RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 EIF4A2Q14240 407 aaKnown RBP12.98□□□□□ -0.33
PTPN20-225ENST00000511769 FKBP8Q14318 412 aa12.98□□□□□ -0.33
PTPN20-225ENST00000511769 CCDC146Q8IYE0 955 aa12.98□□□□□ -0.33
PTPN20-225ENST00000511769 RUNDC1Q96C34 613 aa12.98□□□□□ -0.33
PTPN20-225ENST00000511769 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
PTPN20-225ENST00000511769 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
PTPN20-225ENST00000511769 CYP27B1O15528 508 aa12.97□□□□□ -0.33
PTPN20-225ENST00000511769 MAP2K2P36507 400 aa12.97□□□□□ -0.33
PTPN20-225ENST00000511769 SRP68Q9UHB9 627 aaKnown RBP12.97□□□□□ -0.33
PTPN20-225ENST00000511769 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTPN20-225ENST00000511769 SCN4AP35499 1836 aa12.96□□□□□ -0.33
PTPN20-225ENST00000511769 ADAMTSL1Q8N6G6 1762 aa12.96□□□□□ -0.33
PTPN20-225ENST00000511769 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
PTPN20-225ENST00000511769 MAPK8IP3Q9UPT6 1336 aa12.95□□□□□ -0.34
PTPN20-225ENST00000511769 POLRMTO00411 1230 aaKnown RBP12.95□□□□□ -0.34
PTPN20-225ENST00000511769 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
PTPN20-225ENST00000511769 SLC17A8Q8NDX2 589 aa12.95□□□□□ -0.34
PTPN20-225ENST00000511769 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
PTPN20-225ENST00000511769 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
PTPN20-225ENST00000511769 TMOD3Q9NYL9 352 aa12.95□□□□□ -0.34
PTPN20-225ENST00000511769 SALL2Q9Y467 1007 aaPredicted RBP12.95□□□□□ -0.34
PTPN20-225ENST00000511769 DICER1Q9UPY3 1922 aaKnown RBP12.95□□□□□ -0.34
PTPN20-225ENST00000511769 DLEC1Q9Y238 1755 aa12.95□□□□□ -0.34
PTPN20-225ENST00000511769 RPS6KA4O75676 772 aa12.94□□□□□ -0.34
PTPN20-225ENST00000511769 HMOX1P09601 288 aa12.94□□□□□ -0.34
PTPN20-225ENST00000511769 NGEFQ8N5V2 710 aa12.94□□□□□ -0.34
PTPN20-225ENST00000511769 HACL1Q9UJ83 578 aa12.94□□□□□ -0.34
PTPN20-225ENST00000511769 APAF1O14727 1248 aa12.93□□□□□ -0.34
PTPN20-225ENST00000511769 EPHX2P34913 555 aa12.93□□□□□ -0.34
PTPN20-225ENST00000511769 FMR1Q06787 632 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTPN20-225ENST00000511769 SULT6B1Q6IMI4 303 aa12.93□□□□□ -0.34
PTPN20-225ENST00000511769 C2CD5Q86YS7 1000 aa12.93□□□□□ -0.34
PTPN20-225ENST00000511769 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
PTPN20-225ENST00000511769 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
PTPN20-225ENST00000511769 C21orf2O43822 256 aa12.92□□□□□ -0.34
PTPN20-225ENST00000511769 BRPF1P55201 1214 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-225ENST00000511769 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
PTPN20-225ENST00000511769 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
PTPN20-225ENST00000511769 ADAMTS7Q9UKP4 1686 aa12.92□□□□□ -0.34
PTPN20-225ENST00000511769 KDRP35968 1356 aa12.92□□□□□ -0.34
PTPN20-225ENST00000511769 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
PTPN20-225ENST00000511769 CIAPIN1Q6FI81 312 aa12.91□□□□□ -0.34
PTPN20-225ENST00000511769 PNMA8AQ86V59 439 aaPredicted RBP12.91□□□□□ -0.34
PTPN20-225ENST00000511769 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
PTPN20-225ENST00000511769 EYA1Q99502 592 aa12.91□□□□□ -0.34
PTPN20-225ENST00000511769 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
PTPN20-225ENST00000511769 ATG3Q9NT62 314 aa12.91□□□□□ -0.34
PTPN20-225ENST00000511769 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
PTPN20-225ENST00000511769 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
PTPN20-225ENST00000511769 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
PTPN20-225ENST00000511769 COL5A3P25940 1745 aaPredicted RBP12.89□□□□□ -0.35
PTPN20-225ENST00000511769 H0YIN7 160 aa12.89□□□□□ -0.35
PTPN20-225ENST00000511769 TM4SF1P30408 202 aa12.89□□□□□ -0.35
PTPN20-225ENST00000511769 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
PTPN20-225ENST00000511769 LTBP3Q9NS15 1303 aa12.89□□□□□ -0.35
PTPN20-225ENST00000511769 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
PTPN20-225ENST00000511769 FER1L6Q2WGJ9 1857 aa12.88□□□□□ -0.35
PTPN20-225ENST00000511769 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
PTPN20-225ENST00000511769 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
PTPN20-225ENST00000511769 TMPOP42166 694 aaKnown RBP12.88□□□□□ -0.35
PTPN20-225ENST00000511769 RIPK4P57078 832 aa12.88□□□□□ -0.35
PTPN20-225ENST00000511769 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-225ENST00000511769 CST9Q5W186 159 aa12.88□□□□□ -0.35
PTPN20-225ENST00000511769 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
PTPN20-225ENST00000511769 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTPN20-225ENST00000511769 RRP7AQ9Y3A4 280 aaKnown RBP12.88□□□□□ -0.35
PTPN20-225ENST00000511769 TRAF5O00463 557 aa12.87□□□□□ -0.35
PTPN20-225ENST00000511769 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
PTPN20-225ENST00000511769 NFE2L2Q16236 605 aa12.86□□□□□ -0.35
PTPN20-225ENST00000511769 CCDC27Q2M243 656 aa12.86□□□□□ -0.35
PTPN20-225ENST00000511769 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
PTPN20-225ENST00000511769 AFDNP55196 1824 aaKnown RBP12.85□□□□□ -0.35
PTPN20-225ENST00000511769 PITPNM2Q9BZ72 1349 aa12.85□□□□□ -0.35
PTPN20-225ENST00000511769 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
PTPN20-225ENST00000511769 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
PTPN20-225ENST00000511769 LMOD3Q0VAK6 560 aa12.85□□□□□ -0.35
PTPN20-225ENST00000511769 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
PTPN20-225ENST00000511769 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
PTPN20-225ENST00000511769 WWC1Q8IX03 1113 aa12.85□□□□□ -0.35
PTPN20-225ENST00000511769 ZNF831Q5JPB2 1677 aa12.84□□□□□ -0.35
PTPN20-225ENST00000511769 NFIXQ14938 502 aa12.84□□□□□ -0.35
PTPN20-225ENST00000511769 SAPCD2Q86UD0 394 aa12.84□□□□□ -0.35
PTPN20-225ENST00000511769 WDR63Q8IWG1 891 aa12.84□□□□□ -0.35
PTPN20-225ENST00000511769 GAS2L2Q8NHY3 880 aa12.84□□□□□ -0.35
PTPN20-225ENST00000511769 NRXN2Q9P2S2 1712 aa12.83□□□□□ -0.36
PTPN20-225ENST00000511769 MYH14Q7Z406 1995 aaKnown RBP12.83□□□□□ -0.36
PTPN20-225ENST00000511769 ZPR1O75312 459 aa12.83□□□□□ -0.36
PTPN20-225ENST00000511769 SERPINB2P05120 415 aa12.83□□□□□ -0.36
PTPN20-225ENST00000511769 CRKLP46109 303 aaKnown RBP12.83□□□□□ -0.36
PTPN20-225ENST00000511769 PLEKHO1Q53GL0 409 aaPredicted RBP12.83□□□□□ -0.36
PTPN20-225ENST00000511769 BICDL1Q6ZP65 573 aa12.83□□□□□ -0.36
PTPN20-225ENST00000511769 TRPM7Q96QT4 1865 aa12.82□□□□□ -0.36
PTPN20-225ENST00000511769 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
PTPN20-225ENST00000511769 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
PTPN20-225ENST00000511769 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
PTPN20-225ENST00000511769 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
PTPN20-225ENST00000511769 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
PTPN20-225ENST00000511769 ZIC5Q96T25 663 aa12.82□□□□□ -0.36
PTPN20-225ENST00000511769 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
PTPN20-225ENST00000511769 ZNF521Q96K83 1311 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms