RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 TMEM57Q8N5G2 664 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 CLEC11AQ9Y240 323 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 LDHCP07864 332 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 ABCF2Q9UG63 623 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 VWDEQ8N2E2 1590 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 ZGPATQ8N5A5 531 aaKnown RBP6.18□□□□□ -1.42
PHF3-210ENST00000509876 PHACTR3Q96KR7 559 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 H3BQV1 296 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 IFFO2Q5TF58 517 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 PLBD2Q8NHP8 589 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 C3P01024 1663 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 IRS4O14654 1257 aaPredicted RBP6.18□□□□□ -1.42
PHF3-210ENST00000509876 USP5P45974 858 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 MAP3K12Q12852 859 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 GPR162Q16538 588 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 CSPP1Q1MSJ5 1256 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 NOL8Q76FK4 1167 aaKnown RBP6.18□□□□□ -1.42
PHF3-210ENST00000509876 NLGN1Q8N2Q7 840 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 CRACR2BQ8N4Y2 399 aaPredicted RBP6.18□□□□□ -1.42
PHF3-210ENST00000509876 CPSF1Q10570 1443 aaKnown RBP6.18□□□□□ -1.42
PHF3-210ENST00000509876 TTF1Q15361 905 aaPredicted RBP6.18□□□□□ -1.42
PHF3-210ENST00000509876 LRRFIP2Q9Y608 721 aaKnown RBP6.18□□□□□ -1.42
PHF3-210ENST00000509876 TMEM131LA2VDJ0 1609 aa6.18□□□□□ -1.42
PHF3-210ENST00000509876 IDH1O75874 414 aaKnown RBP6.17□□□□□ -1.42
PHF3-210ENST00000509876 ALDH1B1P30837 517 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 AIDAQ96BJ3 306 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 DDX21Q9NR30 783 aaKnown RBP eCLIP6.17□□□□□ -1.42
PHF3-210ENST00000509876 PER1O15534 1290 aaPredicted RBP6.17□□□□□ -1.42
PHF3-210ENST00000509876 OGFOD1Q8N543 542 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 ANXA1P04083 346 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 UQCRFS1P1P0C7P4 283 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 NF2P35240 595 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 ATP2B2Q01814 1243 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 ARHGAP45Q92619 1136 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 LGR6Q9HBX8 967 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 PIP4K2AP48426 406 aaPredicted RBP6.17□□□□□ -1.42
PHF3-210ENST00000509876 TDO2P48775 406 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 SOGA3Q5TF21 947 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 DNAJC10Q8IXB1 793 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 CDK12Q9NYV4 1490 aaPredicted RBP6.17□□□□□ -1.42
PHF3-210ENST00000509876 LOC102724428A0A0B4J2F2 783 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 SIK1P57059 783 aa6.17□□□□□ -1.42
PHF3-210ENST00000509876 BRMS1Q9HCU9 246 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 CTNNA3Q9UI47 895 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 XBP1P17861 261 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 ZC3H12CQ9C0D7 883 aaKnown RBP6.16□□□□□ -1.42
PHF3-210ENST00000509876 IGSF1Q8N6C5 1336 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 NRXN1Q9ULB1 1477 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 GOLGA6L6A8MZA4 724 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 GRM8O00222 908 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 BAG3O95817 575 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 POLR3DP05423 398 aaPredicted RBP6.16□□□□□ -1.42
PHF3-210ENST00000509876 EIF6P56537 245 aaKnown RBP6.16□□□□□ -1.42
PHF3-210ENST00000509876 PTPRUQ92729 1446 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 PTMSP20962 102 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 LINS1Q8NG48 757 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 RRP12Q5JTH9 1297 aaKnown RBP6.16□□□□□ -1.42
PHF3-210ENST00000509876 SLC27A3Q5K4L6 730 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 MSL1Q68DK7 614 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 USP31Q70CQ4 1352 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 NEURL4Q96JN8 1562 aa6.16□□□□□ -1.42
PHF3-210ENST00000509876 ARHGAP23Q9P227 1491 aa6.15□□□□□ -1.42
PHF3-210ENST00000509876 SH3TC1Q8TE82 1336 aa6.15□□□□□ -1.42
PHF3-210ENST00000509876 MPHOSPH10O00566 681 aaKnown RBP6.15□□□□□ -1.42
PHF3-210ENST00000509876 C8orf58Q8NAV2 365 aa6.15□□□□□ -1.42
PHF3-210ENST00000509876 ERBB4Q15303 1308 aa6.15□□□□□ -1.42
PHF3-210ENST00000509876 CCDC191Q8NCU4 936 aa6.15□□□□□ -1.42
PHF3-210ENST00000509876 MTMR7Q9Y216 660 aa6.15□□□□□ -1.42
PHF3-210ENST00000509876 TECPR2O15040 1411 aa6.15□□□□□ -1.42
PHF3-210ENST00000509876 SOS2Q07890 1332 aaPredicted RBP6.15□□□□□ -1.43
PHF3-210ENST00000509876 MRPL50Q8N5N7 158 aaKnown RBP6.15□□□□□ -1.43
PHF3-210ENST00000509876 SPRYD3Q8NCJ5 442 aa6.15□□□□□ -1.43
PHF3-210ENST00000509876 CCDC43Q96MW1 224 aaKnown RBP6.15□□□□□ -1.43
PHF3-210ENST00000509876 KIAA1210Q9ULL0 1709 aa6.15□□□□□ -1.43
PHF3-210ENST00000509876 HLA-DOAP06340 250 aa6.15□□□□□ -1.43
PHF3-210ENST00000509876 SAFBQ15424 915 aaKnown RBP eCLIP6.15□□□□□ -1.434e-8■□□□□ 8.4
PHF3-210ENST00000509876 IL1RAPL2Q9NP60 686 aa6.15□□□□□ -1.43
PHF3-210ENST00000509876 METTL22Q9BUU2 404 aaPredicted RBP6.15□□□□□ -1.43
PHF3-210ENST00000509876 IL15P40933 162 aaPredicted RBP6.14□□□□□ -1.43
PHF3-210ENST00000509876 CRKLP46109 303 aaKnown RBP6.14□□□□□ -1.43
PHF3-210ENST00000509876 FAM182BQ5T319 152 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 BARGINQ6ZT62 677 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 PALLDQ8WX93 1383 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 NCAPD2Q15021 1401 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 PDE8AO60658 829 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 GLRX3O76003 335 aaKnown RBP6.14□□□□□ -1.43
PHF3-210ENST00000509876 C2CD5Q86YS7 1000 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 NSFL1CQ9UNZ2 370 aaKnown RBP6.14□□□□□ -1.43
PHF3-210ENST00000509876 CHD1LQ86WJ1 897 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 NUTM1Q86Y26 1132 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 ZNF496Q96IT1 587 aaPredicted RBP6.14□□□□□ -1.43
PHF3-210ENST00000509876 SPATA31A1Q5TZJ5 1347 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 SF3A1Q15459 793 aaKnown RBP6.14□□□□□ -1.43
PHF3-210ENST00000509876 DPP8Q6V1X1 898 aaPredicted RBP6.14□□□□□ -1.43
PHF3-210ENST00000509876 GGA1Q9UJY5 639 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 WWC3Q9ULE0 1092 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 BCS1LQ9Y276 419 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 MST1RQ04912 1400 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 A1BGP04217 495 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 LMBR1LQ6UX01 489 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms