RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
HOXA4-203ENST00000511914 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
HOXA4-203ENST00000511914 SOS1Q07889 1333 aaPredicted RBP13.37□□□□□ -0.27
HOXA4-203ENST00000511914 TJP1Q07157 1748 aa13.36□□□□□ -0.27
HOXA4-203ENST00000511914 MS4A1P11836 297 aa13.36□□□□□ -0.27
HOXA4-203ENST00000511914 ARHGAP27Q6ZUM4 889 aa13.36□□□□□ -0.27
HOXA4-203ENST00000511914 THUMPD2Q9BTF0 503 aaKnown RBP13.36□□□□□ -0.27
HOXA4-203ENST00000511914 MBIPQ9NS73 344 aa13.36□□□□□ -0.27
HOXA4-203ENST00000511914 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
HOXA4-203ENST00000511914 CEMIPQ8WUJ3 1361 aa13.35□□□□□ -0.27
HOXA4-203ENST00000511914 GYS1P13807 737 aa13.35□□□□□ -0.27
HOXA4-203ENST00000511914 DPEP1P16444 411 aa13.35□□□□□ -0.27
HOXA4-203ENST00000511914 RFC4P35249 363 aa13.35□□□□□ -0.27
HOXA4-203ENST00000511914 TGFB2P61812 414 aa13.35□□□□□ -0.27
HOXA4-203ENST00000511914 AAMPQ13685 434 aa13.35□□□□□ -0.27
HOXA4-203ENST00000511914 NLGN1Q8N2Q7 840 aa13.35□□□□□ -0.27
HOXA4-203ENST00000511914 WDR90Q96KV7 1748 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
HOXA4-203ENST00000511914 CABP4P57796 275 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 TAF7Q15545 349 aaPredicted RBP13.34□□□□□ -0.27
HOXA4-203ENST00000511914 C1orf141Q5JVX7 400 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 ZNF530Q6P9A1 599 aaPredicted RBP13.34□□□□□ -0.27
HOXA4-203ENST00000511914 MCM10Q7L590 875 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 DCAF5Q96JK2 942 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 NMRK2Q9NPI5 230 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 CCDC87Q9NVE4 849 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 LAS1LQ9Y4W2 734 aaKnown RBP13.34□□□□□ -0.27
HOXA4-203ENST00000511914 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
HOXA4-203ENST00000511914 ERVV-2B6SEH9 535 aa13.33□□□□□ -0.28
HOXA4-203ENST00000511914 VAMP4O75379 141 aa13.33□□□□□ -0.28
HOXA4-203ENST00000511914 BCAR3O75815 825 aa13.33□□□□□ -0.28
HOXA4-203ENST00000511914 IRX6P78412 446 aaPredicted RBP13.33□□□□□ -0.28
HOXA4-203ENST00000511914 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
HOXA4-203ENST00000511914 CHMP4AQ9BY43 222 aa13.33□□□□□ -0.28
HOXA4-203ENST00000511914 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.28
HOXA4-203ENST00000511914 SBF1O95248 1867 aa13.32□□□□□ -0.28
HOXA4-203ENST00000511914 IPO8O15397 1037 aaKnown RBP13.32□□□□□ -0.28
HOXA4-203ENST00000511914 RPS6KA4O75676 772 aa13.32□□□□□ -0.28
HOXA4-203ENST00000511914 HSP90AB1P08238 724 aaKnown RBP13.32□□□□□ -0.28
HOXA4-203ENST00000511914 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
HOXA4-203ENST00000511914 SRP68Q9UHB9 627 aaKnown RBP13.32□□□□□ -0.28
HOXA4-203ENST00000511914 KIF16BQ96L93 1317 aa13.32□□□□□ -0.28
HOXA4-203ENST00000511914 PLIN1O60240 522 aa13.31□□□□□ -0.28
HOXA4-203ENST00000511914 TOMM70O94826 608 aa13.31□□□□□ -0.28
HOXA4-203ENST00000511914 APLP1P51693 650 aa13.31□□□□□ -0.28
HOXA4-203ENST00000511914 ARHGAP45Q92619 1136 aa13.31□□□□□ -0.28
HOXA4-203ENST00000511914 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
HOXA4-203ENST00000511914 AFDNP55196 1824 aaKnown RBP13.3□□□□□ -0.28
HOXA4-203ENST00000511914 KCNA3P22001 575 aa13.3□□□□□ -0.28
HOXA4-203ENST00000511914 CRKLP46109 303 aaKnown RBP13.3□□□□□ -0.28
HOXA4-203ENST00000511914 TWISTNBQ3B726 338 aaPredicted RBP13.3□□□□□ -0.28
HOXA4-203ENST00000511914 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
HOXA4-203ENST00000511914 NFATC2IPQ8NCF5 419 aa13.3□□□□□ -0.28
HOXA4-203ENST00000511914 SSH1Q8WYL5 1049 aa13.3□□□□□ -0.28
HOXA4-203ENST00000511914 SMC4Q9NTJ3 1288 aa13.3□□□□□ -0.28
HOXA4-203ENST00000511914 TSPYL4Q9UJ04 414 aa13.3□□□□□ -0.28
HOXA4-203ENST00000511914 ADAMTS7Q9UKP4 1686 aa13.3□□□□□ -0.28
HOXA4-203ENST00000511914 CCDC88AQ3V6T2 1871 aa13.29□□□□□ -0.28
HOXA4-203ENST00000511914 KCPQ6ZWJ8 1503 aa13.29□□□□□ -0.28
HOXA4-203ENST00000511914 RNMTO43148 476 aaKnown RBP13.29□□□□□ -0.28
HOXA4-203ENST00000511914 ZKSCAN2Q63HK3 967 aa13.29□□□□□ -0.28
HOXA4-203ENST00000511914 C8orf58Q8NAV2 365 aa13.29□□□□□ -0.28
HOXA4-203ENST00000511914 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
HOXA4-203ENST00000511914 HOXB7P09629 217 aa13.28□□□□□ -0.28
HOXA4-203ENST00000511914 CANXP27824 592 aaKnown RBP13.28□□□□□ -0.28
HOXA4-203ENST00000511914 CHRNA5P30532 468 aa13.28□□□□□ -0.28
HOXA4-203ENST00000511914 HTRA3P83110 453 aa13.28□□□□□ -0.28
HOXA4-203ENST00000511914 DDR1Q08345 913 aa13.28□□□□□ -0.28
HOXA4-203ENST00000511914 TEFQ10587 303 aa13.28□□□□□ -0.28
HOXA4-203ENST00000511914 C16orf71Q8IYS4 520 aaPredicted RBP13.28□□□□□ -0.28
HOXA4-203ENST00000511914 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
HOXA4-203ENST00000511914 PIM2Q9P1W9 311 aa13.28□□□□□ -0.28
HOXA4-203ENST00000511914 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
HOXA4-203ENST00000511914 ATF7IPQ6VMQ6 1270 aa13.27□□□□□ -0.29
HOXA4-203ENST00000511914 TSPYL6Q8N831 410 aa13.27□□□□□ -0.29
HOXA4-203ENST00000511914 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
HOXA4-203ENST00000511914 DALRD3Q5D0E6 543 aaKnown RBP13.26□□□□□ -0.29
HOXA4-203ENST00000511914 C20orf194Q5TEA3 1177 aa13.26□□□□□ -0.29
HOXA4-203ENST00000511914 DNAJC5GQ8N7S2 189 aa13.26□□□□□ -0.29
HOXA4-203ENST00000511914 FRAT1Q92837 279 aaPredicted RBP13.26□□□□□ -0.29
HOXA4-203ENST00000511914 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
HOXA4-203ENST00000511914 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
HOXA4-203ENST00000511914 LGR6Q9HBX8 967 aa13.26□□□□□ -0.29
HOXA4-203ENST00000511914 RNF181Q9P0P0 153 aa13.26□□□□□ -0.29
HOXA4-203ENST00000511914 DLEC1Q9Y238 1755 aa13.26□□□□□ -0.29
HOXA4-203ENST00000511914 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
HOXA4-203ENST00000511914 USPL1Q5W0Q7 1092 aa13.25□□□□□ -0.29
HOXA4-203ENST00000511914 DNAJC10Q8IXB1 793 aa13.25□□□□□ -0.29
HOXA4-203ENST00000511914 DZIP1LQ8IYY4 767 aaKnown RBP13.25□□□□□ -0.29
HOXA4-203ENST00000511914 MRPL50Q8N5N7 158 aaKnown RBP13.25□□□□□ -0.29
HOXA4-203ENST00000511914 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
HOXA4-203ENST00000511914 RRAGCQ9HB90 399 aa13.25□□□□□ -0.29
HOXA4-203ENST00000511914 POLRMTO00411 1230 aaKnown RBP13.24□□□□□ -0.29
HOXA4-203ENST00000511914 ZPR1O75312 459 aa13.24□□□□□ -0.29
HOXA4-203ENST00000511914 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
HOXA4-203ENST00000511914 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
HOXA4-203ENST00000511914 INTS5Q6P9B9 1019 aaKnown RBP13.24□□□□□ -0.29
HOXA4-203ENST00000511914 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms