RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MORC1Q86VD1 984 aa15.78■□□□□ 0.12
RNF4-216ENST00000511859 CCDC24Q8N4L8 307 aa15.78■□□□□ 0.12
RNF4-216ENST00000511859 CNBD1Q8NA66 436 aa15.78■□□□□ 0.12
RNF4-216ENST00000511859 COL11A2P13942 1736 aaPredicted RBP15.78■□□□□ 0.12
RNF4-216ENST00000511859 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
RNF4-216ENST00000511859 CCDC85CA6NKD9 419 aa15.77■□□□□ 0.12
RNF4-216ENST00000511859 IL6STP40189 918 aaPredicted RBP15.77■□□□□ 0.12
RNF4-216ENST00000511859 NPM2Q86SE8 214 aaKnown RBP15.77■□□□□ 0.12
RNF4-216ENST00000511859 TTC5Q8N0Z6 440 aa15.77■□□□□ 0.12
RNF4-216ENST00000511859 C7orf43Q8WVR3 580 aa15.77■□□□□ 0.12
RNF4-216ENST00000511859 POLR3GLQ9BT43 218 aa15.77■□□□□ 0.12
RNF4-216ENST00000511859 BEGAINQ9BUH8 593 aa15.77■□□□□ 0.12
RNF4-216ENST00000511859 TBC1D2BQ9UPU7 963 aa15.77■□□□□ 0.12
RNF4-216ENST00000511859 ARFGEF2Q9Y6D5 1785 aa15.77■□□□□ 0.11
RNF4-216ENST00000511859 CCDC93Q567U6 631 aa15.76■□□□□ 0.11
RNF4-216ENST00000511859 PANK3Q9H999 370 aa15.76■□□□□ 0.11
RNF4-216ENST00000511859 FKBP4Q02790 459 aaKnown RBP eCLIP15.75■□□□□ 0.11
RNF4-216ENST00000511859 ABT1Q9ULW3 272 aaKnown RBP15.75■□□□□ 0.11
RNF4-216ENST00000511859 PDE4DIPQ5VU43 2346 aa15.75■□□□□ 0.11
RNF4-216ENST00000511859 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
RNF4-216ENST00000511859 ADAMTSL1Q8N6G6 1762 aa15.75■□□□□ 0.11
RNF4-216ENST00000511859 ECE1P42892 770 aa15.75■□□□□ 0.11
RNF4-216ENST00000511859 MAP1SQ66K74 1059 aaPredicted RBP15.75■□□□□ 0.11
RNF4-216ENST00000511859 RTKN2Q8IZC4 609 aa15.75■□□□□ 0.11
RNF4-216ENST00000511859 NPR1P16066 1061 aa15.74■□□□□ 0.11
RNF4-216ENST00000511859 DDX21Q9NR30 783 aaKnown RBP eCLIP15.74■□□□□ 0.11
RNF4-216ENST00000511859 ZNF330Q9Y3S2 320 aaPredicted RBP15.74■□□□□ 0.11
RNF4-216ENST00000511859 ZNF541Q9H0D2 1346 aa15.73■□□□□ 0.11
RNF4-216ENST00000511859 FZD9O00144 591 aa15.73■□□□□ 0.11
RNF4-216ENST00000511859 MTHFSDQ2M296 383 aaKnown RBP15.73■□□□□ 0.11
RNF4-216ENST00000511859 GPC2Q8N158 579 aa15.73■□□□□ 0.11
RNF4-216ENST00000511859 ZNF277Q9NRM2 450 aaPredicted RBP15.73■□□□□ 0.11
RNF4-216ENST00000511859 SCN7AQ01118 1682 aa15.72■□□□□ 0.11
RNF4-216ENST00000511859 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
RNF4-216ENST00000511859 CAMTA2O94983 1202 aa15.72■□□□□ 0.11
RNF4-216ENST00000511859 ZNF790Q6PG37 636 aa15.72■□□□□ 0.11
RNF4-216ENST00000511859 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
RNF4-216ENST00000511859 ZNF496Q96IT1 587 aaPredicted RBP15.72■□□□□ 0.11
RNF4-216ENST00000511859 GPR101Q96P66 508 aaPredicted RBP15.72■□□□□ 0.11
RNF4-216ENST00000511859 RNF123Q5XPI4 1314 aa15.71■□□□□ 0.11
RNF4-216ENST00000511859 KLRG2A4D1S0 409 aaPredicted RBP15.71■□□□□ 0.11
RNF4-216ENST00000511859 CAPNS2Q96L46 248 aa15.71■□□□□ 0.11
RNF4-216ENST00000511859 HMOX1P09601 288 aa15.7■□□□□ 0.1
RNF4-216ENST00000511859 ALDH1B1P30837 517 aa15.7■□□□□ 0.1
RNF4-216ENST00000511859 MAP2K2P36507 400 aa15.7■□□□□ 0.1
RNF4-216ENST00000511859 IARSP41252 1262 aaKnown RBP15.7■□□□□ 0.1
RNF4-216ENST00000511859 NBPF5PQ86XG9 351 aaPredicted RBP15.7■□□□□ 0.1
RNF4-216ENST00000511859 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
RNF4-216ENST00000511859 A1BGP04217 495 aa15.69■□□□□ 0.1
RNF4-216ENST00000511859 TEFQ10587 303 aa15.69■□□□□ 0.1
RNF4-216ENST00000511859 TPTE2Q6XPS3 522 aa15.69■□□□□ 0.1
RNF4-216ENST00000511859 DZIP3Q86Y13 1208 aaKnown RBP15.69■□□□□ 0.1
RNF4-216ENST00000511859 JDP2Q8WYK2 163 aa15.69■□□□□ 0.1
RNF4-216ENST00000511859 TRPM7Q96QT4 1865 aa15.68■□□□□ 0.1
RNF4-216ENST00000511859 CA12O43570 354 aa15.68■□□□□ 0.1
RNF4-216ENST00000511859 PAXIP1Q6ZW49 1069 aaPredicted RBP15.68■□□□□ 0.1
RNF4-216ENST00000511859 SYNE4Q8N205 404 aa15.68■□□□□ 0.1
RNF4-216ENST00000511859 FMNL2Q96PY5 1086 aa15.68■□□□□ 0.1
RNF4-216ENST00000511859 KNSTRNQ9Y448 316 aa15.68■□□□□ 0.1
RNF4-216ENST00000511859 CASP8AP2Q9UKL3 1982 aa15.68■□□□□ 0.1
RNF4-216ENST00000511859 TNRC18O15417 2968 aaPredicted RBP15.67■□□□□ 0.1
RNF4-216ENST00000511859 LMOD1P29536 600 aaPredicted RBP15.67■□□□□ 0.1
RNF4-216ENST00000511859 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
RNF4-216ENST00000511859 CYP4F22Q6NT55 531 aa15.67■□□□□ 0.1
RNF4-216ENST00000511859 PSMD1Q99460 953 aa15.67■□□□□ 0.1
RNF4-216ENST00000511859 ZNF652Q9Y2D9 606 aa15.67■□□□□ 0.1
RNF4-216ENST00000511859 EIF6P56537 245 aaKnown RBP15.66■□□□□ 0.1
RNF4-216ENST00000511859 TLL2Q9Y6L7 1015 aa15.66■□□□□ 0.1
RNF4-216ENST00000511859 THSD7BQ9C0I4 1608 aa15.66■□□□□ 0.1
RNF4-216ENST00000511859 GNAT3A8MTJ3 354 aa15.65■□□□□ 0.1
RNF4-216ENST00000511859 RGL2O15211 777 aa15.65■□□□□ 0.1
RNF4-216ENST00000511859 GRM1Q13255 1194 aa15.65■□□□□ 0.1
RNF4-216ENST00000511859 CST9Q5W186 159 aa15.65■□□□□ 0.1
RNF4-216ENST00000511859 CC2D2BQ6DHV5 1058 aa15.65■□□□□ 0.1
RNF4-216ENST00000511859 USP50Q70EL3 339 aaPredicted RBP15.65■□□□□ 0.1
RNF4-216ENST00000511859 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
RNF4-216ENST00000511859 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
RNF4-216ENST00000511859 GRIPAP1Q4V328 841 aa15.64■□□□□ 0.09
RNF4-216ENST00000511859 OLFM4Q6UX06 510 aa15.64■□□□□ 0.09
RNF4-216ENST00000511859 MCOLN1Q9GZU1 580 aa15.64■□□□□ 0.09
RNF4-216ENST00000511859 GJA3Q9Y6H8 435 aa15.64■□□□□ 0.09
RNF4-216ENST00000511859 BCORQ6W2J9 1755 aa15.64■□□□□ 0.09
RNF4-216ENST00000511859 DIAPH1O60610 1272 aaKnown RBP15.63■□□□□ 0.09
RNF4-216ENST00000511859 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
RNF4-216ENST00000511859 EPS15P42566 896 aa15.62■□□□□ 0.09
RNF4-216ENST00000511859 HHIPL1Q96JK4 782 aa15.62■□□□□ 0.09
RNF4-216ENST00000511859 NIP7Q9Y221 180 aaKnown RBP eCLIP15.62■□□□□ 0.09
RNF4-216ENST00000511859 SCNN1DP51172 638 aa15.62■□□□□ 0.09
RNF4-216ENST00000511859 EIF4G2P78344 907 aaKnown RBP eCLIP15.62■□□□□ 0.09
RNF4-216ENST00000511859 FMR1Q06787 632 aaKnown RBP eCLIP15.62■□□□□ 0.09
RNF4-216ENST00000511859 SAPCD2Q86UD0 394 aa15.62■□□□□ 0.09
RNF4-216ENST00000511859 TSKSQ9UJT2 592 aa15.62■□□□□ 0.09
RNF4-216ENST00000511859 USP16Q9Y5T5 823 aa15.62■□□□□ 0.09
RNF4-216ENST00000511859 SIPA1L3O60292 1781 aaPredicted RBP15.61■□□□□ 0.09
RNF4-216ENST00000511859 BTBD11A6QL63 1104 aa15.61■□□□□ 0.09
RNF4-216ENST00000511859 AOC2O75106 756 aa15.61■□□□□ 0.09
RNF4-216ENST00000511859 GTF2E1P29083 439 aaPredicted RBP15.61■□□□□ 0.09
RNF4-216ENST00000511859 BRPF1P55201 1214 aaPredicted RBP15.61■□□□□ 0.09
RNF4-216ENST00000511859 TRAF5O00463 557 aa15.6■□□□□ 0.09
RNF4-216ENST00000511859 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms