ANKRD44Q8N8A2 993 aa12.54□□□□□ -0.4
PDGFRA-209ENST00000512143 CCDC191Q8NCU4 936 aa12.54□□□□□ -0.4
PDGFRA-209ENST00000512143 KAZALD1Q96I82 304 aa12.54□□□□□ -0.4
PDGFRA-209ENST00000512143 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 UBTFL1P0CB47 393 aaPredicted RBP12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 CENPQQ7L2Z9 268 aaPredicted RBP12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 RWDD1Q9H446 243 aaPredicted RBP12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 LRRFIP2Q9Y608 721 aaKnown RBP12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
PDGFRA-209ENST00000512143 GNPATO15228 680 aa12.52□□□□□ -0.41
PDGFRA-209ENST00000512143 ATP8B2P98198 1209 aa12.52□□□□□ -0.41
PDGFRA-209ENST00000512143 SMIM5Q71RC9 77 aa12.52□□□□□ -0.41
PDGFRA-209ENST00000512143 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.41
PDGFRA-209ENST00000512143 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
PDGFRA-209ENST00000512143 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
PDGFRA-209ENST00000512143 C9orf78Q9NZ63 289 aaPredicted RBP12.52□□□□□ -0.41
PDGFRA-209ENST00000512143 MTX1Q13505 466 aa12.51□□□□□ -0.41
PDGFRA-209ENST00000512143 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
PDGFRA-209ENST00000512143 SMC5Q8IY18 1101 aa12.51□□□□□ -0.41
PDGFRA-209ENST00000512143 AK7Q96M32 723 aa12.51□□□□□ -0.41
PDGFRA-209ENST00000512143 HDAC5Q9UQL6 1122 aa12.51□□□□□ -0.41
PDGFRA-209ENST00000512143 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
PDGFRA-209ENST00000512143 SSFA2P28290 1259 aa12.5□□□□□ -0.41
PDGFRA-209ENST00000512143 TRAPPC3LQ5T215 181 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms