RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 EXOC6Q8TAG9 804 aa11.56□□□□□ -0.56
NR1I3-228ENST00000511676 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
NR1I3-228ENST00000511676 NOB1Q9ULX3 412 aaKnown RBP11.56□□□□□ -0.56
NR1I3-228ENST00000511676 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
NR1I3-228ENST00000511676 UBR2Q8IWV8 1755 aa11.55□□□□□ -0.56
NR1I3-228ENST00000511676 TOMM70O94826 608 aa11.55□□□□□ -0.56
NR1I3-228ENST00000511676 YBX3P16989 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
NR1I3-228ENST00000511676 C20orf194Q5TEA3 1177 aa11.55□□□□□ -0.56
NR1I3-228ENST00000511676 BCL2L13Q9BXK5 485 aa11.55□□□□□ -0.56
NR1I3-228ENST00000511676 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
NR1I3-228ENST00000511676 DOT1LQ8TEK3 1739 aa11.55□□□□□ -0.56
NR1I3-228ENST00000511676 RPS6KA4O75676 772 aa11.54□□□□□ -0.56
NR1I3-228ENST00000511676 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
NR1I3-228ENST00000511676 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
NR1I3-228ENST00000511676 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
NR1I3-228ENST00000511676 FMNL2Q96PY5 1086 aa11.54□□□□□ -0.56
NR1I3-228ENST00000511676 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
NR1I3-228ENST00000511676 MIS18AQ9NYP9 233 aa11.54□□□□□ -0.56
NR1I3-228ENST00000511676 KDM2BQ8NHM5 1336 aa11.54□□□□□ -0.56
NR1I3-228ENST00000511676 ATP10DQ9P241 1426 aa11.53□□□□□ -0.56
NR1I3-228ENST00000511676 TOGARAM1Q9Y4F4 1720 aa11.53□□□□□ -0.56
NR1I3-228ENST00000511676 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-228ENST00000511676 ZPR1O75312 459 aa11.53□□□□□ -0.56
NR1I3-228ENST00000511676 MMP10P09238 476 aa11.53□□□□□ -0.56
NR1I3-228ENST00000511676 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
NR1I3-228ENST00000511676 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
NR1I3-228ENST00000511676 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
NR1I3-228ENST00000511676 PIM2Q9P1W9 311 aa11.53□□□□□ -0.56
NR1I3-228ENST00000511676 DBF4Q9UBU7 674 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-228ENST00000511676 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
NR1I3-228ENST00000511676 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-228ENST00000511676 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
NR1I3-228ENST00000511676 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
NR1I3-228ENST00000511676 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.57
NR1I3-228ENST00000511676 KRT24Q2M2I5 525 aa11.52□□□□□ -0.57
NR1I3-228ENST00000511676 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.57
NR1I3-228ENST00000511676 CNTNAP4Q9C0A0 1308 aa11.52□□□□□ -0.57
NR1I3-228ENST00000511676 C5P01031 1676 aa11.52□□□□□ -0.57
NR1I3-228ENST00000511676 RLBP1P12271 317 aa11.51□□□□□ -0.57
NR1I3-228ENST00000511676 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
NR1I3-228ENST00000511676 FSTL1Q12841 308 aa11.51□□□□□ -0.57
NR1I3-228ENST00000511676 POLA2Q14181 598 aa11.51□□□□□ -0.57
NR1I3-228ENST00000511676 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
NR1I3-228ENST00000511676 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-228ENST00000511676 PANK1Q8TE04 598 aa11.51□□□□□ -0.57
NR1I3-228ENST00000511676 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-228ENST00000511676 ATG3Q9NT62 314 aa11.51□□□□□ -0.57
NR1I3-228ENST00000511676 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
NR1I3-228ENST00000511676 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
NR1I3-228ENST00000511676 BCS1LQ9Y276 419 aa11.51□□□□□ -0.57
NR1I3-228ENST00000511676 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
NR1I3-228ENST00000511676 C4BP0C0L5 1744 aa11.5□□□□□ -0.57
NR1I3-228ENST00000511676 FLIIQ13045 1269 aa11.5□□□□□ -0.57
NR1I3-228ENST00000511676 DALRD3Q5D0E6 543 aaKnown RBP11.5□□□□□ -0.57
NR1I3-228ENST00000511676 LINC00116Q8NCU8 138 aa11.5□□□□□ -0.57
NR1I3-228ENST00000511676 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
NR1I3-228ENST00000511676 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
NR1I3-228ENST00000511676 A0A087WZG4 1122 aa11.49□□□□□ -0.57
NR1I3-228ENST00000511676 ABCB7O75027 752 aa11.49□□□□□ -0.57
NR1I3-228ENST00000511676 ITPRIPQ8IWB1 547 aa11.49□□□□□ -0.57
NR1I3-228ENST00000511676 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
NR1I3-228ENST00000511676 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-228ENST00000511676 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
NR1I3-228ENST00000511676 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
NR1I3-228ENST00000511676 KCNQ3O43525 872 aa11.48□□□□□ -0.57
NR1I3-228ENST00000511676 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
NR1I3-228ENST00000511676 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
NR1I3-228ENST00000511676 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
NR1I3-228ENST00000511676 ADCY9O60503 1353 aa11.47□□□□□ -0.57
NR1I3-228ENST00000511676 STARD3NLO95772 234 aa11.47□□□□□ -0.57
NR1I3-228ENST00000511676 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
NR1I3-228ENST00000511676 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-228ENST00000511676 ZNF526Q8TF50 670 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-228ENST00000511676 GOLGB1Q14789 3259 aaKnown RBP11.46□□□□□ -0.57
NR1I3-228ENST00000511676 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-228ENST00000511676 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
NR1I3-228ENST00000511676 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-228ENST00000511676 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
NR1I3-228ENST00000511676 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
NR1I3-228ENST00000511676 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.57
NR1I3-228ENST00000511676 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
NR1I3-228ENST00000511676 ITGB4P16144 1822 aa11.46□□□□□ -0.58
NR1I3-228ENST00000511676 TAF1LQ8IZX4 1826 aa11.46□□□□□ -0.58
NR1I3-228ENST00000511676 GYS1P13807 737 aa11.45□□□□□ -0.58
NR1I3-228ENST00000511676 ITPK1Q13572 414 aa11.45□□□□□ -0.58
NR1I3-228ENST00000511676 PDIA6Q15084 440 aa11.45□□□□□ -0.58
NR1I3-228ENST00000511676 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-228ENST00000511676 TNNQ9UQP3 1299 aa11.45□□□□□ -0.58
NR1I3-228ENST00000511676 A0A0G2JLW4 131 aa11.44□□□□□ -0.58
NR1I3-228ENST00000511676 PTCD1O75127 700 aaKnown RBP11.44□□□□□ -0.58
NR1I3-228ENST00000511676 GNAI3P08754 354 aa11.44□□□□□ -0.58
NR1I3-228ENST00000511676 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
NR1I3-228ENST00000511676 SOGA3Q5TF21 947 aa11.44□□□□□ -0.58
NR1I3-228ENST00000511676 H0YIN7 160 aa11.43□□□□□ -0.58
NR1I3-228ENST00000511676 TCERG1O14776 1098 aaKnown RBP11.43□□□□□ -0.58
NR1I3-228ENST00000511676 KIF3CO14782 793 aa11.43□□□□□ -0.58
NR1I3-228ENST00000511676 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
NR1I3-228ENST00000511676 DPEP1P16444 411 aa11.43□□□□□ -0.58
NR1I3-228ENST00000511676 CRKLP46109 303 aaKnown RBP11.43□□□□□ -0.58
NR1I3-228ENST00000511676 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms